Cyprinodon tularosa (White Sands pupfish): 119789714
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Entry
119789714 CDS
T07496
Symbol
rp1l1a
Name
(RefSeq) retinitis pigmentosa 1-like 1 protein
KO
K19538
retinitis pigmentosa 1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ctul03037
]
119789714 (rp1l1a)
04812 Cytoskeleton proteins [BR:
ctul04812
]
119789714 (rp1l1a)
Cilium and associated proteins [BR:
ctul03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
119789714 (rp1l1a)
Cytoskeleton proteins [BR:
ctul04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
119789714 (rp1l1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCX
DUF7406
Motif
Other DBs
NCBI-GeneID:
119789714
NCBI-ProteinID:
XP_038150694
LinkDB
All DBs
Position
Unknown
AA seq
2411 aa
AA seq
DB search
MQSVQTGLWDPHPPSKHASPLPAPPPSSSRHTHVTTATPAKRITFYKSGDSQFGGVRMAI
HKRSFKCFDALLDDLSQKVPLPFGVRTVTTPRGTHTIKHLEQLQDGGCYLCSDRRQAKPI
NMELAGKGQSVWHYQNRRPQRPENSSGTPPGHVHLPYRQRRILLVKNSEPGIRRSIVLSR
RSTRSLRAFLDEASEVMQFHVRKLYTAEGRRIDSVQSLVTCPGLLVCVGREAFSPMLINF
IKKTSEEKLPGLGSKSPGLGPRIPGNGARSPATQSIRSPPHGAQSRASEYDEGNESKKNV
NFGLETKKSIIHPRSDSSTRSARFSLSSEKSCGVFPQARPSITNDDIEKRVVVNKDGSLS
VEMRVRFRLQNEESVEWSTQIKKSPSLTNDCCPLGQAQQHYLQQGTSESCSDPDTTLYEG
VNYSRGPFALEENQCQYCYHRHEFDLWQNPTHKHSPAPPTHTSSHTMMRHTTSSSSSSSC
NSRRVIRCRAQVSGSPRGSGLGQRQLVQEEMCLTEQVEERVEVAQKGDTQVEVCKVSRCC
SRTEVVAIDSNLRPPSGRSMEGELMMVEDENRSLSAISSSSHILQSLKEDQDDDEDDLPP
SASQCSHRNELSPTPTPATHPGEAPTSNISACSVQSLKLKKKEENKGSRASSCMCGASIH
PSTGDQDQMDLLPSSMSQKSEEKGEVIIENEEIRRSLSSLSKNTGLSANSQKSWASNICP
NCGGCKRPNSSISAQTELSAKSNRSKDTNEIQSLKTRLEKEVENTTERSPSSLTSKSGAS
VKSHKSSCPSVTKERSPPGKTDIEEGDTDKRAHTSLSVKSNATGKAESILSDNSHMSKVS
AKSVSSCKQCGKTGTPESNEKDGLSSVRENEEGPGEEHRATSTMSAKSNLSAKSNKSHRF
TKSSRKSNRPRSENGKEAEESSTSQMSGRLSVTTESCKCNDNGKALSPILKVRNNEEDMN
NRPECMMADGLEEERRSSSAKSCKSATSTKSQIKIEEFERSLSATSERSHTSVKSSKSKR
SNHPKDSHNDSDLPLTETNKRQTENEPHEVLESAMSVKSKTSVKSGASTKNPPSTNRVTI
KTQGADEDENEANDGEPCSNISCIKTLQAGGNVNDGANTGTYSIDPHGQTLSPIRKPSSR
SHSASTRGSQSPVQNLFPNSGAGEERGHSSFSVHSKTSSKLSRSTCSCGGGSVLEKNNKA
EDIRNEGDRNSSSTRQRKESGCTDHTLSRNSSGSISLGLPEDQEMAGSDCGKSSVSCCSN
DKKSPSLLNPPVVDIPTIEAPRGGEEEGGEQPTERASSGRRVKSSRSRRSCCTCGVQSVD
QSKKKSTSSYPTKAKDADETESMTSAATTNVSPTDMPNSRSSSAVSGKKGKRKSPSGFSA
NNDNGNHNTSRPGSKTKGKEESTGSVHSQSHSGIRPNSTALVQSETIKPSEECTVPLDSE
KLGADKSSVIGSECGGSKVSSSGQKDTPVKSSTLCSLHSPRPTSKVKPGTDSTLSHSLSA
ADLFKESLAAAHQQSCQSKASKTSDKAHSEKSGRSQKNKNGIDQDDVIELTPECLPNASP
NEVVSDWLRSIPANSSMLTLGNELNEEETEQEEKEMEDVLTEEEKGAEEMDPEDVNVEEG
EKIEPQEEEKKVGAEGADPTLGNIAHISSHSRNWHSSVALMKVLLSSSLGRCWSMPEVSP
VYGRRLSTSARGLLDCLAELQLIEPMVSSHEQKDRKQQYDEIMGTLQSLWLTEPKKVEGK
VTKDSGTEQVSPPRSSSGVGMSSGSAGSGKSNGNQGEDVKETEILHEEEAVGKVVEEVDE
NAAGRDTELEEAHQTEPAEEPMKSEEQSLHPVSSKVTDNPSSSEKSSANEGSKSPTDNER
