Cyprinodon tularosa (White Sands pupfish): 119788448
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Entry
119788448 CDS
T07496
Symbol
slit2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ctul00536
]
119788448 (slit2)
Glycosaminoglycan binding proteins [BR:
ctul00536
]
Heparan sulfate / Heparin
Axon guidance molecules
119788448 (slit2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
EGF
LRR_4
LRR_5
Laminin_G_2
LRRNT
Laminin_G_1
LRR_9
LRRCT
hEGF
LRR_1
EGF_TEN
LRR_14
EGF_DL_JAG
JAG1-like_EGF2
Laminin_G_3
EGF_Teneurin
EGF_3
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
119788448
NCBI-ProteinID:
XP_038148711
LinkDB
All DBs
Position
Unknown
AA seq
1582 aa
AA seq
DB search
MVGLVRSVGLVRSWETEPRLLLLGTALLLVLLSKADGQPCPPPCSCTGTTVDCHGQGLRS
VPRNIPRNTERLDLNANNLTKIAKGDFAGLRHLRVLQLMENKITTIERGAFQDLKELERL
RLNRNNLAVFPELLFLGTAKLHRLDLSENQIQGIPRKAFRGAVEIKNLQLDYNHISCIED
GAFRALRDLEVLTLNNNNISRLSVASFNHMPKLRTFRLHSNNLQCDCHVAWLSEWLRQRP
RLGLYTQCMAPPHLRGHNVAEVQKKEFVCTGHQSSSSSSCSVLQCPESCTCSNNIVDCRG
KGLTEIPTNLPETITEIRLEQNAIKVIPAGAFSPYKKLRRIDLSNNQISELASDAFQGLR
SLNSLVLYGNKITEISKGLFEGLFSLQLLLLNANKIACLRVDAFQDLHNLNLLSLYDNKL
QTIAKGTFSSLRAIQTLHLAQNPFICDCHLKWLADYLQDNPIETSGARCTSPRRLANKRI
GQIKSKKFRCSAREQYIIPGVHHVSCNEDYRSKLGGDCFADLACPEKCRCEGTTVDCSNQ
KLTKIPDHIPQYTTELRLNNNEFTVLEATGIFKKLPQLRKINLSNNRISDIEEGTFEGAS
GVNELILTSNRLENIHHRMLKGLSGLRTLMLRSNKISCVSNSSFVGLSSVRLLSLYDNQI
TSMSPGAFDTLHSLSTLNLLANPFNCNCHLAWLGDWLRRKRIVTGNPRCQNPYFLKEIPI
QDVAVQDFACEDGNNENSCSPILRCPAECSCLDTVVRCSNKGLTTLPKGVPKETTELYLD
GNHFTQVPVELSNYKHLTLIDLSNNQISTLSNHSLSNMSELLTLILSYNRLRCIPVRAFD
GLRSLRLLSLHGNDISLIPEGAFKDLSSLSHLALGANPLYCDCHMQWLSDWVKSGYKEPG
IARCAGPGDMTDKLLLTTPSKKFTCTGPVDLSIQAKCDPCLSSPCKNDGTCSSDPVHYYR
CTCPYGFKGQNCEEPIHACIGNPCQNGGTCHLKEGEGSNFWCVCPEGFEGDTCEINIDDC
EDNDCENNSTCVDGINNYTCMCSPEYTAATNEVERGELCEEKLDFCAPELNPCQHDSKCI
LTPQGYKCECTPGYVGEHCELDYDDCEENKCQNGGHCIDAVNGYTCICPEGYSGLFCQFT
PPMVLPRTSPCDNHDCLNGAQCVVVGTDPRCQCLHGYEGEHCETLVSVNFVNRESYLQLP
SNLLSPQTNISLQIATDEDSGVLLYKGDDDHIAMELYRGRLRVSYDTGSYPPSAIYSVET
VNDGSFHSVELVAADQTLSLSIDGGPPKSISSINKQSTLSIDSPLYLGGMPEKASGSGGF
SALQLSSGGRNGTSFHGCLRNLYINGKLQNLGAGQDQDTPAPGNLQNNRQWLGNGVEPGC
QPCQRDTCIQGDCHPTGHQGFTCTCHPGWTGALCDQQVTNPCDGNKCIHGTCLPINSYSY
SCRCQPGFSGVLCDGQDLDTANPCSASHCKHGRCRVSGLGKAYCECNSGYTGEACDREVA
CRGERVRDVYQRQQGYAACQTQEKISRLECRGSCPGGTEGQGTCCTPLRSKRRKYTFQCT
DGSSFVQEVEKVVKCGCTKCSS
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atggtgggattagtgcgctctgttggccttgtccgttcctgggagactgaaccgaggcta
