Cyprinodon tularosa (White Sands pupfish): 119789433
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Entry
119789433 CDS
T07496
Symbol
taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctul03021
]
119789433 (taf1b)
Transcription machinery [BR:
ctul03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
119789433 (taf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
DUF5816
Motif
Other DBs
NCBI-GeneID:
119789433
NCBI-ProteinID:
XP_038150240
LinkDB
All DBs
Position
Unknown
AA seq
596 aa
AA seq
DB search
MDEEDTAEYREPCAQCAAVDWGISDEGRFYCRSCHNVIERTKEVVDTSFVGDFNRISWIS
SKSRAKKAERCRVLMVCEVFQLILKKQAEALLRLGVSPHFKDEVLCQMWRLYLQKSQQAY
TDNPVNSFRFRREGQDSDSDSASDFPLSGSSLDSRSGLSDSADSADSNTESTSTWMGPVS
KSPSSTASSNPIRRLLHMRKTLALIHLALVWSREALTLSDLLRLVKDGHVPYVTAYEEIP
DEMKLCGSEALLFNVEIIPSYRSVHKEAQSLILFLQLPAFPPIVPQTLLHPARLCLRYLI
DANLPDELHKWVCILMDRANMLDEKCHTVQVSQRLVLPQYELQAAALIIVTMKVFFGLDD
HTEWDLSNEVGSHGDSGNLFSFRKWYKLVQAALVQAQQRRSQDIARKQWKGKKLFYINKK
DRVYVTKRRRISENIQMCLKKLASGPPAVQDSGPSSFQFCWGDEDGSDGPSLHRMKLDGV
VSHQKGSTAPCNQKYWHLPLHPCHPWACSSHYTKLDPMLPRSFVWLLELFSFMLDVESWC
LLHAVLRVERRVFGIKTAQEIRGATRTKTGNRTRVRTRTERRTRSQGGDPGRKSKS
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaggatacagccgaatacagggagccctgcgctcagtgtgctgctgtggac
tggggcatctcagatgagggacgcttctactgcagatcctgtcacaacgttatcgagaga
accaaagaggttgtggacacttccttcgttggtgactttaacagaatctcctggatctcc
agtaaatccagagctaagaaggcggagcgctgcagggtgttgatggtgtgtgaagttttc
cagttgatcctgaagaagcaggccgaggctctgctcagactgggcgtcagtccgcacttc
aaggacgaagttctgtgtcagatgtggaggctttacctgcagaagagccagcaggcgtac
acagacaacccggttaacagtttcaggttcagaagggaagggcaggactcggactcggac
agtgcttcagatttcccgctgtcggggagttccttggacagcaggtccggtctgtctgat
tcagctgattcagctgactctaatacagagagtaccagcacttggatgggaccagtgagc
aaaagtccgtcctcgaccgcgtcatcgaaccccatccgcagactgctgcacatgaggaag
actctggctctgattcacctggctctggtttggagccgcgaagctctgacgctcagcgac
ctgctcaggctggtgaaagacggccacgtcccgtatgtgaccgcctacgaggaaattccc
gacgagatgaagctgtgtggatctgaggctcttcttttcaatgtcgagataatcccgtct
taccgctccgtccacaaagaggcccagagcctgattctcttcctgcagcttcctgctttc
cctccaatcgtcccacaaacgctgctccacccagcgcggctctgcctgcgttacctgatc
gacgccaacctgcccgacgagctgcacaagtgggtctgcatccttatggaccgcgcaaac
atgctcgatgagaaatgccacacggtgcaagtctcgcagcgtctcgtcctgccgcagtac
gagctgcaggccgccgccctcatcatcgtcaccatgaaggtgttcttcggcctggacgac
cacaccgagtgggatttgtctaatgaggttggttcccatggtgactcaggaaacctgttc
agcttcaggaagtggtacaaactggttcaggccgctttggtccaggctcagcagaggagg
agccaggacatcgccaggaaacagtggaaaggaaagaaactgttctacataaacaagaag
gacagagtttatgtcacaaagaggagaagaatctcagaaaacatccagatgtgtttgaag
aagctggcttcaggtccgccggccgtccaggactcggggccctccagcttccagttctgc
tggggcgacgaggacggatccgacggacccagtctgcaccgcatgaagctcgacggcgtc
gtctctcatcagaaaggctccacggctccatgcaaccaaaaatactggcatctccccctc
cacccctgccatccctgggcgtgcagcagtcattacaccaagctggatcccatgctgccg
cgctccttcgtttggctgctggagctcttctccttcatgctggacgtggagtcctggtgt
ctgctccacgccgtgctgcgagtggaaagacgggtttttggcataaaaacggcgcaggag
atcaggggagcgaccaggaccaagacggggaaccggaccagggtcaggacacggactgag
agacgaaccaggtctcagggtggtgatccaggaaggaaaagcaagagctga
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