DTQEDSGSGTPPNAPRPPLSKRSSQDPDPVWVLNLLKKLEKQFMSHYIEAMAEFKVRWDL
DDSLILDTMISELREEVSRRIQNSIEREMKKIQGRAGRGGRSPRPPQLANMSRDSTMTEK
RRRMLKVMKNQSVKTAESLTDEETTADFSDQRSDDEYCPCDACVRKKLAFRPFKKNPLAA
EAPVMMEFDLLKILQLKKCPVPPPAVPSVAREERPNADDDGRNLGIVEEEEEEETKEDIK
ADVVLEETIPEEEEEEEEEKDEEIGIVEQEKENGTEDDELVVRERTEEVTDQGETSENEE
EEEGGCTCQTESNKEEEGDADETSDCTDDEGEAGEDENGRHESGTEDDEEESDKETVKDA
TTCEEDKESEEDASAKIPENTSVEELREENISTSVEEEDNGSGGEESQEEETQGGSEEQD
EEASEEERASQKSQDAIPPAGVTDGEEADAEDSDNSKRQSDTSAEESAPEETGGTGEEET
KDSDGEDSEEDAVEEFRPEQEGREEKEATKSKKEDGALLHQFTRTSVESQSGSMEEVGMD
LPSNSAVKRPK
NT seq
7236 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcggttcagacagggttgtgggacccccaccccccgtctaaacatgcttcgccg
ctacctgcgcccccgccttccagttcacgccacacccatgtgaccacagccactccagcc
aagcggattactttttataagagcggcgacagccagtttgggggcgtccggatggctatc
cacaaacgtagctttaaatgctttgatgccctgctggacgacctttcacaaaaggtgccc
cttccatttggagtgcggactgtgaccaccccccgaggtactcacaccatcaaacacctg
gagcagcttcaagatggcggctgctacttgtgctctgaccgacgccaggctaagcccatt
aacatggaattggccggcaaaggccaaagcgtttggcactatcagaaccggagacctcaa
cgccctgaaaactcctctggaactcctcctggccatgtgcatttgccttacaggcagagg
cggattttgctggtgaagaacagtgaaccagggataagaaggagcatcgtgttgagcagg
aggtcaaccagaagcctgagagctttcctggatgaagcgtctgaggttatgcagtttcat
gttcgcaagctctacactgcagaaggacgcaggattgacagtgtgcaaagcttggtgact
tgtcctggcttactggtgtgtgttggacgggaggctttcagccctatgctcataaacttc
ataaaaaagacttcagaggaaaagctgcctggtttggggagtaagtctcctggtctgggt
ccaaggattcctggtaatggcgcgagatctcctgcaacccaaagcataaggtccccacct
catggagctcagtccagagccagtgaatatgatgaggggaatgaaagcaagaaaaatgtt
aactttggtctggagaccaagaagagcatcatccaccctcgatctgattcctcaactcgc
tctgctcgtttctctttgtcatctgaaaagtcttgtggtgttttcccccaagcaagacca
tcaataaccaacgatgacattgaaaagcgggtcgtcgtcaataaagacggcagtctatca
gtagagatgagggtacgttttcgcctccagaatgaagagagcgttgagtggtccactcaa
ataaaaaaatctccttctcttaccaatgattgttgccctctgggtcaagcccagcaacat
tacctgcagcaaggtacctcagaaagctgttctgaccccgatacaacactctatgagggc
gttaattattccagaggaccatttgcattggaggagaaccaatgccagtattgctaccac
agacacgaatttgatttgtggcaaaaccccacacacaaacattcccctgcaccccctacg
cacacatcaagtcatacaatgatgagacatacaacctcttcaagctcttcttcttcatgc
aattccagaagagtgattcggtgccgtgcacaggtctctgggtctcctcggggctctggc
ttagggcagaggcagttagtccaggaagagatgtgtctgacagagcaggtggaggaacga
gtagaggtggcacagaaaggggacactcaggtagaggtctgcaaagttagccgatgctgc
agccgaacagaggtggtcgctatagatagcaacctccgaccacccagcgggaggtcaatg
gagggggagttaatgatggtcgaagatgaaaaccgatcactttctgccataagcagctcc
tcacacattctacagtctctgaaagaggaccaggatgatgatgaggatgatctgccacca
agtgcttcccagtgctcccatagaaatgaactatcccccactcctacgccagcaactcat
cctggtgaagcgccaacaagcaacatctcagcctgttcagtgcagtcactcaaactcaag
aagaaggaagagaacaagggaagcagggcttcatcctgtatgtgtggagcatccatccac
ccctcaacaggtgaccaagatcagatggatctactgcccagttccatgtcccaaaaatca
