Cyprinodon tularosa (White Sands pupfish): 119786451
Help
Entry
119786451 CDS
T07496
Symbol
neo1a
Name
(RefSeq) neogenin 1a isoform X1
KO
K06766
neogenin
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04350
TGF-beta signaling pathway
ctul04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
119786451 (neo1a)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119786451 (neo1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ctul04515
]
119786451 (neo1a)
Cell adhesion molecules [BR:
ctul04515
]
Immunoglobulin superfamily
DCC/UNC5 family
119786451 (neo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
NDNF
fn3_2
C2-set_2
Tissue_fac
Ig_4
Sp38
V-set_CD47
EphA2_TM
DUF4834
DUF4912
Motif
Other DBs
NCBI-GeneID:
119786451
NCBI-ProteinID:
XP_038145722
LinkDB
All DBs
Position
Unknown
AA seq
1509 aa
AA seq
DB search
MAERGAVPLLSLLCLTFLFTQTTAAKHVDKGSAAQPFVPFRFTVEPQDTLAIRGNSALLN
CSAHSDEDTPARIEWKKDGTFMSLVSDERRRILPDGSLFFTHVVHSKHNKPDEGTYQCVA
TIENLGSISSRTSRLEVAGIPRFASQPSPASVHIGDSQVVACEVNSDLVPFTRWEKDKEA
LEMSDRLIQLPSGALVISNASEADAGLYRCVVENVGSSKSSEEALLQTIPETGGERKLEF
LVQPASVTKLLGANVLLPCVVSGYPVPHIRWMLGDKVLEESDGRVEMVAGGSLQISNVTE
EDAGIYTCLAENSNATVEAQAQLTVQVPPQFVKRPANIYAHESMDIIFECKVSGSPAPTV
KWVKNGDAVIPSDYFKIIKEHNLQVLGLVKSDEGFYQCLAENDAGNIQSSAQLIILDHDV
ALPAFPPPSLTPNTTDHVTAGSGGIAAPAGPTPSAPRDVVASLVSTRFIKLTWRQPAEPH
GDELTYSVFYSQEGTSRERMVNTSRPGEMQVTIQNLMPDTKYRFRVVPHNSNGQGESSAA
LKVATQAEVQVPGPAPNLQAVSNTPTSVSLSWDKPLTGNGEILSYKLYYTDRSIGTEEDV
DIDGQSYTMAGLKKNTEYSFRVVANNKHGPGVSTEDVIVRTLSDVPSAPPQNLTLEVQNS
KSIMVRWQPPPLSGQNGEITSYKIRYRKVSRRSESAVTTAGTELFKLIDGLEPGTEYSFR
VSAVTVNGTGPATEWVPAETFESDLDETRVPDQPSSLHVRPLVNSIVVSWTPPENQDIVV
RGYTISYGIGSPHAQTIKVDHKQRYYTIENLNSGSHYVITLKAFNNVGEGIPVYESAATR
VQSDPIDPDVDLYELFHAQYTPAPDPSPMMPPVGVQASVLSHDTIRVTWADNSLPKNQKI
TDNRHYTVRWKTNIPANTKVKMANSTSLNHVVTGLKPNTLYEFSVMVTKGRRSSTWSMTA
QGTTFETTPGSAPKDVTVVSKENKPRTIIVNWQPPSEANGKITGYIIYYSTDVNAVVHDW
VIEPVVGNRLTHQIQELTLDTTYYFKIQARNSKGMGPMSEAVQFRTPKTESSDKMANDQA
SNLPPKPGSPSNIFPEDPRGTVGKTGVGGGEHHILIIVVIIAVGVFTIIVVVVGALLCTR
RSTSQQKKKRAASKSSNSSHKYKGNSKDLKPPDLWIHHERLELKPMDKSPDPNPVMTETP
IPRTSQDITPADSGMESNPHLQQRRNSYRGHESDESMSTLAGRRGMRPKMMMPFDAQPPQ
PVISAHPIHSLDNHHHHYHMGSLVSPTRGYLYHQGSGHPRPHACTTPISHLERVDSSESV
RNTPSSEPLPPPTASSQVSCPSEIMADPEGSYHGSTTTEEEPSYSSNLPPHRPAHPHALA
HPLKSFAVPAIPVSSHPSYDSPALPSMPLLAQTGPPSHPHVVKTASIGTLGRTRTPMIVT
VPNAPDVPETSKMLEDVDSVLASLPPCPSPAPRSNPVPLPQSYEPDELTEEMAHLEGLMK
