Cyprinodon tularosa (White Sands pupfish): 119787056
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Entry
119787056 CDS
T07496
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul02010
ABC transporters
ctul04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
119787056
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119787056
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ctul02000
]
119787056
Transporters [BR:
ctul02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
119787056
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
119787056
NCBI-ProteinID:
XP_038146610
LinkDB
All DBs
Position
Unknown
AA seq
2271 aa
AA seq
DB search
MAVSTQLGLLLWKNFTFRRRQTIQLLIEIIWPLFIFFILISVRMYYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRNPTPGESPGIVGNFNDSIISRLFNDAKKILLYTQNDK
SYEGYKGMLRALRKLQKNPARFKLKDFLRDNETLSHFLHHNASLSHHMLKQILEADVNLE
KVLTKGFGFHLRDLCNTTPLEEFVHIEDPSVSNMTQEIICKSSHDWLNKAQNHFLSNLDF
LKPIRKDVRSDPKVVQEVSAATDNLLESLGALGVELASMKSWKDMRKEILYLTANSTGSP
KQVYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGHHGNDSDSEPVSTYDNTSTPYC
NNLMKNLESSPISRMIWRALKPLLMGKILYTPDTPATQRIIHEVNKTFQELGVLRDLGGM
WEEMKPTFWNFLENSEEMDLVRSLLQSNTSAAFLDAQLSETEWSVSDVAAFLTKASEDQR
PAGSAYTWREAFNETDQAIKTISQFMECVNLDKLEPVANEERLVNKSMGLLDNQKFWAGI
VFPDIAYNNSTDLPPNVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFSY
LQDIIEQGIVRAITGTKEKTGIYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAII
IKGVVYEKEARLKETMRIMGLNNGTLWLSWFISSLIPLLISAGLLVMLLKMGNLLPYSDS
GVVFIFLGSFGVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGYGA
KLVVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLASPLEEDSYNLTTSICLMLFDAMLY
GIMTWYIEAVFPGQYGIPRPWYFPFTRTYWCGEKENKNINTPLSKKSNADAVCTEEDPSH
IEPGVYIENLVKIYSHGNKLAVDGLTLKFYEGQITSFLGHNGAGKTTTMSILTGLFPPTS
GTAYILGKDIRSELSTIRQNLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEDKVKTEMEQ
IVNDVGLPHKRKSRTSTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLL
LKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTHLGTGYYLTLVKRDY
DLSLQSCRNSASTVSYMKKTEKEDSVSESSSDAGLGSEPESETTTIDVSLISKVIFKHVP
EARLVEDLGHELTYVLPHQSAKDGAFVELFHELDDRLTDLGISSYGISDTTLEEIFLKVA
EDSGVDAVELSDGVVPTRTRRRHAFGDHQSCLKPFTEDDFDFNDSEGDPESRETDWLGGT
NGKGSYQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPF
GKYPKLALHPGMYGEQFTFISNDIPEDPHNSKLLGALMEKPGFGTRCMEGDPIPEYPCTA
VEGDWSLPEVSQSVRDIFDKGNWTMENPSPLCECSCEGRKRMLPECPAGAGGLPPPQMMI
SDKGTLQNLTGRNLSDYLVKTYAQIIGKSLNNKIWVNEFRYGGFSLGARSSQVLAHTDEV
DYAILQLRKRFELERGTAADRFFASLSGFIQGLDSENNVKIWFNNKGWHSISSFLNVMNN
AILRSSLPPGKDPAKFGITAYNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPAS
FVVFLIQERVTKAKHMQFISGVQPLLYWLANFVWDMCNYIVPATLVIIIFVCFQQDAYVS
STNLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELF
GSNDIGGVNDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGK
NLFAMAIEGVIFFCITVLIQYRFCFKARSSTSHLKPIGEEDEDVARERQRILSGGGHLDI
LELRELTKIYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDSDVTSGEAY
LAGKSVTTEINEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVAEWGIRK
LGLVKYVDKSAGSYSGGNMRKLSTAIALIGGPPVVFLDEPTTGMDPKARRALWNAILSII
KEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRVAGPDPE
LRPVMEFIERELPGSTLKEKHRNMLQYQLPSSLTSLARIFSLLTKNKEELSIEDYSVSQT
TLDQVFVNFAKDQSDEDHLKDVHLSKRDAVVVDLSQLNSFLMDSKTKESCV
NT seq
6816 nt
NT seq
+upstream
nt +downstream
nt
atggcagtctccactcagctgggtttactgctatggaagaacttcaccttcagacgaaga
caaactatccagctgttgattgagattatttggccgttgtttatcttcttcatcctgata
tcagtccggatgtattatccaccctatgagcaacatgaatgtcacttccctaacaaggcc
atgccctcagcaggcaccctgccctgggtacagggcattatctgtaacgccaacaatccc
tgctttcgaaatccgacccctggggagagtccagggatagtaggaaattttaatgactcc
ataatctcccgtctgtttaatgacgccaagaagatcctgctgtacactcagaacgataag
agctatgaaggctacaaaggaatgctgagggcccttagaaagctccaaaagaaccctgct
cgattcaagctgaaagactttttaagagacaacgagactctttctcactttctgcaccac
aacgcatcgctttctcatcacatgctgaagcaaattttggaggctgatgtaaatttggag
aaggtgcttacaaaaggatttggattccatctcagagatctttgcaacacgactcctttg
gaggagtttgtccacattgaagaccccagtgtgtccaatatgactcaagaaatcatctgc
aaatcatctcatgactggctgaacaaggcgcagaaccacttcctgtccaatttggacttt
ctgaaaccgattcggaaggacgtgaggtcagaccctaaagtcgtccaagaagtttcagct
gcaaccgacaatcttctggagagtcttggagcgctgggcgtcgagcttgccagtatgaag
agctggaaggatatgagaaaggagatcctgtatctgaccgctaactccacaggatctccg
aagcaggtgtaccaggctgtttcacggattgtttgtggacatccagagggaggcggacta
aaaatcaagtccctcaactggtatgaagacaacaactacaaggctctgtttggacaccat
ggcaacgacagcgacagtgagcccgtctccacttatgacaacacttccactccttattgt
aacaacctaatgaagaaccttgagtccagccccatttccaggatgatctggagagcctta
aaacctcttctcatggggaagatcctctacaccccagatactccagcaacacaaaggatc
atccatgaagttaataagaccttccaggagctgggcgtgctcagagacctgggtggcatg
tgggaggaaatgaagcctacattttggaacttcttggaaaacagcgaggagatggactta
gtcaggtccctgctccaaagcaacaccagcgcagcgttcctggacgctcagctcagtgag
actgagtggagtgtgtctgatgtggcggcgttcctcacaaaagcctcagaggaccagaga
cctgctgggtctgcgtacacatggagagaagccttcaacgaaaccgaccaggccataaag
accatttcacagtttatggagtgcgtgaacttagacaaactggagccggttgctaatgag
gaacgcttggtcaacaagtccatgggtcttctggataaccaaaagttctgggcaggaatc
gtttttcctgacatcgcttacaacaacagcacagatctgccgcctaacgtcaactacaaa
atccgcatggacattgataacgtggagaggactaacaagattaaagacggatactgggat
cctggtcccagagcagacccctttgaggaccttcggtatatctgggggggattttcctac
ctgcaggacatcatcgaacagggaattgtccgagccatcactggcaccaaggagaagacg