gaggaaaaaggagaagtcataattgaaaatgaagaaatccgcaggagtcttagtagttta
tccaaaaatactggactttcagcaaactcacagaaatcatgggcatccaatatttgccca
aactgtggaggttgcaaacgtccaaacagctctatatcagctcagactgagttgtctgct
aagtctaacaggtccaaggacacaaatgaaattcaatcactaaaaacaagattggaaaaa
gaggtagagaacaccacagagagatcacccagctcattgacaagcaaatctggtgcttca
gtcaagtcccacaaatctagctgtccatcagttactaaagagaggtccccaccaggtaaa
acagatatagaagaaggtgacacagataaaagagctcacactagcctttctgttaagtca
aatgccactgggaaggctgaaagtatcctgtcggataactcacatatgtcaaaggtttca
gcaaaatctgtctcatcgtgcaaacaatgtggaaaaacaggaactccagaaagcaatgag
aaagatggactaagcagcgtaagagaaaatgaggaaggaccaggagaggagcacagagcg
acaagtacaatgtcagcaaagtcaaatctgtctgctaagtcgaacaaatcccataggttt
actaaatcttctagaaaatcaaatcgtcctaggtcagaaaatggcaaggaggctgaagaa
agtagtacaagtcaaatgtctggaagattatctgttactacagaatcctgcaagtgtaat
gataatggaaaggcactgtctccaatcttgaaggtgagaaacaatgaagaagatatgaat
aataggccagaatgtatgatggcagacggtttagaagaggaaaggaggtcaagcagtgcc
aagtcatgtaaatctgctacttccacaaaatctcaaattaaaatcgaagagtttgaaaga
tccctgagtgctacctcagaaagatctcacacctctgtcaagtcctccaagtcaaagagg
tcaaaccacccaaaagactctcataatgactccgatcttcctttgactgaaacaaacaag
aggcaaactgaaaatgaacctcatgaggtcctggagagtgccatgtctgtaaaatcaaaa
acatcagtcaagtctggtgcttctaccaagaatcccccatctacaaatcgtgttactatc
aaaacacaaggagcggatgaggatgaaaatgaggcaaatgatggagaaccttgctcaaat
atttcttgtatcaaaacactacaggctggtgggaatgtgaatgatggtgcaaacacagga
acatattctatagatcctcatggccaaacactctcgccaataagaaaaccttcatcccgc
tcacattctgcctccaccagaggttctcagtcccctgtgcaaaatttgtttcctaactct
ggtgctggtgaggaaagagggcacagttccttctctgtccactctaaaacctctagtaaa
ttaagcagatccacttgcagctgtggaggaggctctgtacttgaaaagaacaataaggca
gaagatataagaaatgagggagatcggaatagctcatcaacaagacaaaggaaagaatca
ggatgcacggatcatactttaagtcgtaactcatctggatcaatctctttggggcttcca
gaggatcaggaaatggctggatcggactgtggcaaatctagtgtgtcttgttgcagcaat
gacaaaaaaagtccttcccttctcaatcctcctgttgttgatatcccaacaattgaagct
ccccgaggaggtgaagaagagggtggagaacaacccacagagagagcatccagtggaagg
agagttaaaagcagcagatctcgtagatcgtgttgcacctgtggtgtacagtcggtagat
caatctaagaaaaagagcaccagttcttatcccacaaaagctaaagatgctgatgaaaca
gaaagtatgacgtctgctgcaacaacaaatgttagcccaacagatatgccaaacagcaga
agctcatcagcagtttcaggaaagaaaggtaaaagaaaatcaccttctggtttttctgca
aacaatgataatggaaaccacaataccagtagaccaggaagtaagaccaaaggtaaagag
gaaagcacaggaagtgtccactcccaaagtcacagtggtattcggcctaactcaacagct
ttggtgcagtcagagacaataaaaccttcagaggagtgtacagtacctttggattcagag
aagctaggagctgacaagtcgagtgtaataggaagcgagtgtggaggtagcaaagtgtcc
agttctgggcaaaaagacacccctgtcaaatcatcaactctttgttccttacacagcccc
agaccaaccagtaaagtcaaaccaggtaccgacagtaccctgtctcactctttgtctgct
gctgacctatttaaagaaagcttggctgctgcacaccagcagagttgccaatcaaaagcc
agtaaaaccagtgacaaggcccacagcgagaaaagtggaaggtctcagaaaaataagaat
