Cyprinodon tularosa (White Sands pupfish): 119787471
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Entry
119787471 CDS
T07496
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ctul03036
]
119787471 (msh4)
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Meiosis-specific proteins
Others
119787471 (msh4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
nSTAND3
AAA_23
AAA_28
ATPase_2
AAA_29
Motif
Other DBs
NCBI-GeneID:
119787471
NCBI-ProteinID:
XP_038147280
LinkDB
All DBs
Position
Unknown
AA seq
908 aa
AA seq
DB search
MFQSSTDEVTDSETSEWGQTCGRRGLKETTASSCCPASLSSAPCYRSSEVDTPATTSAPP
QSGITSGQSQSDIRLGRTTSSVLVSSSSESCSVRFPGGTPRLRRTPGSAGPTGTSSSSAS
STSAASVIVAIVEGRGLARGEIGMACIDLKCPELVLSQFADTGTYAKVITRIRILMPVEI
LMPDTASEKGKGTKLFKLITENYPGVAITAIQRKYYNEKKGLEYIQQLCAPEFATVLMEV
QAKYYCLATAAALLKYLEFIQSSFYASKSLKVIFKGSEQTAMIDSASAANLELVLNNRDH
RSEYTLLGVLNHTKTPGGLRRLRSNILEPLLDVDTINTRLDAIQELLQNEELFFGLKNAI
GHFLDIDRLLSVLIQIPKQETVQAAESKITHVIQLKHTLDLVPQLRTELKTCSTALLKAY
STTLEDNRFELILEQIKTVVNDDTTYLKGSLNMRTQKCYAVRPNINEFLDIARRVYTEIV
DDIAGLVNQLGEKYGLPLRTSFSTSRGFFIQMKLDGVVLPEGILPQEFIKVSKYRNNYSF
TTANLIKMNGRCDEALREIFHMSYVVICQLLTGIHEHIHCLYKLSDTVSMLDMLLSLASA
CTISDYVRPEFTDTLAIKQGRHPILERLARQQPVSNNSYISEGSNFVIITGPNMSGKSTY
LKQVALCQIMAQIGSFVPAEYASFRIADQIFTRIGVDDDFETNCSTFMLEMKEISYIIHN
ASDRSLIIIDELGRGTSAEEGIGICHAVCEFLLGLKAFTLFATHFLELCQLESLYPNVEN
QHMEVQHTRSRDSGTEQVVYTYLLSRGCYEEKHYGLRAAEMTSLPPSIIQEAKSMASKIS
QQLLAKYPTDPETQRQRAVYRLATRLLQTARNSRLDPESLRMYLKGLKRQYEAELQAASP
ARPTDSGD
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagagcagcacagatgaggtaaccgacagtgagacctcagaatggggacaaacc
tgtggaagaagaggcttaaaggaaaccaccgcctcatcctgctgtcccgcatccctctcc
tctgctccctgttaccgcagttcagaggttgacactcccgctacaaccagtgctccaccc
caatccggaataacctcaggtcagagccagagtgatatcaggctgggaaggacaacctca
tcggtcctcgtgtcttcctcctctgaaagctgttcagttcgtttccccggaggaacaccc
aggctcaggaggaccccgggttcggctggccccactggaacaagcagctcgtctgcctcc
tccacctctgcagcctctgtgatagtagcaatagtggaagggcgaggtttggccagagga
gagattggcatggcctgcattgacttaaaatgtccagagcttgtactttctcagtttgca
gacacagggacatatgctaaggttataaccaggattcgcatcttaatgcctgtggaaatc
ttgatgccagacacagccagtgaaaagggaaaagggacaaaactctttaagctaattaca
gagaattatccgggtgtagccatcactgcgatccagaggaagtactataatgagaagaag
gggctggagtacatacaacagctgtgtgctcctgagtttgccaccgttttaatggaggtt
caagcaaagtattattgcctagcaactgctgctgctttgctgaaatacctggagtttatc
cagagctcattttatgcatccaagtctctaaaagtgatctttaaagggagcgaacagacg
gcaatgattgactcagcatctgcagctaacttggagttggtgctcaacaacagggaccac
agaagtgaatatactcttttaggagtactgaatcatacaaaaacgccaggtggactgagg
aggctgcgctccaatattttggagcctctgcttgatgtggacaccataaacactcgcttg
gacgccatacaagagctgctgcaaaatgaggagctctttttcggcctgaagaatgccata
ggtcatttccttgacattgatcggctgctctccgttctcattcagatcccaaagcaggaa
acggttcaagctgctgaatcaaagatcacgcatgtcatccagctgaaacacacactggat
ctggtgccacagttaaggacggagttaaagacatgcagcacagctcttctaaaagcatac
agcactacgcttgaggacaacagattcgagttgatccttgaacagatcaagacggtggta
aatgatgacaccacgtatttaaaaggcagcctgaacatgcggacccagaagtgttacgct
gtgcggcccaacatcaatgagttccttgacattgctcgcagagtttacactgagattgta
gacgacattgcaggactggtgaaccagttaggggagaaatacggcttaccattgcgcacc
agtttcagcacgtctcgagggttctttatccagatgaagctggatggagtggtcttacct
gagggcatcctcccccaagagttcatcaaggtcagtaagtacaggaacaactacagcttc
actactgcaaacctaataaagatgaatggacgctgcgatgaggctctgagggaaatattt
cacatgtcttatgtggtgatatgccagctgctaaccggaatccatgagcacatccactgc
ctttataaactctctgacactgtttccatgttggacatgttgctctcgctggccagtgca
tgcacaatctcagattatgtgcgtccagagtttacagacaccctggccataaagcaaggt
cgtcaccccattctggagcgactggcccgacagcagccggtctcgaacaatagctacatc
tccgagggcagcaattttgtcatcataacagggcccaacatgagcggcaaatccacatac
ctcaaacaggtggcgctgtgtcagatcatggcccaaataggctctttcgtcccagcggag
tatgcctcgttccggatcgctgatcagattttcaccagaattggtgttgatgatgacttt
gaaaccaactgctccaccttcatgttggaaatgaaggagatctcgtatattatacacaat
gcgagtgacaggtcactgatcatcatagatgaactggggcgtggcactagtgctgaggaa
ggcattggaatctgtcatgcagtttgtgagttcctccttggcctaaaggccttcactctg
tttgctacacactttttagagctctgtcagctggagtctctctatcctaacgtggaaaac
cagcacatggaggttcagcacacacgcagcagagactctggcacagagcaagtggtgtat
acatatctgctgagtcgagggtgctatgaggaaaagcactatggtctgagagccgctgag
atgacctcacttcctcctagtataatccaagaggcgaagtcaatggcctctaaaatcagc
cagcagcttctggccaaatatcccactgatccagaaacacagagacagagagcagtgtac
cgcctggccactcgcctattgcagactgccagaaattcaagacttgacccagagagcctg
cgcatgtatctgaaaggactgaagaggcagtatgaggcggagttgcaggctgcaagccca
gcaagacccacagactccggggattag
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