Cyprinodon tularosa (White Sands pupfish): 119787352
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Entry
119787352 CDS
T07496
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
119787352 (shoc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_LRWD1
LRR_9
LRR_13
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
119787352
NCBI-ProteinID:
XP_038147092
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MSSSLGKEKDLKEKDPKGGLAGKERDKEAKALSSLVKDGGKETKTKGKDTKEGKKDTSSS
TPGVAFSVDNTIKRPNPAPTTRKKSSNAEVIKELNKCREENSTRLDLSKRSIHMLPTAIK
ELTQLSELYLYSNKLQSLPAEVGCLSSLVTLALSENSLTSLPDSLDSLKMLKMLDLRHNK
LREIPPVVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLPAEIGELCSL
ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIP
KSLAKCRELEELNLENNNISVLPEGLLSSLLNLTSLTLARNCFQSYPVGGPSQFSTIYTL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTALPLDFGTWTSMVELNLATNQLNKIPED
ICGLISLEVLILSNNLLKKLPHGIGSLRKLRELDLEENKLECLPHEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLTHLPAQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagttccttaggtaaagaaaaagatttaaaagaaaaggaccctaaaggtggtcta
gcaggtaaagaaagggacaaagaggccaaggctttatccagcctagtcaaagatggtggc
aaagaaacaaagaccaaagggaaagacacaaaggaaggaaagaaggacacaagcagctca
actccaggtgttgccttttctgttgacaacacgataaagcggccaaacccagcaccaacc
acacgcaagaaatccagtaatgcagaggtcatcaaagagcttaataagtgtcgggaagag
aactcaaccagactggacctatccaaacggtccattcacatgctgcccactgctattaag
gagttgactcagttgtcagaactctatttatacagcaacaagctacagagcctaccagct
gaggtgggctgcctgtcaagcctggtcactttagccctcagcgagaactccttaaccagt
ttgcccgattccttggattctctgaagatgcttaaaatgcttgatctccggcacaacaag
ctcagagagatacctcctgtggtctaccggctgacgtctctgaccacgctgtacctgcgc
ttcaatcgcatcaccacagtggagaaggacatccgaaatctttccaagctcaccatgctc
agcatccgggagaacaagattaaacagctaccagcagaaataggggagctatgcagcctc
attactctggatgttgcccataatcagttggaacatctaccaaaggagatcggaaattgc
acacaaataaccaaccttgacctgcagcacaacgagctcttggacctcccagagactata
ggaaatttggcaagtataaatcgattaggactgcgatataaccgattgtcagccatcccc
aagtcgttagccaaatgtcgagaacttgaggaactaaaccttgaaaacaacaacatttca
gtattgccagagggcctgctgtccagtttgctaaatttgaccagtctgacgctggccagg
aactgcttccagtcttaccctgtgggtgggccctcccagttctccactatttacacgctc
aacatggagcacaaccgcatcaacaagatcccgtttggtatcttctccagggccaaagtg
ttaagcaagctcaacatgaaggacaaccagttaacagctttgccgttggattttggtaca
tggactagcatggttgaacttaacctggccactaatcagctgaataaaatcccagaagac
atctgtggacttatctctctagaggtattaatactgtccaataatcttctgaagaagcta
ccgcatggtattggaagtttgagaaagttacgagaactcgacctggaggaaaacaaatta
gaatgtctaccgcatgaaatcgcttaccttaaagatttacagaaattggtgttgaccaat
aatcagctgactacattaccaagaggcatcggccacctcaccaacctgactcaccttgga
ttgggagagaacctgctgcaacaccttcctgaggagatcggcacactggagaatctggag
gaactgtacctcaacgacaaccccaacctgcacagcctcccgtttgagctggccctttgc
agcaagctgtccatcatgagcatcgagaactgtcccctcacccacctgccggcccagatc
gttgcaggtggcccgtctttcatcatccagttccttaagatgcagggaccttaccgtgcc
atggtctga
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