ggaattgatcaagatgatgtgattgaactgacacctgagtgtttgcccaatgcatctccc
aatgaggtggttagtgactggttgaggagcatccctgctaacagtagcatgcttacactt
ggtaacgagttaaatgaggaagaaacagagcaagaggaaaaggagatggaagatgtgctg
acagaggaagaaaaaggggcagaggagatggatcctgaggacgtgaatgtggaagaaggg
gagaagattgagccacaagaagaggaaaaaaaggttggagctgaaggagcagacccaact
ttaggcaatatagcgcatatatcttctcattccaggaactggcattcttctgtagcactg
atgaaggtcctcctaagctcctctctgggtcgatgctggagcatgcctgaggtgtctcca
gtttacggtcgcagactgagcacatcggccagggggcttttggattgtttggccgagctc
cagctcattgagcctatggtcagcagccatgaacagaaggatcggaagcagcagtatgat
gagattatgggcactcttcagtccctgtggctaactgaaccgaagaaggttgaaggcaag
gtgaccaaagacagtggcacagagcaggtgtctccaccaaggtcctcttctggtgtgggt
atgagcagcggttcagctggatcagggaagagcaatgggaaccaaggagaggatgtaaaa
gaaacagaaatcctgcatgaggaagaggcagtgggaaaggttgttgaagaggtggacgaa
aatgcagcaggcagagatacagaacttgaggaggcacaccaaacagagccagccgaggaa
ccgatgaagagtgaagagcaaagcctccatcctgttagctcgaaagtcacagataacccc
tcatcatcagaaaagagctctgccaatgaaggctccaaatcacccacagataacgaaaga
gatactcaagaagactctggctcaggcacccccccaaatgctccacggccacctttatcc
aaaagatcatcccaagatccagatccggtttgggtactaaacttgctgaagaagctggag
aaacagtttatgagccactacattgaggccatggcagagtttaaagtccgctgggacctt
gacgacagcctcatcctggacaccatgatctccgagctgagggaggaggtgagccggcgc
atccagaacagcatcgagcgggagatgaagaagatccaaggtcgagccggtagaggaggg
aggtcacctcggccaccacagttagcaaacatgtctcgggattccaccatgactgagaag
aggcgtcggatgctgaaggtgatgaagaaccaatcagtgaaaactgctgaatccctcact
gacgaggaaacgacagctgatttcagcgaccagcgaagtgacgacgagtactgcccttgc
gatgcttgtgtccgcaagaaactagcgtttcggcctttcaaaaagaatccgctggcagcc
gaagcccccgtgatgatggagtttgacctccttaagatacttcagctaaagaaatgccca
gtccctccccctgctgtgccatcagtggcaagggaggaaaggccgaatgcagatgacgat
ggcaggaatttaggtattgtggaagaagaagaggaagaagaaaccaaagaggacatcaaa
gccgatgttgttttagaggagacaattccagaagaggaagaggaggaagaagaggaaaaa
gatgaggaaataggaattgtagagcaggaaaaggaaaatggcactgaagatgacgagctg
gtagtaagagaaagaactgaggaggtcacagatcaaggtgagacgtctgaaaatgaagag
gaggaggaaggaggatgcacttgtcagactgaaagcaacaaagaagaagagggtgacgca
gatgaaacaagcgattgcacagatgacgaaggggaggcaggagaagacgagaatgggcga
catgagtcaggaacagaagacgacgaagaagagagcgataaggagacagtgaaggatgcc
acaacatgcgaggaggataaagaatcagaagaggacgcatctgcaaaaattccagaaaat
acgtcggtggaggagctgagggaggaaaacatcagcacatcagtggaggaggaagataac
ggatcaggaggggaggagtcacaggaagaggaaacgcagggaggcagtgaggagcaggat
gaagaggcctctgaggaggagagagcttcacaaaagagccaagatgcgattccccctgct
ggtgtgacggatggggaagaagcggatgccgaggattcggacaacagcaaacgtcagagc
gacaccagcgctgaagaatctgcaccggaggaaactggtggcactggtgaagaagagacg
aaagacagcgatggagaagacagtgaggaagatgctgtggaggagtttaggcctgagcag
gagggtagagaggagaaggaggctactaagagcaaaaaagaagacggggctcttctccac
cagttcaccaggacctcggtggagtcccagtcaggctcgatggaggaagtgggcatggat
ttaccttcaaactctgctgtcaaacgaccaaaatga
DBGET
integrated database retrieval system
