Cyprinodon tularosa (White Sands pupfish): 119789837
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Entry
119789837 CDS
T07496
Symbol
rad23b
Name
(RefSeq) UV excision repair protein RAD23 homolog B
KO
K10839
UV excision repair protein RAD23
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03420
Nucleotide excision repair
ctul04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119789837 (rad23b)
09124 Replication and repair
03420 Nucleotide excision repair
119789837 (rad23b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ctul03051
]
119789837 (rad23b)
03400 DNA repair and recombination proteins [BR:
ctul03400
]
119789837 (rad23b)
Proteasome [BR:
ctul03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
119789837 (rad23b)
DNA repair and recombination proteins [BR:
ctul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
119789837 (rad23b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Crinkler
Rad60-SLD_2
Dsc3_N
Metal_resist
Ubiquitin_5
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
119789837
NCBI-ProteinID:
XP_038150901
LinkDB
All DBs
Position
Unknown
AA seq
383 aa
AA seq
DB search
MLITLKTLQQQTFKIDIDEEETVKTLKERIEQEKGKDNFSVAGQKLIYAGKILSDDTALK
EYNIDEKNFVVVMVTKPKTAPTTTPTSSTTSAPSTTAPAASSSSDKPAEPVSSENKPEAK
AEEKPAPTTEPSSTTSGTRESSETSSSNLINEAVSTLVTGSSYDAMVNEMMLLGYGREEV
VAALRVSFNNPDRAMEYLLSGMPTRDQGPAAGPDTVAPPSSGAPAAPSGGVSAPANTGSS
PSPAAGANPLSFLRSQPQFQVMRQLIQQNPALLPTLLQEIGRENPELLQEISSHQEQFIQ
MLNEPNPDPVPAAGGGGGAGGMGGGTPGGGQTSYIQVTPQEKEAIERLKALGFPEGLVIQ
AYFACDKNENLAANFLLSQNLDD
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgctgataactttgaagactttacagcaacagacctttaaaattgacatcgatgaggag
gagacggtgaaaacgttaaaagagaggattgaacaggagaaggggaaagacaacttttct
gttgcaggacagaaactgatctatgctggtaaaatcttaagcgatgacacggctcttaaa
gagtacaacattgatgagaagaactttgtggtggtcatggtgacaaagcccaaaactgcg
ccgaccaccacgccaacctcatcgactacttctgctcccagcaccacagctcctgcagct
tcgtccagttcagacaaaccggcagagccggtgtcctctgaaaacaagcctgaggccaaa
gcagaggagaaaccagctccgacaactgagccatcctccacaaccagtggcactagagag
agctctgagacttcaagctcaaacttaatcaatgaagccgtttcaacactcgtgacgggt
tcgtcgtatgatgccatggtgaacgagatgatgctgctgggttatgggagggaagaagtg
gtggccgctctgagagtgagcttcaacaacccagacagagctatggaatacctgctctcg
ggaatgccaaccagagatcaaggtccagctgcaggccctgacaccgtggcgcctccatca
agtggagctccagccgctccctctggaggtgttagcgctcctgccaacactggatcgtca
ccaagtcctgcagcaggggccaatcccttgagcttcctgagaagtcagccacagttccag
gtgatgcgacagctgattcagcagaatcctgctcttcttccaacgttgctgcaggagatc
ggcagggagaacccagagctgctgcaggagatcagcagccaccaagaacagtttattcag
atgctgaatgagcccaatccagacccagtgccagcagcaggtggaggtggaggagctgga
ggaatgggaggtggtacacctggtgggggtcagacgagctacatccaggtcacaccacag
gagaaagaagctattgagaggctaaaagccttgggttttccagaaggacttgtcatccaa
gcctacttcgcctgcgataagaacgagaacttggctgccaacttccttttatcacagaac
ctagacgattga
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