Cyprinodon tularosa (White Sands pupfish): 119787544
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Entry
119787544 CDS
T07496
Symbol
mlh3
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
119787544 (mlh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctul03400
]
119787544 (mlh3)
DNA repair and recombination proteins [BR:
ctul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
119787544 (mlh3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HATPase_c_3
MutL_C
DNA_mis_repair
HATPase_c
WW
Motif
Other DBs
NCBI-GeneID:
119787544
NCBI-ProteinID:
XP_038147400
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All DBs
Position
Unknown
AA seq
1121 aa
AA seq
DB search
MIRCLPAEVQGKLRSGVALPSLQQCVEELVLNSIDAGATCVGVRVDMDAFKVQVIDNGSG
MTAEDMERVGIRYHTSKCSRVEDLENLTCYGFRGEALASIISLAMLVEISSRTKMSVKTH
VKLFKDGQSMGVCEADTARPSAGTTVIICNFFHNMPVRRKRMDVVMEGERIRQRVEAVSL
MHPSVSFTLKNDLTGVMMVQLPKARDTYHRFVQIHSLARAEKLGDISHTHKQFEVSGYLG
KEGHYNNSLQYLYVNERLLLKTRIHKLLNCLLRRLSGSNQKHDNSDGTSLIRSPKHKRNQ
DLYGVYIINIKCSYSEYDICLEPAKTLVEFKDWDGVLLCVEEAVKAFLKRENLVSLFYQE
DLDCASPKVFGTERTDKKEEAISSTTIDCSVGIKLSSGFVHRRSANDGNECRADEFPQCQ
QMDVDLNEFEKMPLCDPEPASTVLNEKNEPTVSESAENLDKQKRAECAVWSEQEIQQIGD
DSHPVSQIPTCQLESKFNSNTLQGPVRKISLSDPYVHQSLQIKDLSRSDRSSSQVQDLKL
KFERKFTASKRQMPLDLNLHGASQKPCKDQFTAIPSKIPKVNPVRKLSAFKLPGSLDKFR
QMYGKSVANFSQNLSLAKNPARLSCEEHKQDQVTDSQSRATPTADPKGGQISLAAKLCHL
KQHMEEDVEIPQQTCMNIPEDPGTLSICTDFTQDRINSQNNKAEPSLDGCKHQMDEDEDG
SACSDWLHHYDTSVGKTVYINKKTGLSRYEDPALKDTQVPCTSDVSNMAVSIFSEMGVEY
RCYPFQLDLVLPFLPNPRQGRVISSGNDCRDGADQSSNSLSSLYSKWKNPVFVRPPTIGV
DISTGQADELAVKIHNILFPYRFSKNMIHSMKVVNQVDKKFLACLIDTSDEGSAAQTETQ
GNLLVLVDQHAAHERIRLENLITDSYKDDQDGSREKRLCSSTILPPLEINVTEEELRLLR
SSQPHLKSLGLEVTFSKTGAPKVFVGKVPLCFMEKESNELKRGRPSVIKPIVEEYLREQT
ELLRQTGRIGGPLPLTVLKVLSSLACHGAIKFNDTLSRDECRSLVASLSSCQLPFQCAHG
RPSIAPLVDLLHLDEDQKDFQKPNLKRLRRMYKAWELYGNK
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgataaggtgcttgcccgcggaggttcaaggaaaacttcgctcaggtgttgccttaccg
tccctccagcaatgtgtggaggagctagttctaaatagcatcgatgcaggggccacctgt
gtgggcgtcagggtcgacatggatgcgttcaaggtccaggtgatcgacaatggatccggg
atgaccgctgaggacatggagcgtgtgggaatccgataccacaccagtaaatgcagccgt
gttgaagacctggagaacctcacatgttatggcttcagaggagaagccctggcgagcatc
atttctctagccatgctggttgaaatctcctcccggaccaaaatgtcagtgaaaactcat
gttaaactgtttaaggatggccagagcatgggcgtctgtgaggcagacactgctcgaccc
tctgcagggacaactgttatcatttgtaactttttccacaacatgcctgtccgtaggaag
agaatggatgtagtcatggagggggagaggatcagacagagagtggaggctgtgtccctg
atgcatccctctgtgtccttcaccctgaagaatgacctcacaggggtcatgatggtgcag
cttccaaaagccagagacacctatcaccgctttgttcaaatacacagcctggcccgggca
gagaaactgggagacatcagccacacacacaagcagtttgaagtgagtggttacctgggc
aaagagggacactacaacaacagtttgcagtacctgtatgtgaacgagagacttctgcta
