Cyprinodon tularosa (White Sands pupfish): 119787927
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Entry
119787927 CDS
T07496
Symbol
robo1
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
119787927 (robo1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ctul04515
]
119787927 (robo1)
Cell adhesion molecules [BR:
ctul04515
]
Immunoglobulin superfamily
ROBO family
119787927 (robo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Pur_ac_phosph_N
Ig_5
FN3_DSCAM-DSCAML_C
Unc5_NetrinR_N
Ig_PDGFR_d4
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
119787927
NCBI-ProteinID:
XP_038147925
LinkDB
All DBs
Position
Unknown
AA seq
1650 aa
AA seq
DB search
MMSPTSIGFVFFLAALHVCPGSRLRQEDTPPRIVEHPSDLIVSKGEPATLNCKAEGRPAP
TVEWYKDGERVETDKDNPRSQRMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAV
SHNASLEVAILRDDFRQNPADVIVAAGEPAVLECQPPRGHPEPTISWKKDGVNIDDRDER
ITIRGGKLMITNARKSDAGKYVCVGTNMVGERESETAELTVLERPSFVRRPSSTVVLVDQ
SVEFRCEARGDPVPTVRWRKDDGDLPKGRYEIREDHTLKIRRVISADVGSYTCVAENMVG
KAEASATLTVHVMSVPPAFVVRPRNQVVGVGRTVTFQCEATGNPQPAIFWQREGSQNLLF
SYQPPQPSSRFSVSQSGDLTITDAERSDVGYYSCQALNIAGSVITKALLEVTDVVSDRPP
PVIRQGPTNQTVAVDGTVVLNCVTSGNPTPTVLWKKDSVLVSTHDSRIKQLDTGALQIRY
AKLGDTGSYTCIASTPSGEASWKAYLEVQEFGSPVQPNRPTDPNLIPSAPSKPEVTDVSR
TSITLSWKPNLNSGATPTSYIIEAFSHTSGSSWQTLAEHVKTESFILKGLKPNAVYLFLV
RAANAYGLSDPSAISDAVKTQDIPPTSQGIDHRQIQRELADVVIHLHNPTILSSSSVRVQ
WTVEQQSQYVQGYKVLYRLSPESQQRREWSVFEVRTPGEDSAVVTQLRKGVTYEFKVRPF
FNEFQGTDSDVKIGKTLEEAPSAPPRKVTVTESEGNGTAVVVSWQPPPEEEQNGVLQEYK
IWCLGNESKYHINKTVDGSTLSVMIPSLIPGIRYSVEVAASTSAGPGVKSETTFFQFDSS
GRMAETMNQENPLSQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLSSSYA
GIRKVPSFTFTPTVAYQRGGEGVSTAGRPGLLNMGDSATQPWLADTWPNSCSKHNDCSIN
CCTAGNGNSDSNLATYSRPADCIANYNSQMDNKQTNLMVPESGVYGDVDLSNKINEMKTF
NSPNLKDGRFVGPGGQPTPYATTQLIQSAIMGNNINSDRGTGGSGGGLGSGGELNEKHCW
KPPSVQQKQEMGSQLQYNILEQNKLNKDRYRGGDSPLPATIPYNQTHDTHTGGSYSSDRG
SSSTSGSQGHKKGMRTPRLAKQSPMNWADLLPPPPANPAPVRSTEEYSLSMEESYDHDMQ
CPMPPSHMYLQPDELEEEEEMERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEEMQPM
LQDASDSHERRRHGVSPPPPPRPLSPSHTYGYISSPLALDTDGLEEEEDILEEEEEEDGE
TDAEVAKMHYHHTHPHTHPHQPQMQARRLLIRGLEQTPASSMGDLESSVTGSMINGWGSA
SEEDNVSSGRSSAISSSDGSFFTDADFAQAVAAAAEYSGLRVAKYPSPQGQEVGGASVRK
YQINQSGHRPGSPVSTDSNMSMAAIHRRPPKRQKQHPAGHPGSQRREVFNEDLPPPPIPP
PAVLKSPTHPSKTALEGRGVISPKAGEGPDKRGGGYRPQEGSDPRTSSSERKDAQDRQKT
APGGKGNKPESSTANKPRQNIGPEDILPYSRPQFPTVNSPRDPSSSSSMSSRGSGGRRRG
EGTRRNPGDMTVNNSVAFHQGEEELEMLES
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctccaacttccatcggatttgtatttttcttagctgctctccatgtgtgccca