DLNAITTAP
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcggggagccgtgccgctcctctctctcctctgtctcacctttctcttcacg
cagaccaccgcggcaaagcatgtcgataaaggctcagcagcccagcccttcgtccccttc
aggttcacggtggagccccaggacacgctggccatccgggggaactcggcgctgctcaac
tgctcggcacacagcgacgaggacacgccggcgcgcatcgagtggaagaaggacggcacc
ttcatgagcctggtttcagacgagaggcggcgcatcctcccggacggctcgctgttcttc
acgcacgtcgtccactcgaagcacaacaagcccgatgagggcacctaccagtgcgtggca
accatcgagaacctgggatccatttccagccgcacgtcacgcctcgaagtagcagggatt
ccaaggttcgccagtcagccgtctccagcctccgtgcatatcggggacagccaagtggtg
gcgtgtgaggtaaactcagacctggtgcctttcacccgctgggagaaggacaaggaagcg
ttggaaatgagcgacagattgatccagctgcccagcggggctctcgttatcagcaacgcc
tcggaggccgatgccggcctgtatcgctgtgttgtggaaaacgtgggttcctccaagtcc
agtgaggaggccctgctccagacgataccagaaaccggaggagagaggaagctggagttt
ctggtacagcctgcctctgtgaccaagctgctgggtgccaatgtgctgctgccatgtgtg
gtctcaggttatcctgtacctcacatccgctggatgcttggagacaaagtgctggaggaa
agcgatggtcgtgtagaaatggtggcaggtgggagcctccagatttccaacgtcacggag
gaagatgccggaatttacacctgcttggccgagaactccaacgccaccgtcgaagcccag
gcacagctcacagttcaagttcctcctcagtttgtcaaacggccggccaacatttacgcc
catgagtccatggacatcatctttgagtgtaaggtttccggttcgcccgctcccaccgtc
aaatgggtcaagaatggagacgccgtcatccccagtgactacttcaaaataattaaggag
cacaacctgcaggttctgggtctggtcaagtccgatgaaggtttctaccagtgtctggca
gagaacgatgccggcaacatccagtcgagcgcgcagctcatcatcttggatcacgacgta
gccctgcccgccttccctcccccttcactgactcctaacactactgaccatgtaacagca
ggctctggaggcatagccgccccagcggggcccaccccctctgcgccgcgagacgtcgtg
gcctccctggtctccacccgcttcatcaagctgacctggcgccagccggcggagccgcac
ggagatgagctgacctactctgtgttctacagtcaggagggcaccagcagggagcgaatg
gtgaacaccagccgaccaggagagatgcaagtcaccatccagaatctgatgccagacacc
aaatatcgcttcagggtggtgccacacaacagcaacgggcagggcgagagctcagcagcg
ctcaaagtggccacccaagctgaagtacaagtccctggtccagctcccaacctgcaggca
gtgtccaacactccgacgtccgtctcccttagctgggataaaccactcacaggcaacgga
gagatcctctcatacaagctctactacacagacagaagtatcggtaccgaagaggatgtt
gacatcgatggtcagtcatacaccatggctggactgaagaagaacacagagtacagcttc
cgtgtggtggctaataacaagcacggtcccggggtctccacagaggatgtcattgttcgg
acgctttctgatgttccaagcgcccctccccaaaacctcacattggaagttcagaactcg
aagagtatcatggttcggtggcagcctcctccgctcagtggccagaacggggaaatcacc
agctacaagatccgctaccgtaaagtttcccggaggagcgaatcagctgtgaccacagca
ggaactgagcttttcaagctcattgatggtctggagcctgggaccgagtactccttccga
gtttccgctgtgactgtaaacgggacgggaccagccaccgagtgggtcccagcagagacg
tttgagagcgacctggatgaaacccgtgtgccggaccaacccagctcgctccacgtccgc