aaaacacggatccacaagctgctcaactgtctcctgcgccggctgagcggctccaatcag
aagcatgacaactcagacggcacctctttgattcggagtccaaagcataaacgaaatcag
gatctatatggagtgtacatcattaatataaagtgttcctattcggagtatgacatctgt
ctggagccagcaaaaactctggttgaatttaaagactgggatggtgtcttgctttgcgta
gaggaagcagttaaagcttttcttaagcgggagaacttggtgtccttgttttatcaagaa
gatctggactgtgcgtcccctaaagtttttggtacagaaagaacagacaaaaaagaggaa
gctattagttctaccacaattgactgcagtgttggaataaaattgtcatctggttttgtt
catcgtaggagtgctaatgacggcaatgagtgcagagctgatgaatttccacaatgtcag
caaatggatgtggatttgaatgaatttgagaagatgccactttgtgatccggagcctgca
tcaactgttctgaatgagaaaaacgagccaacagtctctgaaagtgctgaaaatttagac
aagcaaaagagagcagaatgtgcagtttggagtgagcaagaaatccaacagattggtgac
gattcacaccctgtcagccaaattccaacatgtcagctagagtcaaagtttaatagtaac
acattgcagggtcctgtcagaaagattagcttgtctgacccgtatgttcaccaaagttta
cagataaaagacctgtcccgaagcgacaggtcttcatctcaggttcaagatttaaagcta
aagtttgagaggaaattcacagcttcaaaacgccaaatgccacttgatttaaacttgcat
ggcgcctctcagaaaccatgcaaagaccagtttacggcgatcccatcaaagattcccaaa
gttaatcctgttaggaagttatcagcattcaagctgccaggttcgctcgataagtttaga
caaatgtacggtaaatctgtggcaaatttttctcaaaatttgagcttggctaaaaaccct
gctcgtttgtcttgtgaagaacataaacaagatcaagttacagactctcaaagccgagca
acacctacagctgatcccaaaggtggtcaaatatctttggcagctaaactctgtcatttg
aaacaacacatggaagaagatgtagaaatcccacagcaaacttgcatgaatattccagaa
gacccaggcactctcagcatttgtacagattttacccaggacaggatcaatagccagaac
aataaagctgaaccttcactcgacggctgtaaacatcagatggatgaggatgaggatggc
tcagcatgcagtgactggctccatcactatgatacatctgttggaaaaacagtttatatc
aacaaaaagactgggctcagcagatacgaggacccggctttaaaagacacacaagtaccg
tgtacatctgatgtctccaacatggctgttagcatcttctctgaaatgggtgtggaatac
agatgttacccatttcagctggatttagtgttgcctttcctgcctaatcccaggcaagga
agagtgattagctcaggaaatgactgtagagatggtgcagaccagagctccaactcactt
tcttcattatactctaaatggaaaaatccagtgtttgttcgcccacctacgattggggtg
gatatatccactggacaagctgatgaacttgctgtgaagatccacaacatcctgtttcca
taccgcttttctaagaatatgattcactccatgaaggttgtgaatcaagtggataaaaag
tttcttgcatgccttattgataccagtgatgagggttccgctgcacagactgaaactcaa
ggtaacctgctggtcttggtagatcagcacgcagcacacgagaggattcgacttgaaaat
ttaatcacagattcatacaaagacgaccaggatggctccagggagaaacgtctctgttca
tcaaccattttaccccctttggaaatcaatgtgacggaagaggagctcaggctgcttagg
tcttctcagccacatttaaagagtttgggcctggaagttaccttctcaaagaccggagct
ccaaaggtttttgtgggaaaggtgccgctgtgcttcatggaaaaagaaagtaatgagctt
aagcgaggaagaccgtctgtcatcaagcctattgttgaggagtatcttcgagagcagact
gagttactccgtcaaacaggcagaattggaggccctttgccacttactgttttgaaagtc
ctctcctcgttggcatgccatggtgccatcaagtttaatgacactctaagcagagacgag
tgccgcagcctggtagcgtccttgtcttcatgccagctgcccttccagtgcgcccacggc
cgcccctctattgctcctctcgtagacctccttcatctggacgaggaccagaaggacttc
cagaaaccaaacctgaaaaggctaagaagaatgtataaagcatgggagctttatggaaat
aaataa
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