Cyprinodon tularosa (White Sands pupfish): 119787445
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Entry
119787445 CDS
T07496
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03022
Basal transcription factors
ctul03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119787445 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
119787445 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctul03021
]
119787445 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
ctul03400
]
119787445 (gtf2h1)
Transcription machinery [BR:
ctul03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
119787445 (gtf2h1)
DNA repair and recombination proteins [BR:
ctul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
119787445 (gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
119787445
NCBI-ProteinID:
XP_038147247
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MASLSEEVLLVVKKVRQRKQDGTLYLMAERIAWGPEGKDRFTVSHLYSDIRCQKISPDGK
AKIQLQLVLHTGESTTFHFANESTALKDRDAAKELLQQLLPKFKKKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLGGVNNGEPAPYNNKQEVGISGAFLADIRPQTDG
CNGLKYNLTADIIESIFRTYPAVKQKYSENVPHNLTEKEFWTRFFQSHYFHRDRINTSSQ
DIFSECAKQDEKGLKSLVTQGVKNPLVDLLSLEDKTLDEGYGISKTLPSTSNANKTVKES
SNSAIIKRFNHHSAMVLAAGSRKGDVPNDQASETSSTDGNSRDSDFFQPPLKKVKLQEAI
EYEDLQRENAPKTVALKLKKSDRYAHGPVPLQSQQYTTSQDIINSVNYIRQEMANYKPRL
TQVLSSTTATSAIASLSPGGVLMQTVGQQSINQMVPTDIQGELKHLYIAAGELLRHFWSC
FPVNTPFLEEKVTKMKTNLERFQMTKLRPFQEKIQRQYLSTNLTGHLEDMFQTAYNKFHI
WQTRRMMRKT
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcatctctgtcagaggaggtgctgctggtggtgaagaaagtccgtcagaggaagcag
gatgggaccctctacctgatggcagaaagaatagcttggggtccagaaggcaaagaccgc
ttcactgtcagccacctctattcagatatccgctgtcagaagatcagtcctgacggcaaa
gccaagattcagctccagctggttcttcacaccggagaaagtaccacattccacttcgcc
aatgagagcactgcgctgaaagaccgagatgctgccaaggagctgctgcagcagctgctg
ccaaagttcaagaagaaggccaacaaggagctggaggagaaaaacaggatgcttcaggaa
gatccggtgcttttccagctttataaagaccttgtggtgagccaagtcatcagtgctgag
gagttttgggccaacaggttaggaggcgttaataatggggaacctgcgccttacaacaac
aaacaggaagtcgggatatctggagcatttctagcggatatcagaccacagactgatggc
tgtaacggcttgaagtataatctgacggcggacattattgagtccatttttagaacatat
cctgcagtgaagcagaagtatagcgagaacgtgcctcataacctgacggagaaggagttc
tggacccgttttttccagtcccattatttccacagagaccgaatcaacaccagttcacag
gatatcttctcagagtgtgccaagcaggatgaaaaaggtttaaaatccctggtgacccaa
ggagtaaagaatccattggtcgaccttttgtccttggaggataaaacactcgacgagggt
tatggaataagcaaaaccctaccttcaacttcaaatgcaaacaagacggtgaaggagagc
agcaactctgcaattataaagcgatttaatcatcacagcgccatggtgctggcagccggc
tcacgcaaaggagatgtgcccaacgatcaagctagtgagactagcagcactgatggcaac
tccagagattctgatttctttcagcctcctctgaagaaggtgaaactacaagaagccata
gaatatgaggatcttcaaagggaaaatgcacctaaaacagtggcgttaaaactgaagaag
tctgaccggtacgctcatggtcccgttcctcttcagtctcaacagtatacaaccagccaa
gacatcatcaactccgtcaactatatccgtcaagagatggcgaattacaaaccccgcctc
actcaggtgttgtccagcacaacagcaacgtccgccattgcatctctctctccaggaggg
gtccttatgcaaactgttggacagcaatcaataaaccaaatggttcccactgatattcaa
ggagagctgaagcacctttatattgctgctggggagctactgagacacttctggtcctgt
tttcctgtaaatacgccatttttggaggaaaaggtgacaaaaatgaagacaaacttggaa
cggtttcaaatgaccaagcttcgtccttttcaggagaaaatccagcgtcagtacttaagt
acaaaccttacaggccacctggaggacatgtttcagacggcctataacaagtttcatatt
tggcagacccgtaggatgatgaggaaaacctga
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