Entry |
|
Symbol |
zc3h12b
|
Name |
(RefSeq) probable ribonuclease ZC3H12B
|
KO |
K18668 | ribonuclease ZC3H12 [EC:3.1.-.-] |
|
Organism |
ctul Cyprinodon tularosa (White Sands pupfish)
|
Brite |
KEGG Orthology (KO) [BR:ctul00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:ctul03019]
119786220 (zc3h12b)
Messenger RNA biogenesis [BR:ctul03019]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
119786220 (zc3h12b)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
852 aa
MTAWSMVEKLKMEKRPCREQNIDSREAQHATDESEEGSSSESESEEQWQHQQQPYRAQLG
NNSNSCRRREPLALTKPHRQLCRSPCLDRPSFSQSSTLQDVRDDDSGALHGTKATSEKEY
QTKMEFALKLGYSGDQVETVLNKLGAAALINDVLAELVRLGNKAEHEAPPSSSTATPISR
SPCVKETVSPEASVEEESVDMYDNLRPIVIDGSNVAMSHGNKEVFSCRGIQLAVEWFREK
GHKDITVFVPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIV
KLAYDSDGIIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLEN
FLRKKPVVPEHKKQPCPYGKKCTYGHKCKYYHPERVNQPQRSVADELRAFAKLSAVKTMS
EGALAKCGTGPAVVKGDISSEAKRVAPKRQSDPSIRSVACEPPEALSVARKSETNSVPSL
VSALSVPTMQPAKSHAAGALNTRSASSPVPGSLQFAHNSLEHMSSIQYPPILVTNSHGAS
VTYSEQFPKYDSVSDHGYYSLHSDFSNMSMSSMHNVDSFCSMEHEHVYQRTPSHCPESCL
SHSNSDSFSSYGDLYPSSVDSSLEESIKGQQQAPAQARMQAFSHGFRHEALSRVQSYGQE
EPKQAPRKQAGGHLAPHIQHAAVGARSSCPGDYPLTQNILPPLSSQPTRSLGMTRMDSIS
DSRLYDSNPNRQRRPPLCREQHASWDPLPCGNESYGYHSYPLSNSLMPCCERVMVRSMPD
KMEQIWNSPWENPSAAEHQERYVIPDHQYQTYRNLCNIFPAYVVHSVMEKNPHLTDPQQL
AAVIVTKLRSCH |
NT seq |
2559 nt +upstreamnt +downstreamnt
atgacagcatggtccatggtggagaagctcaaaatggaaaaacgcccatgcagggagcag
aacattgactcaagagaggcccagcatgccacagacgagtctgaggaaggaagcagctcc
gaaagcgaatcggaagagcagtggcaacaccagcagcagccctatagggcccagttgggc
aacaacagcaacagctgcaggaggagagagcctctggccctcaccaagcctcaccgccag
ctatgccgctccccatgcctcgaccgacccagcttttcccaaagcagcaccctgcaagac
gtccgcgatgacgactccggcgccctgcatgggaccaaagccaccagcgaaaaggagtac
caaaccaagatggagtttgctctgaagctgggctattctggagatcaggtggaaacggtg
ctcaataagctgggggcggcggcactcattaatgacgttcttgcagagttggttcgcctc
gggaataaagcagagcacgaagctccacccagcagcagcacagctacacccatatcacgg
tccccctgtgttaaagagactgttagccctgaagcttcggttgaggaagaatctgtggat
atgtatgacaacctcagacctatcgtcatcgatgggtcgaacgtggcaatgagccacggg
aacaaagaggttttctcttgtcgcggtatccagcttgcagtcgagtggtttcgggagaaa
ggacacaaagacatcactgtgtttgtccccgcatggagaaaggagcagtcaaggccggac
gccctcattacagatcaagaaattttgcgcaagttggagaaagagaaaatcctggttttt
accccgtctcgaagagttcagggccggagagtggtgtgctatgacgatcgcttcatagtg
aagctggcttatgattctgatggaattattgtgtcaaatgacaactacagagacttgcag
aacgagaagccggagtggaaaaaatttatagaggagcgcctcctgatgtattcatttgtc
aatgacaagtttatgccgcctgatgatccgttgggaagacacgggccgagcttagaaaac
ttcctccgaaagaagcctgtcgttccagagcacaaaaagcaaccctgcccctatggtaaa
aagtgcacatatggacacaagtgcaagtactatcatccagagcgcgtgaaccagccgcag
cggtccgtggccgacgagctgcgagcctttgccaagctgtcagctgtaaaaacgatgagt
gagggggctttagctaaatgtgggacgggtccggcagttgttaagggggacatcagctcg
gaagccaaacgagtggcgcccaaacgccagtctgatcccagcattcgctccgtggcctgt
gaacctccagaggcgctctctgttgctcggaagtccgagacgaattcagtgccttccctt
gtgtctgctctcagcgttcccaccatgcagcctgccaagagccacgcagctggggcttta
aacacacggtcagccagcagccccgttccaggctctctgcagtttgcgcacaactctcta
gagcacatgtctagtatacagtacccccccattttagtgaccaacagtcacggcgcctct
gtgacgtacagtgaacagttcccaaagtatgactccgtcagcgatcacggatactactcg
ctccacagcgatttttcaaacatgagcatgagcagcatgcacaacgtggacagtttctgt
agcatggagcacgagcacgtgtatcagagaactcccagccactgccctgaatcctgcctc
agtcattccaacagtgactcgttctcctcctacggggacctgtaccctagctctgtggac
agcagcttggaggagagcatcaaagggcagcagcaggctccggcgcaggcgaggatgcag
gctttctcccacgggtttcgccacgaagccctgagcagagttcagagttacggacaagag
gagccgaagcaagctccccgtaagcaggccgggggacacctagcgcctcatatccagcat
gcggcggtgggagcccgctccagctgtccaggagactaccccctcactcaaaacatcctc
ccacctttgtcctcacagccaacgcgatctctaggtatgacccgtatggacagcatatcg
gactccaggttgtacgacagcaacccgaatagacagaggcgaccgccgctctgccgcgag
cagcatgccagctgggacccgttgccgtgtggcaacgagtcctacggatatcattcatac
ccgcttagcaacagcctgatgccttgctgcgagcgggtgatggtccgcagcatgccagac
aaaatggaacaaatctggaactcaccgtgggagaacccatctgcggctgagcaccaagag
cggtacgtcattccagatcaccagtatcagacatacaggaacctttgtaacatctttcct
gcatacgttgtccactcggtcatggaaaagaacccgcatttaacagacccgcaacagctt
gcagctgtcatcgttacaaaactgaggtcgtgccactga |