Cyprinodon tularosa (White Sands pupfish): 119789342
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Entry
119789342 CDS
T07496
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K27409
spectrin beta, erythrocytic
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ctul04812
]
119789342
Cytoskeleton proteins [BR:
ctul04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
119789342
Intermediate filaments
Intermediate filament-binding proteins
119789342
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
SCAR_helical
DYH2-5-8_CC
Ribonuc_L-PSP
DUF8074
Motif
Other DBs
NCBI-GeneID:
119789342
NCBI-ProteinID:
XP_038150123
LinkDB
All DBs
Position
Unknown
AA seq
1380 aa
AA seq
DB search
MQKGSGKEDREPEERERRGVPSCSAGSSRGFLAVCNSSVGGQDEQPVPAAHCPHKPTPAQ
RGQDQPQVQQQGCWSRSEQQGSRKPSLHPSRERGPSSGGSEQQPEQEHPPGPSCPQSREQ
EGNKQAAARSMKRARWLSYSTSNICFNSILDGRFRQLQDEREAVQKKTFTKWVNSILSRV
GCRISDLYLDLRDGRMLIKLLEVLSGERLPKPTRGRMRIHCLENVDKALQFLKEQRVHLE
NMGSHDIVDGNHRLILGLIWTIILRFQIQDIIVETGQADQKETHSAKDALLLWCQMKTAG
YPNINITNFTTSWKDGMAFNALIHKHRPDLVDYTKLKKSNPTHNLQNAFNVAEQKLGVTK
LLDPEDVFTENPDEKSIITYVVAFYHYFSKMKQLAVEGKRVGKVLDQAIETEKMIDKYET
LASDLLTWIEQTIIVLNNRKLANSLTGVQQQLQAFNTYRTVEKPPKFQEKGNLEVLLFTI
QSRMRANNQRVYTPKEGALVSDINRAWERLERAEHERERVLRDELIRQEKLEQMARRFDR
KAAMRETWLLENQRLVAQDNFGYDLPAVEAAKKKHDAIETDIAAYEERVQALVNISLELE
SERYHDSKRIDVRKDNILRLWDYLQELLKARKGRLDMNLTLQRIFQEMLYIISWMDEMKA
RLLSPDFGKHLLEVEDLLQKHALLENDIALQAERVQSASAAALKFANGDSYKPCDPQVIR
DRVQHLDLCYQDLCALAAQRRARLEQSRRFWNFLWEVAELESWIREKEQLFSSLDYGKDL
TSVLVLQSKHSAFEDELGARCTNLEQILAEGDKMIQAKHFGSPKIQECMDDIRRQWQQLE
DLATFRKQNLQDTQTFFQFQGDADELKAWLLDAKRQTSSDDVGHDEYTTQRLLKNHNSLR
NEAIKNGATIEMLSKQANALPEELQNTPDIQRRLKDVKDLYMELLTLADLRQKKLDDTMA
LYTIFSETDACELWMSMKETWLVGLEVPENLEDLEVVQNRLSALAQEMANVQSRVDDVNK
AAKQLEDSRHPRTKEIKECQTRLNKRWEAFKAMVEDKKMKVDSAVSLHNYGLECDETGTW
IKEKTRVIESTQDLGNDLAAVITIQRKLFGMERDLAAIEAKLTFLKEEAEQLAQDHPENA
EDILARRRELDTAWDKLRKTLKDREDSLGEVSKLQTFLQDMDDFQSWLFKTQKAVASEEM
PTSLQEAEELLGLHNAVREDINNHEEDYHRVRDTGARVIQGQEDDPQYQQLDQRLKGLDR
GWYELQKIWDSRKHFLDQGLGFQQFLRDCKAVEAILNNQEYTLAHIDKPDTLAGAEKALK
KHENFVSMMEANEDKIDGVMQGGQRVVDSNNLYSGKVQEKMDSVQDRWCIVLVYMSLPIC
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagggatctggaaaagaggacagagagccagaagaaagagagaggagaggtgtg
ccaagctgctcggccggctccagtcgaggttttcttgctgtttgtaatagttcggtgggg
ggtcaagatgagcagcccgtgcctgctgcgcactgcccccataagccaaccccggctcag
agaggtcaagatcagcctcaagtccagcagcagggatgctggagccgttcggagcagcaa
ggaagccggaagccgtcccttcaccccagcagagaaagaggcccaagttcgggtgggagt
gagcagcagccggagcaggagcacccccccggtccatcgtgccctcagagccgagagcag
gaaggcaacaagcaagctgcagccaggagcatgaagcgggcacgctggcttagttatagc
acctccaacatctgcttcaactccatcttggatggacgcttcaggcagctgcaagatgag
cgtgaggccgttcaaaagaagacctttactaaatgggtcaactccatcctttcccgagtt
ggctgtcgcatctctgacctctacctggacctgcgcgacggacgcatgctaattaaactg
ctggaggttctgtctggagaacgtctgccaaagccaactagaggccggatgcgtatccac
tgtctggaaaatgtggacaaggccttgcagtttctcaaagagcagagagttcacctggag
aacatggggtcccatgacattgtcgatggcaaccaccgcctcatcctcgggctcatctgg
accatcatcctgcgtttccagatccaggacatcattgtggaaacaggccaggcagaccag
aaggagacacactctgctaaagatgctcttcttctatggtgtcagatgaaaactgcagga
tacccaaacatcaacatcacaaacttcaccaccagctggaaggacggaatggccttcaac
gccctcatacacaaacaccggccagatctggtggactataccaaactgaagaagtccaat
ccaacccacaacctgcagaatgcttttaatgtagcggaacaaaagcttggagtgaccaaa
