KEGG   Cyprinodon tularosa (White Sands pupfish): 119786220
Entry
119786220         CDS       T07496                                 
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
ctul  Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:ctul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ctul03019]
    119786220 (zc3h12b)
Messenger RNA biogenesis [BR:ctul03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     119786220 (zc3h12b)
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C zf-CCCH_2 zf-CCCH_4 UBA_N4BP1_C
Other DBs
NCBI-GeneID: 119786220
NCBI-ProteinID: XP_038145341
LinkDB
Position
Unknown
AA seq 852 aa
MTAWSMVEKLKMEKRPCREQNIDSREAQHATDESEEGSSSESESEEQWQHQQQPYRAQLG
NNSNSCRRREPLALTKPHRQLCRSPCLDRPSFSQSSTLQDVRDDDSGALHGTKATSEKEY
QTKMEFALKLGYSGDQVETVLNKLGAAALINDVLAELVRLGNKAEHEAPPSSSTATPISR
SPCVKETVSPEASVEEESVDMYDNLRPIVIDGSNVAMSHGNKEVFSCRGIQLAVEWFREK
GHKDITVFVPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIV
KLAYDSDGIIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLEN
FLRKKPVVPEHKKQPCPYGKKCTYGHKCKYYHPERVNQPQRSVADELRAFAKLSAVKTMS
EGALAKCGTGPAVVKGDISSEAKRVAPKRQSDPSIRSVACEPPEALSVARKSETNSVPSL
VSALSVPTMQPAKSHAAGALNTRSASSPVPGSLQFAHNSLEHMSSIQYPPILVTNSHGAS
VTYSEQFPKYDSVSDHGYYSLHSDFSNMSMSSMHNVDSFCSMEHEHVYQRTPSHCPESCL
SHSNSDSFSSYGDLYPSSVDSSLEESIKGQQQAPAQARMQAFSHGFRHEALSRVQSYGQE
EPKQAPRKQAGGHLAPHIQHAAVGARSSCPGDYPLTQNILPPLSSQPTRSLGMTRMDSIS
DSRLYDSNPNRQRRPPLCREQHASWDPLPCGNESYGYHSYPLSNSLMPCCERVMVRSMPD
KMEQIWNSPWENPSAAEHQERYVIPDHQYQTYRNLCNIFPAYVVHSVMEKNPHLTDPQQL
AAVIVTKLRSCH
NT seq 2559 nt   +upstreamnt  +downstreamnt
atgacagcatggtccatggtggagaagctcaaaatggaaaaacgcccatgcagggagcag
aacattgactcaagagaggcccagcatgccacagacgagtctgaggaaggaagcagctcc
gaaagcgaatcggaagagcagtggcaacaccagcagcagccctatagggcccagttgggc
aacaacagcaacagctgcaggaggagagagcctctggccctcaccaagcctcaccgccag
ctatgccgctccccatgcctcgaccgacccagcttttcccaaagcagcaccctgcaagac
gtccgcgatgacgactccggcgccctgcatgggaccaaagccaccagcgaaaaggagtac
caaaccaagatggagtttgctctgaagctgggctattctggagatcaggtggaaacggtg
ctcaataagctgggggcggcggcactcattaatgacgttcttgcagagttggttcgcctc
gggaataaagcagagcacgaagctccacccagcagcagcacagctacacccatatcacgg
tccccctgtgttaaagagactgttagccctgaagcttcggttgaggaagaatctgtggat
atgtatgacaacctcagacctatcgtcatcgatgggtcgaacgtggcaatgagccacggg
aacaaagaggttttctcttgtcgcggtatccagcttgcagtcgagtggtttcgggagaaa
ggacacaaagacatcactgtgtttgtccccgcatggagaaaggagcagtcaaggccggac
gccctcattacagatcaagaaattttgcgcaagttggagaaagagaaaatcctggttttt
accccgtctcgaagagttcagggccggagagtggtgtgctatgacgatcgcttcatagtg
aagctggcttatgattctgatggaattattgtgtcaaatgacaactacagagacttgcag
aacgagaagccggagtggaaaaaatttatagaggagcgcctcctgatgtattcatttgtc
aatgacaagtttatgccgcctgatgatccgttgggaagacacgggccgagcttagaaaac
ttcctccgaaagaagcctgtcgttccagagcacaaaaagcaaccctgcccctatggtaaa
aagtgcacatatggacacaagtgcaagtactatcatccagagcgcgtgaaccagccgcag
cggtccgtggccgacgagctgcgagcctttgccaagctgtcagctgtaaaaacgatgagt
gagggggctttagctaaatgtgggacgggtccggcagttgttaagggggacatcagctcg
gaagccaaacgagtggcgcccaaacgccagtctgatcccagcattcgctccgtggcctgt
gaacctccagaggcgctctctgttgctcggaagtccgagacgaattcagtgccttccctt
gtgtctgctctcagcgttcccaccatgcagcctgccaagagccacgcagctggggcttta
aacacacggtcagccagcagccccgttccaggctctctgcagtttgcgcacaactctcta
gagcacatgtctagtatacagtacccccccattttagtgaccaacagtcacggcgcctct
gtgacgtacagtgaacagttcccaaagtatgactccgtcagcgatcacggatactactcg
ctccacagcgatttttcaaacatgagcatgagcagcatgcacaacgtggacagtttctgt
agcatggagcacgagcacgtgtatcagagaactcccagccactgccctgaatcctgcctc
agtcattccaacagtgactcgttctcctcctacggggacctgtaccctagctctgtggac
agcagcttggaggagagcatcaaagggcagcagcaggctccggcgcaggcgaggatgcag
gctttctcccacgggtttcgccacgaagccctgagcagagttcagagttacggacaagag
gagccgaagcaagctccccgtaagcaggccgggggacacctagcgcctcatatccagcat
gcggcggtgggagcccgctccagctgtccaggagactaccccctcactcaaaacatcctc
ccacctttgtcctcacagccaacgcgatctctaggtatgacccgtatggacagcatatcg
gactccaggttgtacgacagcaacccgaatagacagaggcgaccgccgctctgccgcgag
cagcatgccagctgggacccgttgccgtgtggcaacgagtcctacggatatcattcatac
ccgcttagcaacagcctgatgccttgctgcgagcgggtgatggtccgcagcatgccagac
aaaatggaacaaatctggaactcaccgtgggagaacccatctgcggctgagcaccaagag
cggtacgtcattccagatcaccagtatcagacatacaggaacctttgtaacatctttcct
gcatacgttgtccactcggtcatggaaaagaacccgcatttaacagacccgcaacagctt
gcagctgtcatcgttacaaaactgaggtcgtgccactga

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