Cyprinodon tularosa (White Sands pupfish): 119788847
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Entry
119788847 CDS
T07496
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119788847 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctul03019
]
119788847 (dhx36)
03012 Translation factors [BR:
ctul03012
]
119788847 (dhx36)
Enzymes [BR:
ctul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119788847 (dhx36)
Messenger RNA biogenesis [BR:
ctul03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
119788847 (dhx36)
Translation factors [BR:
ctul03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
119788847 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
AAA_16
Motif
Other DBs
NCBI-GeneID:
119788847
NCBI-ProteinID:
XP_038149433
LinkDB
All DBs
Position
Unknown
AA seq
1073 aa
AA seq
DB search
MSYRYEGGGGGRRSRRGGRGYRDGSRERLERRGGGCGRGARGNGSNFDQDSEGQNDRPPP
HLRGREIGLWYARYGAVRRKQADRRSRAVVHMDEARQEHITKLLNSVQSDQPDPGRSSRD
GYSSMSDNWQTAASSSSHCYFDGDLPEEEKHKSEEEEEEITSKQKKPNSTSKGASSAKAD
KDEPPDNWDEGDEEEEKEKVEKERPIRNDKDVEFLLQEVVRDPLMDEELKRDLQSKKTDP
SYKEMLKFREKLPSYSKREDLVRLINSNPVVVVSGETGCGKTTQVTQFILDDHINRGRGS
TCRVVCTQPRRISAISIAERVAAERAERVGNGKSCGYQIRLQSRLPRRQGSILYCTTGII
LQWLRSDPMLSSVSHLVLDEIHERNLQSDVLLIIVKELLNVRDDLKVILMSATLNAEKFS
KYFDKCPMIHIPGLTFPVEEFLLEEIIEMTRYRPLNTDRNPAWKRRFWQGRQSSSGKEEK
ELEYKESWPSYARTLQGRYSDSTIEAVEMLDNDEKIDLELILALIRYIVLNEGEGAILVF
LPGWDNISGLNDLLMAQQMFRSENFVIIPLHSLMPTVNQTQVFKRPPPGVRKIVIATNIA
ETSITIDDVVFVIDGGKIKETNFDSDNNISTMLAEWVSLANAKQRKGRAGRVQPGKCYHL
YNGLRASMLEAYQLPEIMRTPLEELCLQIKILKLGSISHFLEKAMDPPSQKAVNLAIKNL
TDLNALDHRENLTALGVHLARLPVEPHTGKLILFGALFGCLDPVLTIAASLSFKDPFFIP
LGKEKMADMRRRTLSRNSKSDHLTIVYAFKGWEEAKQRGARYEREYCWDNFLSANTLQML
HNMKGQFAEHLMHAGFVSSRNPKDPISNVNSDNEKLIKAVIVAGLYPKVAMIRPSYSKKR
PGVKVYTQSDGKVCIHPKSVNVEETEFNYTWLIYHLKMKTSSIFLYDCTEVSPFSLLFFG
GDISIQKEEGDETIAVDRWIVFRSPARIAHLVKSLKKELDSLLQEKISNPAPVDWNNRQS
KDCAVITAIIDLLTTQERPAGSSKDDGRMWASAPRGKHVYFNEDDDDDDDNDD
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcggtacgaaggtggagggggaggaagaagaagcaggagaggaggtagaggg
tacagggatgggagcagagagaggctggagagaagaggaggaggttgcggcagaggtgcg
agaggaaacggttccaactttgaccaggactcagagggtcagaatgaccgaccgcctcca
cacctgaggggccgggagatcggtctttggtacgctcggtatggagccgttaggaggaaa
caagctgaccgcagatcgagggcagtggtccatatggatgaagccagacaagagcacatc
accaagctgcttaactctgtccagagcgaccagccggaccctggtagatccagcagagac
ggatattcctccatgtctgacaactggcagacagctgccagcagtagcagtcactgctat
tttgatggggatttgcctgaagaagagaaacacaagtctgaggaagaagaagaagaaatt
acttctaaacagaagaaaccaaatagcacatcaaaaggtgcatcgtctgctaaggcagat
aaagatgagccaccagacaactgggatgaaggtgatgaggaagaggagaaggagaaggtg
gaaaaagaaaggccgataaggaatgacaaggatgtggagttcttgcttcaggaagtagtc
