Cyprinodon tularosa (White Sands pupfish): 119786525
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Entry
119786525 CDS
T07496
Symbol
dhx34
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34 isoform X1
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctul03019
]
119786525 (dhx34)
Enzymes [BR:
ctul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119786525 (dhx34)
Messenger RNA biogenesis [BR:
ctul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
119786525 (dhx34)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_DHX34
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
AAA_16
ResIII
Motif
Other DBs
NCBI-GeneID:
119786525
NCBI-ProteinID:
XP_038145891
LinkDB
All DBs
Position
Unknown
AA seq
1148 aa
AA seq
DB search
MDGGRGREGRSWDWNNPHCRAQMDQIFFREQDYIQTGSSEHKEFWNFFDRFQRFKAKREM
SGSGTRDEVKEKKKSGTEKVNLGLPTEYDPRYRINLSLCSADIEKRMGKTDPRGRQRSSG
PGPQEITDCRLALLHFLDFSQKQSFGKLAKLRRDQKNLPIFQYRDRIVDLVRLHPVVVVA
GDTGCGKSTQVPQYLLSAGFSQIACTQPRRIACISLAKRVSFESLNQYGSKVGYQIRFET
SRTAATKLLFLTEGLLLRQIQQDKTLDQYQVVIVDEVHERHLHCDFLLGVLRSLLADRPG
LRLILMSATINIKLFSEYFHSAPVLQVPGRLFPIQVIYQPIPPEEQPSRSEKLDPRPYLR
ILQGIDQRYPPEERGDLLLFLSGVAEISTIQEACQVYATHTRRWIVLPLHSTLSLAQQDK
VFDVAPPGVRKCIISTNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEFWISRAS
SEQRKGRAGRTGPGVCYRLYSESDYNAFAPYPVPEIHRVALDSLVLQMKSMDLGDPLSFV
FIDPPPTASIQTAVTYLKEQGALDSHGELTSIGRLLAQLPVDVVIGKMLVLGSLFNLVEP
VLTVAAALSVQSPFLRSSQQNPDCNTARQPLHSNQGDPFTLLNTFNAWVEVKGERGGGSR
KWCRRRGLEEQRLYEMVNLRRQFKELLRSHGLIESEDKAPSGGDREQRRERFTERKKLHQ
LKRHHEQQEGTKRKVLRLEEGQDGEISSGSDTEGRGRGRKGKEGKEQDVDIQEVKFKLRH
NVSELQEAVNNSQDLSSRHQGLLKLLLCRGLYPQLALPDEHNSNRKDSEQVFHTRNKHGV
VIHPTSVFASDPEVLHVPEGDARETGPDRRDSCKHQLLAFVTLLETNKPYLSNCVRVPAL
QALLLVANSVDTNADCTRLVVDGWLELEVKEPEEALRVLSTSLSLRSEWERLLKAQLGQS
SLKDSSGQGVSRRDMEKLSDGLVRFLLYTEVNYSLQRLTAFQTQNLYIGPQSEADPSFSV
VPDLSPLFPGAEAKPDPIKGGLRVTSFFTYNCLADSKDLYSECLRTFWSCPNCELYMPLT
PLERMHHEASCRPAGEQQEAGESEGGKAGSSSASGLTRVYHCDVCNEDLKLTSTEILKHK
RQHMFSAK
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggacgggggtagaggaagagagggtcggagctgggactggaataacccgcactgcaga
gcacagatggatcagatatttttccgtgaacaggactacatccagaccggatcctccgaa
cacaaggaattctggaatttctttgatcgtttccagcggtttaaagctaagagggaaatg
tctggttctggaaccagagacgaagttaaagaaaagaaaaaatctggcaccgaaaaggtg
aatttgggacttccaacagagtacgaccctcggtaccggatcaatctatctctgtgttca
gcggacattgaaaagcgaatgggaaaaacggatcccagaggcaggcagagatcctcaggt
ccaggtccacaggagatcacagactgccgattggctctgttgcatttcctggacttcagc
cagaagcagagctttgggaaactggccaagcttcgcagggaccaaaagaacctgcctatc
tttcagtaccgagatcggattgtggatctggttcggcttcacccagtggtagtggtggcg
ggggacacgggctgtgggaaatccacacaggtgccacaatatttgctctcggctggcttt
agccaaatcgcctgcacccagcccaggcggatcgcatgcatttccctcgcaaagagagtc
agctttgagagcctcaatcagtatggatcaaaggttggttatcagatccgctttgagact
tctcggactgcggccaccaagctgctcttcctgaccgaaggtctgctgctgcgacagatc
