| Entry |
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| Symbol |
pan3
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| Name |
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3
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| KO |
| K12572 | PAB-dependent poly(A)-specific ribonuclease subunit 3 |
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| Organism |
ctul Cyprinodon tularosa (White Sands pupfish)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:ctul00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119789069 (pan3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:ctul03019]
119789069 (pan3)
Messenger RNA biogenesis [BR:ctul03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119789069 (pan3)
mRNA degradation factors
3'-5' decay
Pan complex
119789069 (pan3)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
793 aa
MNSGLPPSAAPLGGTGIPNVKVKFCRYYAKDKTCFYGDECQFLHEDPSMGSMSLHGGGGS
PVPLPVAGGGGTPAGYSLGGTTAPVCPGGGGTGVSKKTEALGPAGTTLDGQLLTIPGMEG
PALSDANLTNSYFSSSFIGVNGFGSPAESKYTMMQRMTTSSSSPSLLNDGAKNFSHSTHD
PVNSSTSSLFSDFGALSISQRRKAPNPTASEFIPKGAPRMAAMTQSAVQAFPSPLFAHPG
LGGSTAALAPGMSLSAGSSPLHSPKITPQTSPAPRRRSHTPNPANYMVPTTASDQGAHVI
QKETVGGTTYFYTDNTPVPMAGMVFPTFHIYPPTAPHVAYMQPKANAPSFFMADELRQEL
IHRHLITIAQIDHSENPDVPSEVDSYHSLFPLEPLPPPNRMQKTSNFSYITSCYKAVNSK
DDLPYCLRRIQGFRLVNTKCMMLVDMWKKIQHSNTVTLREVFTTKAFGDHSLVFSYDFHA
GAETMFSRHFNDPAADSYFTKRKWGQHEPPPPRQHAGLLPESLIWAYIVQLSSALRTIHT
AGLACRVMDPSKILITGKTRLRVNCVGVFDVLTFDNSQTNHLALMPQYQQADLVSLGKVV
LALACNSLAGIQRENLQKAMELVSINYSSDLKNLILYLLTDQSRLRSVNDIMPMIGARFY
TQLDASQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPAWSETGDRYLLKLF
RDHLFHQVTEAGTPWIDLSHIVSCLNKLDAGVPEKISLVSRDEKSVLVVTYSDLKRCFDS
TFQELQAAAAGSL |
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| NT seq |
2382 nt +upstreamnt +downstreamnt
atgaacagtggactcccaccttccgctgctccgctcgggggtaccgggatacctaatgtc
aaggtaaagttttgccgatactacgcgaaagacaagacatgcttttacggagatgagtgc
cagttcctgcacgaggatccctccatgggaagcatgtcgctgcacggaggcggcggtagc
cccgtcccgctgcctgtggctggaggtggcgggacgccagcggggtattccctcggtggc
acgacggcaccggtctgcccaggcggcggagggaccggtgtgtccaagaaaactgaagca
ctggggcctgcgggcacgacgttggacggacagctgcttaccatcccagggatggagggt
ccagccctaagtgatgccaatctcaccaactcttacttcagcagcagcttcattggtgtc
aacgggtttggaagcccagcagagtcgaaatatacaatgatgcagcgaatgactaccagc
agcagctctcccagtcttctcaatgatggtgccaagaatttcagccacagcactcatgat
ccagtaaactcctcgacttcgtcactgttcagtgatttcggtgctcttagcatttcccag
aggagaaaggctcctaacccgacagcgagcgaattcatccctaagggcgctccgagaatg
gccgccatgacgcagtctgcagttcaggccttcccttctccgctctttgctcatcctggt
ctcgggggctccacagctgctttggcgccaggtatgtctttgtctgctggatcatctcct
ctccactccccaaaaatcacgcctcaaacctcacccgcccctcgtcgacggagtcacacc
ccgaaccctgccaactatatggtgcccaccactgcgtctgaccagggcgcacacgtcatt
cagaaagagaccgtaggggggacgacgtacttctacacagacaacaccccagtgccaatg
gcagggatggtgtttcctaccttccatatctacccccccactgccccccatgtggcttac
atgcagccaaaagccaacgccccgtccttcttcatggctgatgagctccgccaggaacta
attcacaggcatctaataaccatagcccaaattgaccactcagagaacccagatgtaccg
tccgaggtggacagctaccacagcctgtttcccctcgagcctctccctccacccaaccgc
atgcagaaaaccagcaacttcagctacatcacctcctgctacaaggcggtcaacagcaaa
gatgacctgccatactgcctgaggaggatacagggtttccgccttgttaataccaaatgc
atgatgctggtcgacatgtggaagaagattcagcactcgaacacagtgacgctgagagag
gtcttcacaactaaggcctttggagaccactctttggttttttcatacgacttccatgca
ggtgcagaaacgatgttcagcaggcattttaacgacccagcagcagactcgtacttcaca
aagaggaagtggggccagcatgaacctcctccaccacggcagcatgcaggccttcttcca
gagtcgctgatctgggcctacattgtccagcttagctcagccttgcggaccatccacaca
gccggccttgcctgtcgggttatggacccaagcaagatactcatcactggcaaaaccagg
ttacgggtgaactgcgtcggcgtgtttgatgtcttaacgtttgacaacagtcagaccaat
catcttgccctgatgccacagtaccagcaagctgatctagtatcgctggggaaggtggtg
ctggctttggcctgtaattcactagctggaatacagagggagaacctgcagaaagccatg
gagctggtgtctataaactactcttcggacctcaagaaccttattctgtacctgctgact
gatcagtctcgcctgcgcagcgtcaatgacatcatgcccatgattggagcacgcttctat
acgcaactcgatgcatcgcagatgaggaatgatgtcatcgaggaggaccttgcaaaggag
gtacaaaatggccgcctcttccgcctgcttgccaaacttggaaccatcaacgagcgacca
gagtttcagaaggacccggcgtggtctgagacaggtgaccgctaccttttgaagcttttc
cgggatcacctttttcaccaggtgacggaagcagggacgccgtggattgacctcagccac
attgtcagctgcctcaacaaactggacgcgggtgttcctgagaagatcagcttggtttcc
agggatgagaagagcgtccttgtcgtcacctattcggacctgaagcgctgcttcgacagc
accttccaggagctgcaggctgcagctgccggctctctgtag |
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