agagaccctttaatggatgaggagttgaaaagagatctgcaaagcaaaaaaacagacccg
agttacaaagaaatgctgaaattcagggaaaaactaccatcatattctaaaagggaggat
ctggttagactgatcaactctaaccccgtggtagtggtcagtggggagacgggctgtgga
aagaccactcaggtcactcagttcatcctggatgatcacatcaatagaggccgaggctca
acgtgccgtgtggtctgcacacagcctcggcgcatcagtgccatctctatagcggagcgt
gtagcagctgaaagagcagaaagggtaggaaatgggaaatcttgcggttaccaaatccgc
ctgcagagccggttaccacggagacaaggttcgatactatattgtacgacaggaattatt
cttcagtggctacgctcagatccgatgttatccagtgtcagtcatctggtgttggatgag
atccatgaaaggaaccttcaatcagatgttttgctcatcattgtgaaggaattactcaac
gtccgagatgatcttaaagtcatcctgatgagtgccactctcaacgcagagaagttttct
aaatattttgacaaatgcccaatgatccacatcccggggttgacattcccagtggaggag
ttcctacttgaagaaattatagagatgaccagatatcgtccactgaatacagatcgtaac
cctgcatggaagaggcgattttggcagggccgccaatccagctcagggaaggaggagaag
gaactggaatacaaagaaagctggccaagttatgctcgcacgctgcagggcagatattct
gacagcaccattgaggctgtggagatgttagacaacgatgagaagattgatctggaactg
atcttggcactgatccgttatattgtgctcaatgagggggaaggagctatcttggttttc
ctgcctggctgggacaacatcagcggcctcaatgatctcctcatggctcaacagatgttc
cgatcagaaaattttgtcatcatccctctgcactccctcatgcccactgttaatcagacg
caggttttcaaaagacccccaccaggagttagaaagattgtgattgcaaccaacatagct
gagaccagcatcaccatagatgatgttgtttttgtgatagatggaggaaagattaaagag
accaactttgactctgacaacaacattagcaccatgttggctgagtgggttagcttggcc
aatgccaaacaaaggaaaggacgtgctggcagggtgcagccaggaaagtgttatcatctg
tacaatgggcttagggccagcatgctggaggcttatcaattgcctgaaattatgaggaca
ccgctggaggaactctgcttgcagataaagatactgaagcttggctccattagtcatttt
ttggagaaggccatggacccaccgagtcagaaggcagtcaacctcgccatcaagaacctc
acagacctgaatgccctggaccacagagagaatctgacagcgctgggtgttcacctggct
cgtctccctgtagagccacacactggcaaactgatcctgttcggagctctgtttggatgc
ctcgacccagtgctcaccatcgctgcttcgctcagcttcaaagaccctttcttcataccc
ctggggaaagagaagatggcagacatgaggagaagaactctatccagaaactccaagagt
gaccacctcactattgtctatgcctttaagggctgggaggaagccaaacagcggggagct
aggtatgagagagagtactgctgggacaacttcctgtctgctaacacactccagatgctt
cataacatgaaaggtcagtttgcagaacatctcatgcatgctggctttgtcagcagcagg
aaccccaaagaccctatatctaacgtcaactcagacaatgagaagttaattaaggccgtt
attgttgctggactgtaccctaaggtggcaatgatcagaccgtcttacagcaaaaagaga
ccaggggtaaaggtgtacacccagtctgacggaaaggtgtgcattcatcccaaatctgtc
aatgttgaagagacggagtttaattacacatggctcatttaccacctgaagatgaaaacc
agcagtatcttcctgtacgactgcactgaagtgtccccgttctccctgctgttctttgga
ggagacatcagcatccagaaagaagagggcgacgaaaccatcgctgtcgaccgctggatt
gtcttcagatccccagcgcgcattgcccatcttgttaagagtttgaagaaagagctggat
tcactgttacaagaaaaaatcagcaacccggctcctgtggactggaataaccggcagtcc
aaagactgtgctgtcatcacagcaatcatagatctcctcaccacccaagaaaggcctgca
ggcagcagcaaggacgatggcaggatgtgggcgtctgccccgagagggaagcacgtttac
tttaatgaggacgatgatgatgacgacgacaacgatgattaa
DBGET
integrated database retrieval system
