KEGG   Cyprinodon tularosa (White Sands pupfish): 119786730
Entry
119786730         CDS       T07496                                 
Symbol
snx27b
Name
(RefSeq) sorting nexin-27b isoform X1
  KO
K17936  sorting nexin-27
Organism
ctul  Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:ctul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ctul04131]
    119786730 (snx27b)
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:ctul04990]
    119786730 (snx27b)
Membrane trafficking [BR:ctul04131]
 Protein recycling
  Others
   Others
    119786730 (snx27b)
Domain-containing proteins not elsewhere classified [BR:ctul04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   119786730 (snx27b)
SSDB
Motif
Pfam: PX PDZ RA PDZ_6 SNX17-27-31_F1_FERM RA_2 SNX17_FERM_C PDZ_2 USP7_C2 SNX17-31_F2_FERM VirE3 DUF5394 RA_3 Dickkopf_N
Other DBs
NCBI-GeneID: 119786730
NCBI-ProteinID: XP_038146163
LinkDB
Position
Unknown
AA seq 568 aa
MADVKGQGVCSPVPPLPRPSSRNGSGSGSITPDTGGSWQTPTTVTSGPRLVRIVKSDSGY
GFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVNVEGAT
HKQVVDLIRAGEKELVLTVLSVPPQEADSLDPGDDMSALSCYDYSDKQAVPISIPSYKHT
ELSGEKFVVYNVYMAGRQLCSKRYREFVILHQNLKREFANFTFPKLPGKWPFSLSEQQLD
ARRRGLEEYLEKVCSVRVIGESDIMQEFLSESDENYNGVSDVELRIAMPDKTTLTVRVRK
NSTTDQVYQAVVMKLGMDSITASYFALFEVINHTFVRKLAPNEFPHKLYIQNYTSAIPGT
CLTLRKWLFTTEEEILLNENQLAVNYFFHQAADDVKKGFIKVQQKSYQLQKLAEQMKMSM
YLGLLRSCEGYNEIVFPHCSCDSRRKGHVITAISIQNFKLHACTEEGTLENQVIVFEWEE
MQRWDTDEEGMAFCFEYTRGEKKPRWVKIFTPYFNYMHECFERVFCELRWRKEVEEEATD
KDNKNCSKDGMCGKNIFQLLRHRRDGGT
NT seq 1707 nt   +upstreamnt  +downstreamnt
atggcggacgtaaagggacaaggagtttgttccccggttcctccgttgcctcgcccttcc
tctcgtaacggctccggtagcggcagcattacgccagacaccgggggcagctggcagacg
ccaaccaccgttacctcaggccccagactggtgaggatagtaaagtcggactctggctac
ggcttcaacgttcgggggcaagttagcgaaggcggacagctgcggagcattaacggggag
ctgtacgctcctctgcagcatgtgagtgctgtcctccccgggggagctgcggacagagcc
ggtatatcaaagggggacaggatcttggaagtcaatggggttaacgtagagggagcaaca
cacaagcaggtggtggatctgatccgggctggcgagaaggagctggtgctgaccgttctg
tccgtcccgccgcaggaagccgactccttagatcccggcgacgacatgtcggctttgtcc
tgttacgactactccgataagcaggccgtcccgatctccattcccagctacaaacacact
gagctcagtggtgaaaagtttgtggtatataatgtatacatggcgggaaggcagctgtgc
tctaagcgttaccgggagtttgtgattttacaccaaaaccttaagagggaatttgccaat
tttacttttcccaagcttcctgggaagtggccgttttcactttccgagcagcagctagat
gcacgccgccgaggcttggaggaatacctggaaaaagtctgctcagtacgggtaattgga
gaaagcgacatcatgcaggagttcttgtctgaatcagatgagaactataatggggtttca
gatgtggagttgagaatagctatgccagataagacaacgctcactgttagagttcgtaaa
aactccacaacagaccaagtttatcaggctgtggtaatgaagcttggtatggatagtatt
acagccagctacttcgctctgtttgaggtcatcaaccacacctttgtgcgtaaactggcc
cccaatgagttccctcataaactttatatacagaactatacctcagccatcccaggaacc
tgcctcactctgcgaaagtggctcttcaccacagaagaggagatcttgctcaatgaaaac
cagcttgctgttaactacttctttcatcaggcagctgatgatgtgaagaaaggcttcatc
aaagttcagcagaagtcttatcagctccaaaagctggcagagcagatgaagatgtccatg
tacctgggcttgttgcggagctgtgagggctacaatgagatcgtattcccgcattgttcc
tgtgactctcgacgtaaaggccatgtgatcacagcaatcagtatacagaactttaagctg
catgcctgtacagaagaaggtacacttgagaaccaagtgattgtatttgagtgggaagag
atgcaaagatgggacacagatgaagagggcatggctttctgctttgaatatacacgggga
gagaagaagccacgctgggtgaagatttttactccctattttaactacatgcatgagtgc
ttcgaaagagtcttctgtgagctgaggtggaggaaagaggtggaagaggaggccacagac
aaggacaacaagaactgcagtaaagatggcatgtgtggaaagaacattttccagctgctg
aggcacagaagagatggaggaacgtag

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