Cyprinodon tularosa (White Sands pupfish): 119787272
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Entry
119787272 CDS
T07496
Symbol
rad54b
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119787272 (rad54b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctul03400
]
119787272 (rad54b)
DNA repair and recombination proteins [BR:
ctul03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
119787272 (rad54b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_22
Nodulin_C
Motif
Other DBs
NCBI-GeneID:
119787272
NCBI-ProteinID:
XP_038146971
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All DBs
Position
Unknown
AA seq
936 aa
AA seq
DB search
MRRSGAPSQLLGNAAKKPRFLPPGASALYPVTESKPLVSKHGLENALDKVHRSLSASVVT
KTTCSVQAETSQAPPGLSKVLARVLSATETKENLIETKYEDSTSDHTEDVNLSGLNGSPP
WTHGSPQTPQPPSDPADSGCALDGACYFSVVWCKASKKKHKRWEGDAVLVVRGRSVVLKD
MEGKDIGKGSGYKVSELASLSEGETLMIGGKEIEVMGIISAEDFAKGRCFQEVQTDQAES
HTKALPPPSRSFNSKRFCLPSMLGRSGLPENNKPQGEQTSKPRYDPLAPGALVMPRPSSN
HQWLHNKSGLPVVDVVVDPHLTTHLRPHQREGILFLYECVMGMRAAGRHGAILADEMGLG
KTLQSVALCWTLLKQGPYGGKPIVKRVLVVTPGSLVQNWRAEFNKWLGRERISIFTVDQD
HRIEEFLLSPLHSVLVISYEMLLRGLEQIQKVEFGLIICDEGHRLKNSSIKTSSALSSLS
CNRRVILTGTPVQNDLQEFYAIIEFVNSGILGSTTAYRKVYEEPILRSRQPSCSEEDRVL
GEERAAELSRLTGMFILRRTQEIINRYLPPRLDWTLFCMPSPLQQKLYRHLLCHQVFRAC
LQGFTQSSTHLACITALKKLCNHPGLLHTTVKERTDRGSMESSLYEGLSDLFPESYSLAG
FSTSDSGKLLVLSDLLSAIRQLSPSDRVVLVSNYTQTLDLLQDMCVQAGYTFLRLDGQTP
VSQRQRLVDSFNSPYSQSFVFLLSSKAGGVGLNLIGASHLVLYDIDWNPANDIQAMARVW
RDGQKKSVHIYRLLTAGTIEERIFQRQVSKQGLSGTVVDLGKAAEHTSFSTSELRDLFSL
TDTPCLTHDLLNCSCSMDGSVNDVEGEEVEQISDRPCQLGRQGDRKGAAQKHLSMSELMQ
WRHFSGDTHSYSDPYLDHACSHITFAFQTTISNAAQ
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgctcaggagctcccagtcagcttttgggtaatgcagcgaaaaaacctcggttc
ctgccacccggagcttctgctttatatccagtaactgaatcaaagcctcttgtctctaaa
catggtttggagaatgctctggataaggtccacagaagtctttcagcatcagttgtgact
aaaaccacctgcagtgttcaggctgaaactagccaggctcctccaggcttgtccaaagta
ctggcccgtgtcctcagtgctacagagactaaagaaaacctgatagagacaaaatatgaa
gactctacaagtgaccatacagaggatgtaaatctatcaggactaaatggaagccctcct
tggactcatgggtctcctcaaacccctcaacctccttcagatcctgcagactctggctgt
gcacttgacggggcctgttactttagtgtggtctggtgtaaagccagtaagaagaaacac
aagcgctgggaaggtgacgccgttctggttgtgagagggcgttctgttgtactcaaagac
atggaggggaaggatattgggaagggtagtggctacaaggtgtcagagctggcctcactg
tctgagggagagacgttgatgattggagggaaggagatagaggtgatgggcatcatttcc
gctgaggactttgccaaaggacgctgtttccaggaggttcagacagatcaagcagagtcg
cacacaaaggctctcccgcctccctctcgcagctttaactccaaacgcttctgcctcccg
tcaatgttggggagatcagggcttccagaaaataataaaccacaaggggaacaaaccagc
aaacctcgatatgaccccttagctccaggtgcgctggtgatgcctcgcccctcttctaac
caccagtggcttcacaacaagtcaggccttcctgtggttgatgtggtggttgacccacac
ctgaccacgcacctgcgaccccaccagagggagggcatcctcttcctctatgagtgtgtt
atgggcatgagagctgcaggtcgccacggcgccatcctggctgatgagatgggtcttggg
aagactctgcagagtgtggcgctgtgctggacgttgctgaagcaaggcccttacggcggt
aaaccgattgtgaagcgggtcctcgtggtcactcctggcagcctggtgcagaactggaga
gcggagtttaacaagtggctcggccgggaaaggatcagcatcttcaccgtggatcaggac
cacaggatagaggagtttctgttatctcctctacatagtgttctcgtgatcagctacgaa
atgctgctgcgcggcttggagcagattcagaaagtggagtttgggctcatcatttgcgac
gagggtcacagactgaagaacagcagcatcaaaacatcctccgccctcagcagcctcagc
tgtaaccgcagagtcatactcacagggacgccagtacaaaacgacctgcaggagttctac
gccattatagagtttgttaactcaggaattcttggttcgacaacggcttatagaaaagtg
tatgaggaaccaattctacgctccagacagccatcctgctctgaagaggacagagttctg
ggggaagagcgtgctgctgaactctctcgtctcactggcatgttcattttgagacggacg
caggaaatcattaaccgctacttaccacctcgtctggactggacattgttctgcatgccg
tccccgctgcagcagaagctgtacagacatctcctctgccaccaggtcttcagagcctgc
cttcagggctttactcaaagcagtacacacctggcctgcatcactgcactaaagaagctc
tgcaaccatcctggtttgctccacaccactgtcaaggagaggactgaccgtggatctatg
gagagttccttatacgaggggctgtccgatctcttcccagaatcctattccttggctgga
ttcagcacctctgactctggaaaacttttagttctctctgacctgctgagtgccatcaga
cagctcagcccctcagatcgggtggttctggtgtcaaactacactcagactctggactta
ctacaggacatgtgcgtacaagccggttacacattcctgaggctggatggtcagacacct
gtaagccagcgccagcgactggttgacagttttaacagcccctactctcagagctttgtg
ttcctgctgagctccaaagcaggcggggtggggctcaatctgatcggagcgtcccacctg
gtgctatatgacatcgactggaaccccgccaatgacatccaggccatggctcgtgtttgg
agagatggacagaaaaagagtgtgcacatttaccgcctccttactgcaggcaccattgag
gagcgtatatttcagagacaggtgtccaaacagggcctgtcaggaaccgtggtcgacttg
gggaaagcggctgaacacaccagtttctctaccagtgagctgcgagatcttttcagtctg
accgacacgccgtgcttgactcatgacctgctgaactgcagctgcagcatggacgggtcg
gtcaacgacgtggagggggaggaggtggagcagatctctgacaggccttgccagcttggt
cgtcagggcgaccgtaagggggcggcacagaagcacctcagcatgtccgagctcatgcag
tggagacacttctctggcgacacacactcctactcagacccttacctcgaccacgcatgc
agccacatcacatttgccttccagaccaccatctccaatgcagcccagtga
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