ctgctgctggggaccgctctgctcctggtcctgttgagcaaagcggacggtcagccgtgc
ccccctccatgctcctgcactgggaccacagtggactgtcacggccagggactgcgcagc
gtccccaggaacatccccaggaacacagagagactggatctgaacgcaaacaatctcaca
aaaatcgccaaaggggattttgcaggactgaggcatctgagagtcctgcagttaatggag
aacaaaatcacaacgattgaaagaggagcgttccaggacctgaaggagctggagagactc
cgactgaatcggaataatttggccgtgtttcctgagctacttttcctgggaacagccaag
cttcacagacttgacctgagtgaaaaccagatccaggggattccaaggaaagccttcagg
ggagctgtggaaatcaaaaacctacagttggactacaaccacattagttgcattgaagat
ggagcctttagggcgttacgtgacctggaagtgctcactctgaacaataacaacatcagc
cgactgtctgtggccagttttaaccacatgccaaagctcaggaccttccgccttcactcc
aacaacttgcagtgcgactgccatgtagcctggttgtccgagtggttacgacagcgcccc
cgcctgggcctctacacacagtgcatggctcctcctcacttgcgagggcacaatgtggct
gaggtgcagaagaaggagtttgtgtgcacaggtcatcagtcgtcatcatcttcctcctgc
agtgtgttacagtgcccagagtcctgcacctgcagtaacaacattgtggactgcagaggg
aagggtctgacagaaatacccaccaacctgcctgaaaccattactgagatacgactggag
cagaacgccatcaaggtgatcccagctggggccttttctccatataagaagctgcgcaga
atagatttgagtaacaaccagatctcagaactagcttcagatgccttccagggtctgcga
tcccttaattctttggtcctgtatgggaacaaaatcacagagatttccaagggactcttt
gaaggattgttttcactgcagttgttgttgctaaatgctaacaagatagcatgcctgcgt
gtggatgcatttcaggaccttcacaacctcaatctgctctctctatatgacaacaagctc
caaacaattgcaaaggggacgttctcctcactacgagcaatacaaacccttcatttagct
caaaacccatttatctgtgactgccatctgaagtggctggctgactacctgcaggacaat
cccattgagacgagtggtgcccgctgcaccagccctcggcggctcgccaacaagcggatc
ggacaaatcaagagcaagaagtttcgctgctcagctagagaacagtatatcatcccagga
gtacaccatgtcagctgtaacgaggattaccgcagcaagctcggaggtgattgcttcgcc
gacctggcctgcccagagaaatgccgttgtgagggcacgactgtcgactgctctaaccag
aaacttaccaaaatcccagatcacattcctcagtacaccactgagctgcgtctgaacaac
aatgagttcacggtgcttgaggcgacgggaatcttcaaaaagttgcctcagttgaggaag
attaatctgagtaataatcgtatcagtgacatcgaggaggggacttttgaaggagcttca
ggggtcaacgagttgattttgacctccaacagactagagaacatacaccaccgcatgctg
aagggactcagcggtctccgtactcttatgctgaggagtaacaagatcagctgtgtgagc
aacagcagcttcgtggggctcagttctgtacggctcctttcactgtacgacaaccagatc
acctctatgagccccggagccttcgacacactgcactccctctccacactaaacctcttg
gccaatccttttaactgtaactgccacctggcctggctcggtgattggctgagaaggaaa
cgcatcgtcacagggaatcctcgctgccagaatccttatttcctaaaggagattcccatc
caggatgtagctgttcaggactttgcctgtgaagatggtaacaatgagaacagctgctct
cctattctgaggtgtccagccgagtgctcttgcctggatactgtggtgcgctgcagcaac
aaaggtctcacaactctgcccaaaggtgtcccaaaagaaaccactgaactgtatttggat
ggaaaccatttcacccaggttccagtggagctttcaaattacaaacacctaacacttatt
