Cyprinodon tularosa (White Sands pupfish): 119789136
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Entry
119789136 CDS
T07496
Symbol
lrrc29
Name
(RefSeq) F-box/LRR-repeat protein 3
KO
K10275
F-box and leucine-rich repeat protein 9
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ctul04121
]
119789136 (lrrc29)
Ubiquitin system [BR:
ctul04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
119789136 (lrrc29)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_4
LRR_6
F-box-like
F-box
LRR_At5g56370
LRR_8
F-box_5
LRR_EndoS
LRR_At1g61320_AtMIF1
SAM_Ste50p
Motif
Other DBs
NCBI-GeneID:
119789136
NCBI-ProteinID:
XP_038149849
LinkDB
All DBs
Position
Unknown
AA seq
655 aa
AA seq
DB search
MEYSDDLPETPDLPLEIIVYILSFLPASDRKEASLVCRSWYNASQDLRFQRNVTFSFPAS
AASLALVRGLAKKPRCSLKISQLDGFSISRSLLTEVGLCLGSKVDSLALPGSSLTEASLL
DLLPRLTSLRRLDVRGLDSLFMSGAFLSREEHRRQVRSALSGLEELDLSDLRYLSDLTFT
RLTGCTPRLRRLSLAGCHIAFEFDPYRGSPVGAVEDSSALLSLRNLRRLLTEQSSTLKAL
DLSRTSITPESLRIIAQVQDLVLEELHLQGCRELTDYSVEVLIKHQPKLLKLDISGCTGL
TSRSVEAAARGLESLTHLSLSGDWRITEKGLAELLSVSSLLSLDLSECLHISGVELVKGL
KGSDTAKAKLEALSLRSSTYLRDPAVFSLAQLLGDSLRELDLTSCINVTDVSVYAISAYL
QKLEVLQLGWCKEVTDWGLLGMGQRSESEPDEEMGDKGPRFTRTFGNMGFFKPPRMPFEE
RPKLLTQNDLQRFRQQAGASLLALRRLRELDLSACAKLTDTSVTQVIHFPDLQRLSLSML
PELTDASLASVGRRCRSLTSLSLSHCPGITDRGVAQAAPYLQRLQHLYLSCCNNITDRTL
YLLMQHCRRLKTVDISRCKNISMTTVDLLQSQLPFLENVQHKLIGVADLPLTDCF
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggagtacagcgatgatcttccagaaacacctgatctgcctctggagattatagtttac
atcctgagttttcttcctgcctcagacagaaaggaagcctccctggtctgtcgcagctgg
tacaatgccagccaggacctgcgctttcagaggaacgtcaccttcagcttcccggcttca
gctgcttccctggcactggtcagaggtctggccaagaagccccgctgcagcctgaaaatc
agccaactcgatggcttcagtatctccagatccctccttacagaggttggtttgtgtctg
ggctccaaagtggacagtttggccctgcccggcagcagcctaacagaggcctccctgctg
gacctcctgccccgcctgacctcccttaggcggctcgacgtcagaggcctggacagcctc
ttcatgtctggggccttcctctccagagaggagcacagacggcaggtccgatctgcattg
agcggtctggaggagcttgacctgtcggacctgcgctacctctctgacctcaccttcacc
cggctcaccggctgcaccccacgcctccgccggctctcgctggctggctgccacatcgcc
ttcgagtttgacccgtaccgagggagcccggtgggagctgtggaggactcctccgctctg
ctgtcgctcaggaacctgaggaggttgttaacggagcagagctccaccctcaaagctctg
gatcttagcagaacctccatcacccctgaatcactgcggatcattgctcaggttcaggat
ttggtcctagaggagctgcatcttcagggctgcagagagctgactgactactccgtggag
gttctgattaagcaccagcccaaactcctgaaactggacatcagcggctgcacaggactg
accagtaggtcggtggaggctgcagctcgtggcctggagtctctgacgcatctctccttg
tctggagactggaggatcactgaaaaagggctggctgagctgctgtccgtctcttccctg
ctgtctctggacctgtccgagtgtcttcacatcagtggagtagagctggtaaagggactg
aagggctctgacactgccaaagcaaagctggaggcgctcagcctgaggagcagcacgtac
ctgagggatcccgccgttttttccctcgctcagctccttggggattctctgcgtgagttg
gatctaacgtcgtgtattaacgtgaccgacgtgtctgtatacgccatcagcgcctacctg
cagaagctggaagtgctgcagctcggctggtgcaaggaagtcacagattggggtttgtta
gggatggggcagagaagtgagagtgagccagatgaggagatgggggacaaaggtccaagg
ttcacccggacctttggcaacatgggcttcttcaagcctcctcggatgccttttgaagag
cgccccaagctgctgactcagaacgaccttcagcggttcagacaacaggccggagcgtcg
ctgctggctctgagacggctgcgggagctggacctgtcagcctgcgccaaactgaccgac
accagcgtcacacaggtgatccacttcccagacctgcagcgtttgtctctctctatgctg
ccagaactcacagacgccagcttagcgtcagtcggccggcgctgccgcagcctcaccagc
ctgtcactcagtcactgtccaggcatcactgaccgtggggttgcccaggcggcgccgtac
ctccagcgcctgcagcatctctacctctcctgctgtaataacatcactgacaggacgttg
taccttctgatgcagcactgcagacgtctgaaaaccgttgacatctcaaggtgcaaaaat
atctccatgacaacggtggacctcctccaatcacagctgccgtttttggaaaatgtccag
cacaagctcataggcgtggctgatctcccactgactgactgcttttaa
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