KEGG   Cyprinodon tularosa (White Sands pupfish): 119787099
Entry
119787099         CDS       T07496                                 
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
ctul  Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ctul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    119787099 (taf5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ctul03021]
    119787099 (taf5)
   03036 Chromosome and associated proteins [BR:ctul03036]
    119787099 (taf5)
Transcription machinery [BR:ctul03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     119787099 (taf5)
   Coactivators
    SAGA/TFTC/STAGA complex
     119787099 (taf5)
Chromosome and associated proteins [BR:ctul03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     119787099 (taf5)
    STAGA complex
     119787099 (taf5)
    TFTC complex
     119787099 (taf5)
    SAGA complex
     119787099 (taf5)
    SLIK complex
     119787099 (taf5)
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 TFIID_NTD2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_VPS8 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_SCAP DSE1_N Beta-prop_TEP1_C CFAP251_N WDR90_beta-prop_4th Beta-prop_Aladin PAC11 Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_WDR41 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_HPS5 Beta-prop_SPT8 ASA1 Beta-prop_WDR19_1st Beta-prop_NOL10_N Tricorn_2nd WD_LRWD1 Beta-prop_DCAF12 Beta-prop_Nup120_160 LisH_PAC1 PROPPIN LisH Beta-prop_WDR11_2nd Beta-prop_ACSF4
Other DBs
NCBI-GeneID: 119787099
NCBI-ProteinID: XP_038146657
LinkDB
Position
Unknown
AA seq 746 aa
MAAVQGGMVDAKDETDIKKEPTSDGFGNNHANDARVLTASPGSSAAAGNNKPAAGAPEEQ
QTLLAVLQFLRKNKLSESAEILRREAGLPEEVLNPKGSDSTGSGQGGSTEVDGEDASSLL
SRVTLPTPGGAKAPSKAAGEDQPDVNVVLSAYSQQGDPTLYEVYYSGLKKFIESVLDCHR
AELSQVFYPLFVHMYLELVYNNHESEAKAFFEKFSGDQECYYEEDLRILSSLTKKEHMRG
NETLLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLYIDIFDGMLRSKSQID
AMSGSLAGEAKREANKAKVYYGLLKEPEIELPLDDEDEEADNEEGKPKKKKPKKDSTGSK
SKKQDPNAPSQTRIPLPELKDSDKLDKIMYLKESTKRVRLGPDNLPSICFYTFLNAYQGL
TAVDMTDDSSLIAGGFADSTVRVWSVTPKKLRKVKTAADLNLIDKESDDVLERIMDDKTA
SESKCLHGHSGPVYGISFSPDRNYVLSSSEDGTVRLWSLLTFTCLVGYKGHNYPVWDTQF
SPYGYYFVSGGHDRVARLWATDHHQPLRIFAGHLADVTCTRFHPNANYVATGSSDRTIRL
WDVLTGNCVRIFTGHKGPIHALAFSPNGKFLASGATDGRVLLWDIGHGLMVGELKGHTDT
IYSLRFSRDGEILASGSMDNTVRLWDAMKAFDDLETDDFTAATGHIHLQDNSQELLLGTY
MTKSTPVIHLHFTRRNLLLAAGAYNP
NT seq 2241 nt   +upstreamnt  +downstreamnt
atggcggccgtacagggtggtatggtcgacgcgaaagacgaaacggacattaaaaaagaa
ccgacgagtgatggcttcggaaataatcacgcgaacgacgcaagagtgctcacggcgtcc
cccggctcgagcgctgcggccggaaacaacaaaccagcggcgggagcccccgaggaacag
cagacccttctggctgtgctgcagttcctcagaaagaacaaactgtcagagtccgcggaa
attctgcgtcgcgaggcgggattgccggaggaggttctgaatccgaagggatctgattcc
accggttctggacaagggggcagtacggaggtagacggcgaagatgcgagctctctgctg
agccgggtgaccctccctacccccggcggagctaaggcgccgagcaaagcagctggcgag
gatcagccagacgtcaacgtggtgctgtcagcctacagccagcagggagatccgactctc
tacgaagtttactatagcggcctgaagaagttcatcgagtcggttctggactgtcacaga
gctgaactgtctcaggtcttctaccctctgtttgtgcacatgtacctggaactggtttac
aacaatcatgaaagcgaggccaaagctttctttgaaaagttcagtggagaccaggagtgc
tactatgaagaagacctacgcattttgtcaagcctgaccaagaaggagcatatgagaggg
aatgaaaccctgctggatttccgcaccagcaagtttgttttacgcatctcccgggactcc
taccagttgctgaagagacacctgcaggagcggcagaacaaccaaatatggaacataatc
caagaacatctctacatcgacatctttgatggcatgctgcggagcaagagccagatcgat
gccatgtcaggcagcttggctggagaggccaaacgagaagcaaacaaggctaaggtttac
tacggtcttctgaaagagccagaaattgagcttccccttgatgatgaggatgaggaagca
gacaatgaggagggtaaacccaaaaagaaaaagcccaaaaaggatagtaccggctccaaa
agcaagaagcaggatccaaatgctccctcacagacgaggatacctttaccagagctaaaa
gactcagacaagctggacaagatcatgtacctgaaggagtccactaagagagttcgattg
ggaccagataacctgccctccatctgcttctacactttcctaaacgcataccagggtcta
actgcagtcgacatgacggatgactccagcctgattgcaggaggctttgctgactctaca
gtacgtgtgtggagtgtcacgccgaaaaagctccgcaaggtcaagactgcagcagacttg
aatcttattgacaaagagtcagacgatgtgcttgagcgaattatggacgataagacagcc
agtgagtcaaagtgccttcatggacacagcggaccagtgtatggcatcagcttcagccca
gacagaaactacgtgttgtcgagctctgaagatggcacagtcaggctgtggagccttcta
acattcacctgtctggtgggatacaaaggccacaactacccagtatgggacacccagttc
tccccttatgggtattattttgtctcagggggacacgaccgggttgcccgcttatgggca
acagatcaccaccagcctctgcggatatttgctggccacctggccgacgtcacttgcact
cgcttccaccccaacgccaattatgtggccacaggttcttctgaccgcaccatccgtctg
tgggacgtcctcactggaaactgcgtccgtattttcaccggccataagggtccaatccac
gccctggctttctctccaaacggaaagtttttggcctctggagccactgatggtagagtc
cttttgtgggatatcggtcatggactgatggttggagagctcaaaggccacacagatacc
atctattccctccgattcagtagggatggagaaatcctcgcctccggttctatggacaac
actgttcgcctgtgggatgccatgaaagcatttgatgatttagagactgacgacttcact
gcagctacaggacacatccatctccaggataactcccaggagcttttgttaggcacctac
atgactaaatcgactcctgtaatacaccttcacttcacacggagaaacctgcttctggct
gcaggagcatataatccataa

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