ggatctcggctgcggcaagaggacaccccacctaggattgtagagcacccatcggacctt
attgtatcaaaaggggagcctgccactcttaactgcaaggcggagggacggcctgcccca
actgttgagtggtacaaagatggtgagcgggtggaaacagacaaggacaatccccgttcc
cagcgcatgctgttgcccagcggctcccttttcttccttcggattgtccatggaagacga
agcaaaccagatgaaggttcctatgtctgtgttgctcgcaactacctgggagaggcagtg
agccacaatgcctcactggaagtagcaattctacgagatgacttcaggcaaaaccctgca
gatgtgatagttgcagctggagaaccggctgtcttggagtgtcagccaccacgtggtcat
ccagagccaaccatatcatggaaaaaagacggagtaaatattgatgacagagatgaaagg
attactatacgtggaggcaagctgatgatcacaaacgctcgcaaaagcgacgccggaaag
tatgtgtgcgtcggcacaaatatggttggagagcgtgaaagtgaaactgctgaacttaca
gtgctggagcgtccaagctttgtgcgtcgcccaagcagcacagtggtcttagtggaccaa
agtgtggagttcaggtgtgaggctcgaggggacccagttccaactgtacgctggaggaaa
gacgatggcgacctgcccaaaggacgatatgagatccgtgaggaccacaccttgaagata
cgacgtgtgatctcggctgatgtaggctcctacacttgtgtggccgaaaacatggtgggc
aaggcggaggcatcagccacgctcaccgtccatgtcatgtctgtgcccccagcatttgtg
gtgagaccgaggaaccaggtggttggagttggcaggacagtcaccttccaatgtgaggcc
actgggaaccctcaaccagccattttttggcagagggaagggagtcagaacctcctgttc
tcctaccaaccaccacaaccgtccagccgattttctgtatctcaaagtggggatctgact
atcacagatgcagaacggtctgacgtgggatattacagctgccaggccctgaacattgct
ggcagtgtgatcaccaaggccctgcttgaggttacagatgttgtgtcagaccgcccgcca
ccggttatacgacaggggcccaccaatcaaacggtggctgtggatggaactgtggtccta
aattgtgtgacatctggtaaccccacacccaccgtcctgtggaagaaggacagcgtttta
gtgtctacacatgactcaaggatcaaacagttggacacaggggcactacagataagatat
gcaaagcttggggacacaggctcctacacctgcattgcctccacccccagtggagaagct
tcatggaaagcctatttagaagttcaagaatttggatctccagtccagccaaacagacca
acagacccaaacttgatacctagcgctccttcaaaaccagaggttacagatgttagccgg
acctccatcactttatcctggaaaccaaatctcaactctggagccacaccaacctcctat
ataatagaggcctttagccatacatccgggagtagctggcaaaccttggcagagcatgtg
aaaaccgagtcattcatactgaagggcctaaagcctaatgcagtctacctcttcttggtg
cgagcagccaatgcatacgggctcagtgatccaagtgctatctcggatgcagtgaaaaca
caagacatccctcccaccagccaaggtatagaccatcgacagatccagagagaacttgct
gatgtggtcatccacctccacaaccccaccatcctctcatcctcctctgtcagagtgcag
tggacagtggaacagcaatcacaatatgttcagggctacaaagtgctgtacaggctgtca
ccagagagccagcagaggagagaatggtcagtgtttgaggtccggactcctggagaggac
agcgcagtggtgacgcagctccgaaagggtgtcacatatgaattcaaagtccgccccttc
ttcaacgagtttcagggaacagacagtgatgttaaaattggcaagacactggaggaagcc
cccagcgcaccgcctcgtaaggtaacagtgacagagagtgagggcaatgggaccgccgtt
gtcgtctcctggcaaccccctcctgaagaggaacagaacggggtgctacaggagtacaag
atttggtgcttggggaatgagagcaagtatcacattaacaaaacggttgatgggtcaaca
ttgtcggtaatgattcccagtttgatacctgggatccgatacagcgttgaggtagcagcc
agcaccagtgccggtcctggggtgaagagtgaaactactttctttcagtttgattcatct
ggacgaatggctgagaccatgaaccaggagaaccctctctcccagcagatctcagatgtg