ccgctggtcaacagcatcgtagtgagctggacgccaccagagaaccaggacatcgtggtg
cggggctacaccatcagctacggcatcggaagtccccacgctcagaccatcaaagtggac
cacaagcagcgctactacaccattgagaacctcaactccggttcccattatgtgatcacg
ctgaaggccttcaacaatgtgggggaggggatccctgtgtacgagagcgcagccaccagg
gtgcagtcagaccccatagaccccgatgttgacttgtacgaactgttccatgcccaatac
accccagcaccagaccccagccccatgatgcctcccgtgggcgtgcaggcctccgtgctg
agccatgacaccatcagggtgacgtgggctgacaactcgctgcctaagaaccagaagatc
acagataaccgccactacacggtgcgatggaagaccaacatcccagccaatactaaagta
aagatggctaacagcaccagcctgaaccacgtagtgacaggtctgaagccgaacacgctc
tacgagttctccgtcatggtgaccaagggacgccgctccagcacatggagcatgacagct
caaggaaccacctttgaaaccacccccggctctgctccaaaagatgtgaccgtcgtgagc
aaagagaataaacctcgcaccataatagtgaactggcagcctccgtctgaagctaatgga
aaaattacaggttacattatctactacagcacagacgtaaacgcagtggtccacgactgg
gtcattgagcctgtggtggggaaccgcctcacgcaccagatccaggagctgacgctggac
acaacgtactacttcaagatccaggccaggaactccaaaggaatggggcccatgtcggag
gccgttcagttccgaactcccaagactgaatcctctgacaaaatggctaatgaccaagct
tcaaatctgccaccaaagcctggatctccaagcaacatctttccagaggaccctagaggt
acagttggtaaaacaggtgtcgggggtggtgaacatcatatcctgatcatcgtcgtcata
atcgcagtaggagtcttcaccatcatagtggttgtggtcggagccttgctgtgcacacgg
cgcagcacgtcccagcagaagaagaagcgagctgcgtcaaagtcatcaaacagctcccat
aaatacaaaggaaattctaaagacctgaagccgccagatctttggattcaccacgagagg
ctggaactgaaacctatggacaagtcgccggatcccaaccccgtcatgaccgagacgccc
atccctcgcacctcacaggacatcacgccagccgacagcggaatggagagcaacccccac
ctgcagcagaggcgcaactcctacagaggccacgaatcagacgagagcatgtccacacta
gcaggtcgccgagggatgaggcctaaaatgatgatgccttttgacgcacagccacctcag
cctgtgattagtgctcatcccatccattccctcgataaccatcatcaccattatcacatg
ggcagcctggtatcaccgacacgcggctacctctaccatcaaggcagcgggcaccctcgc
ccgcacgcctgcaccacccccatctcccatttagaaagggtggactcctcagaatctgtg
aggaacacccccagctcggagcccctccctccacctacagcatcttcccaagtctcctgc
ccctctgagatcatggctgacccagagggcagctaccacggctccaccaccaccgaggaa
gagcccagctactccagcaacctgcccccacatcgcccagcccacccgcatgcccttgcc
caccccctcaagagctttgctgtacctgcaatcccagtctccagccatccctcatacgac
tcccccgccttacccagcatgcccctgcttgctcagactgggcctccctctcacccccat
gttgtaaaaacagcctccatcggaacactaggaaggacacgcactccaatgatagtaaca
gtacccaacgcccctgatgtaccagaaacaagcaaaatgctggaggatgtagacagcgtg
cttgcctccctccccccctgcccctccccagcccctcgcagtaaccctgttcctctccct
cagagctacgagcctgacgagctgaccgaggagatggcgcacctcgagggcctgatgaaa
gacctgaacgccatcacaacagcgccatga
DBGET
integrated database retrieval system
