KEGG   Cyprinodon tularosa (White Sands pupfish): 119787141
Entry
119787141         CDS       T07496                                 
Name
(RefSeq) integrin beta-1-like isoform X1
  KO
K05719  integrin beta 1
Organism
ctul  Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03271  Virion - Rotavirus
ctul04145  Phagosome
ctul04510  Focal adhesion
ctul04512  ECM-receptor interaction
ctul04514  Cell adhesion molecules
ctul04530  Tight junction
ctul04810  Regulation of actin cytoskeleton
ctul04820  Cytoskeleton in muscle cells
ctul05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:ctul00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    119787141
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    119787141
   04514 Cell adhesion molecules
    119787141
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    119787141
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    119787141
   04530 Tight junction
    119787141
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    119787141
   04810 Regulation of actin cytoskeleton
    119787141
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    119787141
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ctul04131]
    119787141
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ctul04147]
    119787141
   04515 Cell adhesion molecules [BR:ctul04515]
    119787141
   04090 CD molecules [BR:ctul04090]
    119787141
Membrane trafficking [BR:ctul04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    119787141
Exosome [BR:ctul04147]
 Exosomal proteins
  Proteins found in most exosomes
   119787141
Cell adhesion molecules [BR:ctul04515]
 Integrins
  Integrin beta subunits
   119787141
CD molecules [BR:ctul04090]
 Proteins
  119787141
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail Integrin_b_cyt EGF_integrin PSI_integrin I-EGF_1 EGF_2 EGF_Teneurin vWA_SIBA-E UPA-FIIND
Other DBs
NCBI-GeneID: 119787141
NCBI-ProteinID: XP_038146724
LinkDB
Position
Unknown
AA seq 820 aa
MLKQGVLSGVGLEGRSTLLNTTSSHMNLQFLLIAVLAAVLRGSLAQQDASSCIKANAQSC
GECIQVSETCGWCSDENFLTIGSPKSARCDDLESLKERKCKQIENPRGSITVDKDRPVTV
RKDRTEKLKPEQITQIQPQKLTLKLRSGEPQTFKLKFKRAEDYPIDLYYLMDLSYSMKDD
LENVKNLGTDLMREMQDITTDFRIGFGSFVEKTVMPYISTTPARLLNPCSGHNCTSPFSY
KNVLKLTKNGDEFNQLVSQQQISGNLDSPEGGFDAIMQVAVCEKQIGWRNVTRLLVFSTD
AGFHFAGDGKLGGIVLPNDGKCHLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTE
EFQSVYKELKNLIPKSAVGMLSSNSSNVIKLIIDAYNSLSSEVTLENGKLPDGVAISYKS
FCKNNVVGTDENGRKCSNISIGDEVFFQITVTSEKCPSTGKQESFKIKPQGFQEEVEIVL
DFICDCECAAKGETNSKKCSKGNGTFECGACKCNEGRIGLECECSKDDVRTDDLDASCRK
DNGTDICSNNGDCVCGTCECRKRANPAEVYSGQYCECDNFNCDRFNNKLCGGNGRCECRK
CICDANYTGNACECPMDTSTCLAKNGQVCNGRGKCECGTCMCTDTKFQGPTCEVCPTCPG
VCPEHKDCVQCLTFQSGEKKDTCSEDCKKILLKKVPERDNLPQPNDQSFPLTFCKERDEN