gtcaaacagccggcctttatcgcgggaattggagcagcatgctggatcatccttatggtc
ttcagtatctggttatacaggcatagaaaaaaaaggaatggcctctccagcagctatgca
ggcatacgcaaagttccatcttttacattcacaccgacagtggcataccagaggggtggg
gaaggcgtcagcactgctggaaggcctggtttgctaaacatgggtgactctgccactcaa
ccctggctggccgacacgtggcccaattcctgctccaagcacaatgactgcagcatcaac
tgctgcactgcaggcaacggcaacagcgacagcaacctggcaacatacagccgaccagcc
gactgtatcgccaattataacagccagatggataacaagcagaccaacctcatggtgcca
gagtcgggagtctatggagatgtagacctgtctaacaagatcaatgaaatgaagaccttc
aacagcccaaacctaaaggacgggcgctttgtcggtccaggggggcagccgacaccttac
gccaccacacagctcatccagtccgccatcatgggcaacaacataaactcagacagaggg
accggagggagtggaggcggacttggaagtggaggggaattaaatgagaagcactgctgg
aaacctccctcagtccaacagaaacaggaaatgggctcccagcttcagtacaacatcttg
gagcaaaacaaactgaataaggaccgatacagaggaggcgacagcccattgcctgctacc
atcccctacaaccagactcatgacactcacaccgggggctcctatagctctgaccgaggc
agcagtagcacctctgggagtcagggtcataagaaggggatgcgcacccccagactagcc
aaacaaagcccaatgaattgggctgaccttctcccccctcctcctgcaaacccagcccca
gtgcggagcactgaggagtattccctctctatggaggaaagctatgatcatgacatgcag
tgccccatgcccccctctcacatgtacctgcaaccagatgagctggaggaggaggaggag
atggagaggggtcccactcctcccgtacgcggggcagcctcttcccctgctgctgtgtcc
tacagccatcagtccacagccactctcaccccctctccccaggaggagatgcaacccatg
cttcaggatgcatcagacagtcatgaacgcagacgccatggtgtgagccctccacctcct
ccaaggcccctctccccttcacacacatatgggtatatcagcagccctctggctttggac
actgacggtctggaggaggaggaggatatactggaggaagaggaggaggaggatggtgaa
acggacgcagaagtggccaaaatgcactaccaccatacccacccccacacacaccctcac
caaccccagatgcaagcaaggaggttgctaataagaggacttgagcagacgcctgcgtcc
agcatgggtgacctggagagctcggtgacgggctccatgataaacggatgggggtctgcc
tctgaggaggataatgtctcctcggggagatcaagtgcaatcagctcatcagatggctcc
ttcttcacagacgcggactttgctcaagcagttgctgcagccgcagagtattcagggctg
agggtggcaaagtaccctagtccacaaggccaggaagtaggaggagcttcagtgcgaaaa
taccaaataaaccagtcaggccatcgtcctggcagcccagtgtctacagatagtaatatg
agtatggcagctattcacaggaggcctccaaagaggcaaaaacagcaccctgcaggacat
ccaggcagccagcgacgtgaggtctttaatgaagatctccctcctccacccattcctcct
ccagcagtgctcaagtctcccacacatccctccaagacagcactggagggtcggggagta
atttcccccaaagcgggggaaggtccagacaagcggggaggtggctatcggccacaggaa
ggctcagaccccagaaccagctcatctgaacgtaaagacgctcaggatagacaaaagact
gctcctggagggaaagggaataaacctgagagcagcactgccaacaaaccacggcagaac
ataggtccagaggacattctgccatatagccgaccacagttcccaacagtcaacagcccc
agagatccaagctcctcgagctctatgtcctctaggggctcgggggggcggcgaagaggg
gaagggacacgcaggaaccctggagacatgactgtcaacaactctgtagctttccaccaa
ggagaggaagaactggagatgctagaaagctga
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integrated database retrieval system