cagcaggataagactctggatcagtaccaggtggtgatcgtggatgaggttcatgagcga
cacctccactgtgacttcctccttggggtcctacgctctctgcttgctgaccgcccaggc
ctccgtctcatcctcatgtcagccaccatcaacatcaagctcttctctgaatacttccac
agcgctcctgtgctgcaggtaccagggagactgtttcctattcaggtgatttaccagccc
attccccctgaggagcagccatcgcgttcagagaaactggatcccagaccgtacctgcgc
atccttcagggcatcgaccagcgttaccctccagaggagcgtggggacctgctcctcttc
ctcagcggcgtggcagagatttccaccatccaggaggcctgtcaggtttacgccacgcac
accaggcgctggatagtcttaccactgcacagcaccctctctctcgctcaacaggacaag
gtgtttgacgttgctcctcctggcgtcagaaagtgcatcatctctaccaacattgcagag
acctcagttacaatagacggggtccggtttgttgtggactcaggaaaggtgaaggaaatg
agctttgacccgaaggccaagatgcagcgtctgcaggagttctggatcagccgagccagc
tctgagcagaggaaaggtagagctggccgtacaggtcctggtgtttgttaccgtctctat
tcagagtccgactacaatgcctttgctccgtatcctgtgcctgaaatccacagagtggct
ctggactccttggttctgcagatgaagagtatggatcttggggatcctctttcttttgtc
ttcatcgatcctccaccaactgccagtatccagactgcagttacatacctgaaggagcag
ggggcactagacagtcatggtgaactaacatctattggtagactgttggctcagctgcct
gtcgatgttgttataggaaagatgttggtgctgggctccctgttcaacctggtggagccg
gttctgaccgttgcagcagccctcagcgttcagtcaccattcctgcgcagctcgcagcaa
aacccggactgcaacactgcccgccagcccctgcacagcaaccagggagaccctttcact
ctgcttaacaccttcaacgcctgggtggaagtgaaaggagagagaggaggcgggtccagg
aagtggtgcaggaggagaggcctggaggagcagagactttatgagatggtcaacctacgc
agacagttcaaggaattgctgaggagccacggcctcattgagtcagaggacaaggctccc
tctggtggcgaccgtgagcagcgcagggagaggttcacagagaggaagaagctgcatcag
ttgaaaagacaccatgagcagcaggaggggactaaacgtaaggtcctaaggctggaggag
ggccaggatggagagatctcctcaggatcagacacagagggcagaggcagaggcaggaag
ggcaaggagggaaaagaacaggatgtggacatccaggaagtgaagtttaaattacgtcac
aacgtctcggagctccaggaggccgtcaacaacagccaggacttgtcgtcgcggcaccaa
ggtttgctgaagctgctgctctgccgaggactctaccctcagctggctctacctgatgag
cacaactccaaccgcaaagactcagagcaggtgtttcacacaaggaacaagcatggcgtg
gtgatccacccgaccagtgtgttcgccagcgatccagaggtgctgcatgttcctgagggc
gacgccagagaaacaggacctgacaggagggacagctgcaaacatcagctcttggccttc
gtcacgctgctggagaccaacaaaccgtatttgtccaactgtgttcgggtgccagctctg
caggctctgctactggtggccaactctgtggataccaacgctgactgcacccggctggtg
gtggacggctggctggagctggaagtgaaggagcccgaggaggccctgagggtcctgtcc
acatccttgagtctcaggtccgagtgggagcgtctgctgaaggcccagctgggacagagc
tcattgaaggactcctcaggccaaggagtgtctcgcagagacatggagaagctgagcgac
ggcctggtccgcttcctgctctacactgaggtcaattacagccttcagcgcctcactgct
ttccagacccagaacctgtacatcggtcctcagagcgaagctgatccatcattctctgtg
gttccggatctgagccccttgtttccaggagcagaagccaagcccgatcccattaaagga
ggcttaagagtgacaagtttcttcacctacaactgtctcgctgattcaaaggatctctac
agcgagtgtttacgcactttctggagctgcccgaactgtgagctctacatgcctctgact
cctctggagcggatgcatcacgaagcttcctgcaggcctgctggagaacagcaggaggcc
ggagaatcggaaggtggaaaggccggctcttcctcagcttcgggtctgacgagggtctat
cattgtgacgtctgtaacgaagacctgaagctcacctccacagagatccttaaacataaa
aggcagcacatgttttctgcaaagtga
DBGET
integrated database retrieval system