DCWFYFTLAVRDDIKEVHVVEKPECPAGPDIIPIVAGVVAGIVMIGLALLLIWKLLMIIH
DRREFAKFEKEKMNAIWDTGENPIYKSAVTTVVNPKYEGK
NT seq 2463 nt   +upstreamnt  +downstreamnt
atgttaaaacagggagtgctgtccggggtagggctagagggtcgttctacgttactcaac
accacatcgtcacacatgaatctccagtttcttttgatagcagttttggcagcggtcctc
agaggcagcttggctcagcaagatgccagcagctgcatcaaggcgaacgcacagtcatgt
ggggaatgcatccaagtctccgagacatgcgggtggtgctctgatgaaaatttcctcacg
attggttctcccaagtcagcccgttgtgacgacctggagtccctgaaggaaagaaaatgt
aaacaaattgaaaacccgcgtggaagcatcaccgtcgacaaggacagaccagtcacggtt
cgcaaggacaggactgagaaactgaaacctgagcagatcacccagatccagcctcagaaa
ctcaccctgaaactccgatctggtgagccgcagacctttaagctgaaattcaagcgtgct
gaggactaccccattgacctgtattacctgatggacctctcatactctatgaaggacgac
ttggaaaatgttaagaaccttggcaccgacctaatgagggaaatgcaggacatcaccaca
gacttcaggattggttttgggtctttcgttgagaagacagtcatgccctacatcagcaca
accccggccaggctgctgaacccgtgctccggccacaactgcaccagccccttcagctac
aagaacgtcctaaagctcaccaaaaacggagacgaattcaaccagcttgtgagccagcag
cagatctctggcaacctggactccccagagggggggtttgacgccatcatgcaggtggca
gtgtgcgagaagcagatcggctggaggaacgtcacccgtctgctggtgttctccactgac
gcgggtttccacttcgcaggagacgggaaactgggtgggatcgtcctgcccaacgacggg
aagtgtcacctggagaacaacatgtacaccatgagccactactatgattacccgtccatc
gctcatctggttcagaaactaagcgaaaacaacatccagacgatctttgcggtaactgag
gagttccagtcggtttataaggagctcaaaaacctaattcccaagtcagctgttggaatg
ctgtcctccaattccagcaacgtgatcaaactcatcatcgatgcctacaactcattatct
tctgaagtcactcttgaaaacgggaagctgccagatggagttgctatttcctataagtcc
ttctgcaagaacaacgtggtcggaacagacgagaacggcaggaaatgctccaacatctcc
atcggagacgaggtctttttccagattactgtaacatcggaaaaatgcccatctactggg
aagcaggaatcctttaaaatcaaacctcagggcttccaagaggaggtagaaatagttctg
gatttcatctgtgattgtgaatgtgctgcgaagggagagaccaacagtaagaagtgctcc
aaaggcaatggcacctttgagtgcggcgcctgcaagtgtaacgagggtcgcatcggcctg
gagtgcgagtgcagcaaagacgacgtccgaaccgacgacctggacgccagctgccgaaag
gacaacggcaccgacatctgcagcaacaatggcgactgcgtctgcggtacctgcgagtgc
aggaagcgggccaatcctgcagaggtttacagcggccagtactgcgaatgtgacaacttc
aactgcgaccgtttcaacaacaagctctgtggaggtaacgggcgctgcgagtgcagaaag
tgcatctgtgatgccaactacacgggcaatgcctgcgagtgcccgatggatacctcaacc
tgcctcgccaaaaacggacaggtctgcaatgggcgcggcaaatgtgaatgcgggacctgc
atgtgcaccgacaccaaatttcagggccccacctgcgaagtctgtcctacctgtccgggt
gtttgcccagagcacaaggattgtgtgcagtgcctgaccttccaaagtggtgagaagaag
gacacctgtagtgaggactgcaagaagatcctcctcaaaaaggtaccagagagggacaac
ctacctcagcctaatgaccagtccttcccactcaccttctgcaaggagagggacgagaat
gactgctggttctacttcaccctcgctgtcagggacgacatcaaggaggtccatgtcgtg
gaaaagcctgagtgcccagctggtcctgacatcatccccatcgtggcgggtgttgtcgct
ggcattgtgatgatcggccttgcgctcctgctcatctggaagctcctcatgatcattcat
gaccgcagagagtttgccaagtttgagaaggagaagatgaacgccatctgggacacgggt
gagaatcccatctacaaaagcgctgtcacaactgtggttaacccgaagtacgaggggaaa
tga

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