Cyprinodon tularosa (White Sands pupfish): 119789004
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Entry
119789004 CDS
T07496
Symbol
rnf6
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6 isoform X1
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ctul04121
]
119789004 (rnf6)
Enzymes [BR:
ctul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119789004 (rnf6)
Ubiquitin system [BR:
ctul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119789004 (rnf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING-like
zf-RING_4
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
119789004
NCBI-ProteinID:
XP_038149666
LinkDB
All DBs
Position
Unknown
AA seq
715 aa
AA seq
DB search
MDPPGGGSERRRQAERLRREEAYYNFINELSEEEYRLMRDGNLLGTPGEVTAEELRQRLD
GAKERVSSQPHTEQQSQTADAGDQQSSGSGGEERGAAGRGGAGSAEPGAESSNGDSLLEW
LNTFRRTGNATRSGQSGNQTWRAVSRTNPNSGEFRFSLEININHDQPEPGEHIETVSSVD
APELPVIPPNTSVHNASPLSSSRPSATPRPAPYPSPRPAIRRIETRRTRSSATALSVSSA
TLSPAEMAPAAPQRRGSTLHSSAPSPAVPSPPADQTAPFQQQVQNVEVEPGRSQTAASID
CPRVPPQDESQHQAVGQESRSSRTRSRGRVRRTATGSGAASRASRRSRSPLNRTSSVSST
QPRVSSTTGSTAPPGDPSGVTTSVSMETGGIVSEPDAVLESAVETVERASESPAAGAGSS
AVRRHPTIMLDLQVRRIRPGENRDRDSIASRTRSRARVAENTVTFESDSGGFRRTISRSE
RAGIRTYVSTIRIPLRRISETGLGEPNSTALRSILRQIMTGFGELSSLMETEASSESITP
SHGYVGAANGGSSRLHLNESGPNQVGTSEVVQGVEGQVSSEDEQVGQARLGAGVVSSADG
RSNSRDTNNLVENGTLPILRLAHFFLLNDEEDDEHPRGLTKEQIDNLSTRTYGQASLEGE
IGRACSVCINEYAQGNKLRRLPCSHEFHVHCIDRWLSENNTCPICRQPILAAHHD
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggaccctcctggtgggggaagcgaacggagaaggcaggcagagcgtcttcgacgggag
gaggcatactacaacttcattaatgaacttagtgaagaagagtaccgcctgatgagagat
ggcaatctgctggggacccctggcgaggtgactgcagaggagctccgtcagcgtcttgat
ggagcaaaggagcgtgtgtcgtcgcagccccacactgagcaacagtcacagactgctgat
gctggagatcagcagagcagcggcagtggaggagaggagagaggggctgcaggaagagga
ggggcagggagcgcagaacctggagcagaatcttctaatggtgattcattactggagtgg
ctgaatacattcagacgcactggtaatgctactcggagtggccagagtggcaaccagacg
tggagggcggtcagccggaccaatcccaacagtggggaatttcgtttcagcctggagatc
aacattaaccacgaccagcctgagccgggagagcatatagagacggtgagctctgtggac
gccccagagctgccagtgattcctccaaacacctctgtccacaatgcttcccccctctcc
agctctcggccttcagctacaccaaggccggctccgtacccctccccacgccctgccata
agaaggatcgagacccggcgcacacggagcagcgccaccgccctgtctgtgagctccgcc
acactttctcctgcagagatggctccagctgcccctcagaggcgaggatctactttgcac
tcttcagcaccttctcccgccgtccccagtcctcctgccgatcaaacggcgccgtttcaa
cagcaagtccagaatgtagaagtggagccggggcgtagccaaacggccgcttctatagac
tgtcctcgggtgccgcctcaggatgaatctcaacaccaggcagtgggacaggagtcccgc
agcagcaggactcgatcccgtggccgagtgcgcaggaccgcaacggggagcggggctgca
tctcgtgcatcaaggagaagtcgatcccctttgaacagaacgtctagtgtcagcagcacc
cagccacgggtcagcagtacaactggttctaccgcccctcctggtgatccgagtggtgtc
accacctctgtatccatggagactgggggaattgtttcagaacccgatgctgtgttggag
tcagccgtggaaactgtagagcgtgcgagtgagtctcccgcagccggagcaggaagctca
gcggtcagacgacatccaaccatcatgctggacttgcaggtgagacggattcgccctggt
gagaacagggaccgggacagcatcgccagcagaactcgatcccgcgcacgggtggcagag
aacacagtcacattcgaaagcgacagcggcgggtttaggcgcaccatctcccgctcggag
cgcgccggaattcgcacctacgtcagcaccatccggattccattaaggcgcatcagcgag
acgggcctcggagagcccaactccaccgcgctgcgctccatcttacgacaaataatgact
ggattcggggagctcagttctcttatggagacggaggcgagttcagagagcatcacaccc
agccacggatacgttggcgccgcaaacggcggcagcagtcgcctacatttaaatgagagc
gggcctaaccaggtggggacaagcgaggtcgttcagggggtggaggggcaggtgagtagt
gaggacgagcaggtggggcaggccagacttggggccggagtagtcagctctgcagacgga
cggtcaaacagcagagacaccaacaacctggtggagaacggcaccctgcccatcctgagg
ctggcacatttctttctactcaacgacgaggaagatgacgaacatcccagaggcctgacc
aaagagcagatcgacaatctatccacgcgtacctacggtcaggccagcctcgaaggcgag
atcggacgcgcctgcagcgtgtgcatcaacgaatacgcccaaggcaacaagctgcgtcgc
ttgccctgctcccacgagttccacgtccactgcatcgaccgctggctctccgaaaacaac
acctgccccatctgcaggcagcccatcctggcagcgcatcatgactga
DBGET
integrated database retrieval system
