KEGG   Cyprinodon tularosa (White Sands pupfish): 119786975
Entry
119786975         CDS       T07496                                 
Name
(RefSeq) probable histone deacetylase 1-B
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
ctul  Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03082  ATP-dependent chromatin remodeling
ctul03083  Polycomb repressive complex
ctul04110  Cell cycle
ctul04330  Notch signaling pathway
ctul04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:ctul00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    119786975
   03083 Polycomb repressive complex
    119786975
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    119786975
   04350 TGF-beta signaling pathway
    119786975
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    119786975
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ctul03036]
    119786975
Enzymes [BR:ctul01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     119786975
Chromosome and associated proteins [BR:ctul03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     119786975
   HDAC complexes
    Sin3A-HDAC complex
     119786975
    BRAF-HDAC complex
     119786975
    REST complex
     119786975
    SHIP complex
     119786975
    MiDAC complex
     119786975
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     119786975
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    119786975
  Chromatin remodeling factors
   NuRD complex
    119786975
SSDB
Motif
Pfam: Hist_deacetyl RNA_polI_A34
Other DBs
NCBI-GeneID: 119786975
NCBI-ProteinID: XP_038146519
LinkDB
Position
Unknown
AA seq 482 aa
MALSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAS
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAG
AVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYIKSFNLPLLMLGG
GGYTIRNVARCWTFETAVALDSSIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQAIPEDAPHPDSGDEDEEDSDKRVSIRAHDKRIACEEEF
SDSEDEAEGQGGGRRNAANHKKAKRVKKEEEKEGEEKKEVKEEEKEEEKMDTSGPNEEIK
TT
NT seq 1449 nt   +upstreamnt  +downstreamnt
atggcgctgtctcaaggaacaaagaaaaaagtttgctattattatgacggtgatgtgggg
aactattactacggccaaggccatcccatgaaaccccacaggattcgtatgacacacaac
ctcctcctcaattatggactgtacaggaaaatggagatctatagaccacataaagccagc
gctgaagagatgacgaagtaccacagtgacgactacatcaagttcctgaggtccatccgc
cctgacaacatgtctgagtacagcaaacagatgcagagatttaacgttggagaggactgt
ccggtttttgatggtctatttgagttctgccagctgtcaacaggcggatcagtcgctgga
gccgtgaagctgaacaagcagcagacagacatcgccattaactgggcgggggggctccac
cacgccaagaagtctgaggcgtctggtttctgctacgtcaacgacatcgtcctggccatc
ctggagctgctgaaataccaccagagggtgctgtacatagacatcgacatccaccatgga
gacggagtagaagaggccttctacaccacagatcgggtcatgacggtttctttccacaaa
tacggggaatacttccccggcactggagatctgagggacatcggcgcaggaaagggcaag
tactacgctgtgaactaccctctgagggacggcatcgatgatgaatcctatgaagccatc
ttcaaaccgatcatggctaaagtcatggagatgtaccagcccagtgcggtggttctgcag
tgtggagcagattctctctctggagacagactgggctgctttaacctcaccattaaaggc
catgcgaagtgtgtcgaatacataaaaagcttcaaccttcccctgctgatgcttggcgga
ggcggctacaccattcgtaacgtagcccgttgctggacctttgaaacggccgtcgccctg
gactcctccatcccaaacgagctgccctacaacgattacttcgaatacttcgggcccgac
ttcaagctgcacatcagcccgtccaacatgaccaaccagaacaccaacgagtacctggag
aagatcaaacagcggctctttgagaacctccgcatgctgcctcacgccccaggagtccag
atgcaggccatccccgaggacgctcctcaccccgacagcggagacgaggatgaggaagac
tccgacaaacgcgtctctatccgagcccacgacaagaggatagcgtgtgaggaggagttc
tccgactctgaggacgaggcagagggccaaggaggaggccgcaggaacgcagccaaccac
aagaaggcaaaaagggtgaagaaggaggaagagaaagaaggagaggaaaagaaagaagtg
aaagaagaagagaaggaagaggagaagatggatacgtctggaccaaatgaggagataaag
acgacctga

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