ggcatctacattcagcagatgccttacccttgctatgttgacgacatattcctgcgagtc
atgagccggtcgatgcctcttttcatgactctggcgtggatgtactcggtggccatcatc
attaaaggggtggtgtacgagaaggaggcgcggctaaaggagaccatgaggatcatggga
ctaaataacggcaccctgtggctgagctggttcatcagcagtttaatccctctgctgatc
agcgcaggcttgcttgtgatgctgctgaagatgggcaacctgttgccatatagcgactca
ggcgtggtgtttattttcctggggtccttcggcgtcgtaaccatcatgcagtgctttcta
atcagcactctgttttctcgtgccaacctggcggctgcctgcggaggaataatatacttt
accctctacctaccttacgttctgtgtgttgcctggcaggactatgtgggatatggagca
aagcttgtagtgagtcttctgtctcctgtggcttttggttttggctgtgaatactttgcc
ctgtttgaagaacaaggcgttggaatccagtggtcaaaccttcttgcaagcccactggag
gaggacagctacaacctgaccacctctatatgcctcatgctgtttgatgccatgttgtac
ggaataatgacctggtatattgaagcagtttttcctggtcagtacggtatccccaggcct
tggtatttccctttcactaggacatattggtgtggagagaaggagaataaaaatataaac
acccctctgtcaaagaagagcaacgctgacgccgtgtgcaccgaggaggaccccagccat
attgaaccgggcgtttatattgaaaatctggtgaagatctacagccatggaaacaaactg
gccgtggatggtctgacccttaaattctatgaagggcagatcacctctttccttggtcac
aatggtgctggcaagactacaactatgtcaatcctgaccggattgttcccacccacttct
ggtactgcctacatcctcggcaaggacatccgctctgagctcagcaccatcaggcagaac
ctgggggtctgcccccagcacaatgtgcttttcagcatgttgacggtcgaggagcacatc
tggttctatgctcgcctgaaggggctttccgaagacaaggtcaagacagaaatggaacaa
attgtaaacgatgttggactgccacacaagcgaaagtctcgcacaagcaccctgtcaggt
gggatgcagaggaagttgtcagtcgcacttgcatttgttggaggttctaaggttgttatt
ctggacgaacccactgctggtgttgatccgtatgcacgcagggggatttgggatctgctc
ctcaaatacagacagggccgcaccatcatcctctccactcatcacatggatgaagctgac
atcctgggtgaccgtattgccatcatttcccacggcaagctgtgctgcgtcgggtcgtct
ctcttcctgaagactcaccttggaacgggctactacctgaccctggtcaagagagactac
gatctttctctacagtcctgtaggaactctgccagcacagtctcctacatgaagaagaca
gagaaggaggacagtgtatcagagagcagttcggatgctggtctgggaagcgaaccagaa
agtgagaccaccactattgatgtctccctcatctccaaagtgattttcaagcatgtcccg
gaggcccgtctggtggaagatctcggccatgagctcacctacgtcttaccacaccagtca
gctaaagatggcgccttcgttgagctcttccacgagcttgatgaccgacttactgacttg
gggatttcaagttatggaatttctgacaccaccctcgaagagattttcctaaaagtggca
gaggatagcggagttgatgctgttgagctgtcagatggagttgtaccaaccaggacccgg
aggcgccatgcttttggagaccaccagagctgcctgaagcccttcactgaggacgacttt
gatttcaacgactctgaaggtgacccagaatctcgtgagaccgactggctcggtgggaca
aatggcaaaggttcctatcaggtcaaagggtggagtctgaagagacagcagtttgtcgcg
ctcctctggaaacgattcctctacgctcgccgctccagaaaaggcttctttgctcagatt
gtgctgcctgccgtgtttgtgtgcatcgcactggtgttcagcctcattgttcctccgttt
gggaagtacccaaaactggctctgcatcccggcatgtatggagagcagtttaccttcatc
agtaatgacatacctgaagacccccacaacagcaaacttttgggagctctgatggaaaaa
cctggattcggaacgcgctgcatggaaggagaccccataccggagtatccctgcacagcg
gtagagggtgattggtcactccctgaggtctctcaaagtgtaagagatatattcgacaaa
