Cyprinodon tularosa (White Sands pupfish): 119787290
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Entry
119787290 CDS
T07496
Name
(RefSeq) transcription factor Sox-8-like
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctul03000
]
119787290
Transcription factors [BR:
ctul03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
119787290
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
119787290
NCBI-ProteinID:
XP_038146997
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MAEEHNILTEDPCSPHSCDSSAPRDELDRDPPNSPAGSDARGAESCAQEERFPACIRDAV
SQVLKGYDWSLVPMATQGERGLKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSK
TLGKLWRLLSESERRPFIEEAERLRLQHKRDYPDYKYQPRRRKSTKPGQADPRPASVQQQ
QQGFYKAEPGLSRLEGIGDASKHYNTDKPGHPHGPPTPPTTPKTEQHIVNKYEAQKPVES
GPAIHSNRNIDFSNVDISELRTDVIGTIDGFDVHELDQYLRPNSHATTPLAQMETSCPSG
SYLPQSTPNHSDSIVSCSLKTSDVIPTEEDSNKQPQIKMEQMSPGQCSSSPSSCTPPPSH
PPEYTSLSSNVCPSTTFSSSPTSPNPPDYTDLQNASLYSAFSGYPASLHQYPFFHSSHRS
YATPLIHSLGLAPPPHSPSSVWDQPVYATLSRP
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggagcacaatatactgaccgaggatccatgcagcccacatagctgtgatagc
tctgcgccccgggatgaactggaccgagatcctccaaactctcctgctggatctgatgcg
cgcggagcggagagctgcgcgcaagaggagcgcttccccgcatgcatccgggacgcggtt
tcacaggtgctgaagggatatgactggtcgctggtgcctatggcgacccagggggagagg
gggctgaagagtaaacctcacgtaaaaaggccgatgaacgccttcatggtttgggcgcag
gcggcgcggcggaagctggcggaccagtatccacatctgcacaacgctgaactgagcaag
actctgggcaagctgtggcggcttctctctgaatcagaaaggcggccattcattgaggag
gcagaaaggctaagactgcaacacaagagagactatccagactacaaataccagcctcgg
agacgcaaaagcactaaacctgggcaagcggacccaagacctgcatcggtccaacagcag
cagcagggcttttataaggcagaacctggactgtccaggctggagggcataggagatgcc
tcaaagcattacaacacggacaagccaggtcaccctcatggtcctccaactcctcctact
acccctaaaactgagcagcacatagtgaacaagtatgaggcccaaaagcctgttgaaagc
ggccctgctattcattcgaaccgaaacatcgacttcagcaatgtagacatttcagagctc
agaaccgacgtcattggtaccatagatggcttcgatgtgcatgagctagatcagtacctg
cgtccgaacagccatgcaacaactcctctagcccagatggaaactagctgcccgtcgggg
tcatacctcccccaaagcactccaaatcattccgacagtatagtcagctgctcactcaaa
acatctgatgtgattccaacagaggaggacagcaacaaacaacctcagatcaaaatggag
cagatgagcccgggccagtgtagctcctcaccctcctcttgtactcctccaccctcacac
ccaccagagtacacctctcttagctcaaacgtctgcccttccaccaccttctcctcctcg
ccaacgtctcctaatccaccagactacactgaccttcagaatgccagcctctacagcgcg
ttttcaggttaccctgccagcctgcaccagtatccgttctttcactcctcccacaggtca
tatgcaactccgctcatccacagcctgggattggcgcctcctccacacagtccttcctct
gtgtgggatcagcctgtctacgcaacgctttccaggccttga
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