ctgttagacccagaagatgttttcacagagaacccagatgaaaaatccatcatcacctat
gtggtggcattttaccactacttctcaaagatgaagcagctcgctgttgagggaaagcga
gttggaaaggttctggatcaagctatagagacggagaagatgatcgataagtatgagacg
ctggcttcagacttgctgacgtggattgagcagaccatcatcgtgctgaacaacagaaag
cttgccaactctcttactggagtccagcagcagcttcaggccttcaacacatatcggact
gtagagaagccgcccaagtttcaagagaaaggaaatctagaggtgcttctgttcaccatt
cagagtcgcatgagggccaataaccaaagggtctacacgcccaaagagggagccttggtt
tctgacatcaacagggcctgggagcgtctggaaagggcggaacacgagcgggaacgcgtc
ctgagggatgagctgatccggcaggagaagctggaacagatggcgcgaagattcgacagg
aaggcagccatgagggagacgtggctccttgagaaccagagactggtggctcaggataac
tttggttatgacctgccggctgtagaagccgctaagaagaagcatgatgccatcgagacg
gacatcgccgcatacgaggagcgtgttcaggcgctggtgaacatctctttggagctggag
tctgagcgttaccacgactccaaacggattgacgtgagaaaagacaacatcctgaggctg
tgggactacttgcaggagcttctcaaggctcgaaaaggacgcttggatatgaaccttacc
ctgcagaggatcttccaggagatgctctacatcatcagctggatggatgaaatgaaggct
cgactgctgtctcctgactttgggaaacacttgttagaggtggaggacttactccaaaag
catgcactgctagagaacgacatcgccttgcaggcagagagggtacagagtgccagtgct
gctgctctgaagtttgcaaatggagatagttataagccatgtgatccccaagtgatccgt
gacagggtgcagcacctggacctctgctatcaggacctctgtgccctggctgcacagagg
agggctcggttggagcagtctcgccgcttctggaacttcctgtgggaggtggctgagcta
gagagctggattagagagaaggagcagctgttctcctccctggattatggaaaagacctt
accagcgtgctggtgctccagagcaagcacagcgccttcgaggatgagcttggagctcgc
tgcaccaatctggaacagatcttggctgaaggggataagatgatccaagccaagcacttt
ggttctccaaagattcaagagtgcatggatgacatcaggaggcagtggcagcagctggag
gacttggccacatttcggaagcagaaccttcaggacacacagaccttcttccagtttcag
ggtgatgctgatgaactcaaggcctggttgcttgatgccaagaggcaaacgagcagtgat
gatgtaggccacgatgagtacacgactcaacggctactgaaaaaccacaacagcttaaga
aatgaagccattaagaatggagctaccatcgaaatgctgtccaagcaagccaatgcactg
ccagaggagctacaaaacacccctgacattcagaggcgtctcaaagacgtcaaggacctt
tacatggagctcctgactctggctgacctgagacagaagaagctggatgacactatggct
ttgtacaccatcttcagtgagacagacgcttgtgagctctggatgagcatgaaggagaca
tggctggtgggcttagaggtgcctgagaacctggaggatttagaagtggtacaaaacagg
ttgagcgctctcgctcaggaaatggcgaacgttcagtcaagagtagatgacgtcaataaa
gctgcaaaacagcttgaggacagcagacacccccgcactaaagagatcaaggaatgccag
acacgactaaataaaagatgggaggctttcaaggccatggtagaggacaagaaaatgaaa
gtggattctgctgtcagtctacataactatggcttggagtgtgatgagacaggaacctgg
atcaaagaaaagacacgagtgatcgagtccacacaggatctgggcaatgacctggcagct
gtcattaccatccaaaggaaacttttcggcatggagagagatttagctgccattgaggct
aagctcaccttccttaaagaagaggcggaacagctggcccaggatcacccggagaatgca
gaggatatcttagcccgcaggagagagctggacacggcctgggataagcttagaaaaacc
cttaaagacagggaagactctctcggcgaggtcagtaagttacagaccttcctccaagac
atggatgacttccagtcttggcttttcaagactcagaaagctgtggcatctgaggagatg
cccacctcgctgcaggaggccgaagagctgctcggccttcacaacgctgtgcgagaagac
ataaacaaccatgaagaggactatcaccgggtaagggacactggagctcgggtcatccag
ggccaggaagatgatcctcagtaccagcagctggaccagagactgaagggccttgaccgg
ggctggtatgaacttcagaagatctgggacagtcgcaaacatttcctggaccagggtctg
ggcttccagcagttcttgagggactgtaaagctgtagaagccatcctcaataaccaggag
tatactctggctcacatagacaagcctgacacattggcaggggcagaaaaagcattgaag
aagcatgagaactttgtcagcatgatggaagccaacgaagataagattgatggtgtcatg
cagggcggacagcgagtggtggacagcaacaacctgtattctgggaaagttcaggagaaa
atggactctgtgcaagacaggtggtgtattgttttggtttacatgagtttacctatatgt
taa
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integrated database retrieval system