ggaaactggaccatggagaatccatctcctctgtgtgagtgcagctgtgagggccgtaag
aggatgctaccagagtgtcctgctggagccgggggacttccaccaccacagatgatgatc
agtgacaaaggcaccctgcagaatttgactggtagaaacctgtcggattatctggttaaa
acttatgctcaaatcattggcaagagcttaaacaacaagatctgggtcaacgagttcaga
tatgggggattttctcttggtgcacgaagttcccaggtgttggcccacacagatgaagtt
gattatgccattttgcaactgaggaaacgcttcgaactggaaaggggaacggcggccgat
cggttcttcgccagtctctctggtttcatccaaggactggactccgagaataacgtcaag
atttggtttaacaacaaaggctggcacagcattagctccttcctcaatgtgatgaacaac
gccattctgcgatcaagtctgcctcctggtaaagaccccgccaaatttggcatcacagct
tacaaccatcccctgaatctcaccaaggagcaactttcacaagttgcactgatgacaaca
tcggtggatgttctggtgtccatttgtgttatcttcgccatgtccttcgtccctgccagt
ttcgtggtctttcttatccaggagagggtgaccaaagccaaacatatgcagttcatcagt
ggagtgcaacctctcctctactggctggccaactttgtatgggatatgtgtaactacatc
gttccagccacgctagtgatcatcatatttgtctgtttccaacaagacgcctatgtttct
tccaccaatctgccagtgctagccctgctgctcctactctatgggtggtcaatcacccca
ctgatgtacccagcctccttcttttttaagatccccagcactgcctatgtggttctaact
agtgtcaacatactgatcggaatcaatggcagcgtctccacgtttgtcttggagttgttt
ggaagtaatgatatcggcggtgttaatgacatcttaaagaacgtcttcctcatcttccca
cacttctgcctgggtaggggactgattgatatggtgaagaatcaagccatggctgatgct
ttggagagatttggtgaaaatcggtttcgctctcctttggcatgggacatggtgggaaag
aacctgtttgccatggccatagagggcgttatattcttctgcatcaccgtcctcattcag
tatcgcttctgcttcaaagctaggtcctccaccagtcatctgaaacctattggagaagaa
gatgaagatgttgccagagagcgtcagaggatcctgagcggtggtggacatttggacatt
ctggagctgagggagctcaccaagatttacaagcggaaacagaagccggccgtggaccgg
ctgtgtgttggcattcctccaggagagtgttttggtttgcttggggttaatggggcaggg
aagaccagcaccttcaaaatgttgacaggagactcggatgtcactagcggtgaagcctac
ttagctggcaagagtgtgaccacagagatcaatgaggtgcaccagaacatgggctactgt
cctcagtttgatgctatcaatgatcttttgactgggagagagcacctggagttctacgct
atcctgagaggagtacctgagaaggaagtctgtgaggtggcagaatggggtatccgaaaa
ctgggtttggtcaaatatgtggacaaatcagctggaagctacagtggaggaaacatgagg
aaactctccactgccattgcactaataggaggaccgcctgttgtgtttctggatgaacca
acaacaggaatggaccccaaggcccgacgagccctctggaacgccatcctgagtataata
aaggaggggcgatccgtggtcctcacctctcacagtatggaggagtgtgaggcactctgc
accagaatggccatcatggtgaacggcaggttccgctgtctgggcagtgtgcagcacctt
aaaaacaggttcggagatggctacaccatcatcttgcgagtggcggggccggatccagag
ctgcggcccgttatggagttcatagagcgggagctcccggggagcacgttaaaagagaaa
caccgcaacatgctgcagtaccagctcccatcttccctcacctccctcgcacgaatcttc
tccctcctcacaaagaacaaggaggaactcagcatagaagactactctgtctctcagact
actttagaccaagtgtttgttaacttcgccaaggaccaaagtgacgaggaccacttaaaa
gatgtccacctgagcaagcgggatgcggttgtggtagacctttcccaattaaactctttc
ctcatggacagcaagacaaaagagagctgcgtctaa
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integrated database retrieval system
