Cyprinodon tularosa (White Sands pupfish): 119789102
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Entry
119789102 CDS
T07496
Symbol
dis3
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119789102 (dis3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctul03019
]
119789102 (dis3)
Messenger RNA biogenesis [BR:
ctul03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
119789102 (dis3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
OB_HELZ2
Dis3l2_C_term
Motif
Other DBs
NCBI-GeneID:
119789102
NCBI-ProteinID:
XP_038149801
LinkDB
All DBs
Position
Unknown
AA seq
951 aa
AA seq
DB search
MLKSKTFVKKTRSGGVMKVVREHYLRDDIWCGSEICTECKQDSTVLQRDACIESNLCTFP
HYLVPDTNVVLHQIDVLEDPVICNVIILQTVLQEVRHRSAPVYKRLKDIIHEQGRHFYTF
TNEHHRETFIEREPGESANDRNDRAIRVAVKWYSQHLKTAESGPDGVRVVLLTNDQGNKQ
KAEDNGLLVYRFEEYIKSLIANTELVDRLALSNEDKNKIASSKILFPEHLPLSKIQAGIK
SGSFIQGTFRASRDNYLEATVFVQGEGEDSNEVLIQGLQNLNRAVHQDVVAVQLLPKNQW
VAPSSVVLQDEGAAKDDDVDGDEEEKLLKQSLTKSTRKATGKVVGIIKRSWRPFCGMLNV
SQIKESTRHLFTPADRRIPRIRIETRQASTLAGQRIMVAIDGWPKDSRYPNGHFVRSLGN
AGEKDTEEEVLLLEHDVPHQAFSQAVLSFLPKMPWIITPEDMAQRQDLRHLTVCSVDPPG
CTDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDKEAANRGTTVYLCGKRIDMVPE
LLSSNLCSLRSNVERFAFSCIWEMNHNAEILKTRFTKSVINSKASLTYAEAQMRIDDTNK
NDDITKSLRGLNKLAKILKRKRIENGALTLSSLEVRFHIDSETHDPIDLQTKELKETNSM
VEEFMLLANISVAQKIYDEFPECALLRKHPAPPPSNYDILMKAAKSKNVTIHVDSAKALA
DSLDGAKVDGFQYFNTLLRILATRCMMQAVYFCSGMDSDFHHYGLASPIYTHFTSPIRRY
ADIIVHRLLAVAIGADSTYPDLMDKHKQSALCNNLNYRHKMSQYAQRASVAFHTQLFFKT
RGILNEEGFVLFVRKNAIIVLIPKFGLEGTVFFDSKDKASPKLVFDEEGPTLKVEQHTFN
IFDKVKVTISLDDSNIQHQKIRMALIEPVIPGVSVPVPEAEPQAKKQKLDR
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagtctaaaaccttcgttaagaaaacccgatcaggcggggtgatgaaggtcgtg
cgagaacattatctgagagatgatatttggtgtggaagtgaaatctgcactgaatgcaaa
caagactccacagttcttcagagagacgcttgtattgagagcaatctgtgtacctttcct
cattatttggtccctgacaccaacgtagtgctccaccagatcgacgtgttagaagatccg
gtgatctgcaacgtgatcatcctgcagactgtgctgcaggaggttcgtcatcgcagcgct
ccagtttataaacggctgaaggatataatacatgagcaaggaagacacttctacacgttc
accaacgaacatcacagagaaacattcattgaacgggagccaggggagagcgccaatgac
cgtaatgaccgggcgatccgtgtggccgtcaaatggtacagccagcatctgaaaacagct
gagtctggcccagatggtgtcagagtggtcctcctcaccaacgatcaaggcaacaagcag
aaggctgaggacaacggcttgctggtgtacagatttgaggagtacatcaagagtctgata
gcaaacacagagctggtggaccggctggcattgtccaatgaagacaagaataaaattgcc
agcagtaaaatattgtttccggagcatcttcctttgtccaagatccaggcaggaatcaag
agtggctcgtttatccaaggcactttcagggccagcagggacaattatctggaggcgaca
gtgtttgtccagggagagggagaagacagcaatgaggttctgatccagggacttcagaac
ctcaacagagcagtgcaccaggatgtggtcgccgtgcagctgttgccaaagaatcagtgg
gtggcgccctcatcagtcgtgctgcaggatgaaggagcagcgaaggacgacgacgttgat
ggggacgaggaggaaaaattgctgaagcagtcactaactaaatcgaccaggaaggcaaca
ggaaaggtagtaggaatcatcaagaggagctggaggcccttctgtggcatgctgaatgtc
tcccaaatcaaagaatccacacgccatcttttcaccccggcagaccgccgtatcccacga
attcgcatcgaaacacgacaagcctcaactcttgcaggccaaaggatcatggtggccatt
gatggctggcccaaggactccagatacccaaatggccattttgtccgcagtctgggaaat
gctggggagaaggacacagaggaagaggtcttgcttctggagcatgatgttccacatcag
gccttctctcaggctgtgctcagtttccttcccaaaatgccttggatcatcacaccagag
gacatggcgcagaggcaggacctgaggcatttgacagtgtgtagcgtcgatcctccagga
tgtacagatatagacgatgctctgcactgtcgagagctggaaaatggaaaccttgaggta
ggagttcacattgccgatgtcagtcactttatcagacctgggaatgctctggataaagag
gccgccaaccgcggcaccactgtgtatttatgcggcaagagaatagacatggttcctgag
ctgcttagctccaatctttgttctctaaggtccaatgtggagaggtttgctttttcgtgt
atttgggagatgaatcacaatgcagaaatcctaaaaacccgattcactaaaagcgtcatt
aactcaaaggcatctctaacttatgccgaggcccagatgaggatagacgataccaacaag
aacgacgatattacaaaaagcctgaggggcctaaacaaactcgcaaagatcctcaagagg
aagaggatagaaaacggggcgctgacgctgtcctccttagaggttcgcttccacatcgac
agtgaaacccacgacccgattgacctgcaaactaaagaactcaaggagaccaactccatg
gtagaggagtttatgttgctcgccaatatttcagtcgcacagaagatttatgatgagttt
ccagagtgtgctttactgaggaaacatccagcgccgcctccatctaactacgacatcctg
atgaaggctgcaaagtccaagaatgtgacgatccacgtggattcagccaaggctctggcc
gattccctggacggggccaaagtggatggtttccagtattttaacacactcctgcgcata
ttagccacccgctgcatgatgcaggccgtctatttctgctctggcatggacagtgacttc
caccattacggtctggcctcgcccatttatacacacttcacctctcccattaggaggtat
gctgacatcatagtgcaccgcctgctggcggtggccataggagcagacagcacctaccct
gacttgatggacaaacacaaacagtcggcactttgcaacaacctgaactacagacacaaa
atgtctcagtacgcgcagagagcgtctgttgccttccacacacagctgttcttcaagacc
cggggaatactcaatgaagagggattcgttctgttcgtgaggaagaatgcgatcatcgtt
ttgatcccgaagttcggtctggaaggaaccgtcttcttcgactccaaagacaaagcttca
cctaaacttgtttttgacgaagagggtcccactctgaaggtggagcagcacacgttcaac
atattcgacaaggtgaaggttaccatcagcctggatgactccaacattcagcaccagaag
atccgcatggctctaatagaaccagtgatccctggtgttagtgttcctgtacctgaggca
gaaccacaagccaagaaacaaaaactggaccgctga
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