gatttgagtaacaaccagatcagcacgttgtccaaccacagcctcagtaacatgtctgag
ctgcttacactaatcctgagctacaaccgtctaagatgcatcccagtgagggcattcgat
ggtctcaggtctctccgtttgttatctctccatggtaacgacatatccttgattccagag
ggagcctttaaagacctgtcatccctgtctcatctggctctgggtgccaatcctttgtac
tgtgactgccacatgcagtggctgtctgactgggtgaagagtggctacaaagagcctggc
atcgcccgctgtgctgggcccggggacatgactgacaagctactcctaacaacaccctcc
aagaagtttacctgcacaggcccagtggatttgagtatccaggccaagtgtgatccgtgt
ttgtccagcccctgcaaaaatgacggcacatgctccagtgaccctgtgcactactaccgc
tgcacctgcccgtatggatttaagggacaaaactgtgaggaacccatccatgcctgcatc
ggtaacccctgccaaaatggaggaacttgccatctgaaggaaggagaaggaagcaatttt
tggtgtgtgtgtcctgagggctttgaaggcgatacttgtgagatcaacattgatgactgt
gaggataacgactgtgagaacaactccacctgcgtggatggaatcaacaactacacctgc
atgtgctccccagaatacacagctgctaccaatgaggtggagagaggagaattgtgtgag
gagaaactggacttctgcgccccagaactgaacccgtgtcaacacgactcaaagtgcatt
ctcacccctcagggatacaagtgtgagtgcactccaggctacgttggggagcattgtgag
ttggactatgatgactgtgaagagaacaagtgtcaaaacggaggtcactgcattgatgct
gttaatggatacacctgcatctgtccagagggatacagtgggcttttctgccagtttact
cccccaatggtcctccctcgaaccagtccctgtgacaaccacgactgcctaaatggagct
cagtgcgttgttgtgggaacagacccccgctgtcagtgtcttcatggctacgagggcgaa
cattgtgaaacgcttgtgagtgtaaactttgtcaaccgggagtcctacctgcaacttccc
tccaacctcctctcaccacagaccaacatcagcctacagattgctactgacgaggacagt
ggcgtcttactgtacaaaggtgatgatgatcacattgcaatggagctgtacagaggacgt
ctcagggtcagctacgacactggatcctacccaccttctgcgatatacagtgtggagaca
gtaaacgatggcagtttccactctgtggagttagtagcagctgaccagactctgtctctg
tccattgatggcggaccacccaaatccatcagctccatcaacaaacagtccaccctcagc
attgattccccactttacctgggaggaatgccagaaaaggcttcaggctctggtggcttt
tctgcccttcaactcagctcaggaggccgcaacggtacaagcttccatggatgccttcgt
aatctttacatcaacggaaagctccagaacttgggagcagggcaggaccaagacactcca
gctccagggaatttacagaacaacagacaatggcttggaaatggggtggagccgggctgc
cagccatgccagagagatacttgcatccagggtgactgccacccaacaggtcaccaagga
ttcacctgtacctgccatccaggatggactggggctctgtgtgaccagcaagttaccaat
ccttgtgatggcaataagtgtattcatggtacctgccttccaataaactcttactcctac
tcctgtcggtgccagcctggtttctccggtgttctatgtgatggtcaggacctggatacg
gccaatccttgtagcgcgtcccattgcaagcatggcagatgtcgagtgtcaggcttggga
aaagcatactgcgagtgcaacagtggatacacaggggaggcatgtgaccgagaggtggcc
tgccgaggggaacgggtcagagatgtctaccagagacagcaaggctatgcggcgtgccaa
acccaggagaagatctcccgtttagagtgtcgaggcagctgcccagggggaacagaagga
cagggaacctgctgcacccccctccgcagcaaacgcaggaaatacaccttccagtgcact
gatgggtcttcttttgtccaggaagtggaaaaggttgtgaagtgcggctgtacaaagtgt
tcttcgtaa
DBGET
integrated database retrieval system
