Cyprinodon tularosa (White Sands pupfish): 119789936
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Entry
119789936 CDS
T07496
Symbol
cdh4
Name
(RefSeq) cadherin-4 isoform X1
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119789936 (cdh4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ctul04515
]
119789936 (cdh4)
Cell adhesion molecules [BR:
ctul04515
]
Cadherins
Major cadherins
119789936 (cdh4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_4
Stevor
DUF5527
Motif
Other DBs
NCBI-GeneID:
119789936
NCBI-ProteinID:
XP_038151070
LinkDB
All DBs
Position
Unknown
AA seq
928 aa
AA seq
DB search
MIAGCVLLACTLLVGASSGSRAGQPLKPSCRPGFSQNFYTVIVPRDVLHGQSILKDTTLS
SERVKFEDCQRSREVGFVSSDPNFSVRPDGSVYTEQEVANLSEPVQFMVTARGLHDPHIW
ETTVKLALTGHLHPLPLSKVGFEEMLSRVWESQPRVIKFSRRHLRGSSANGLRRQKRDWV
IPPINVPENSRGPFPHMLVRIRSDQDKDVGIRYSITGAGADQPPSGIYNIDPISGNMFVT
QPLDREERASFHLRAHAVDMNGNQVENPIDLYIYVIDMNDNRPEFQNQVYNGSVAEGSKP
GSSVMQVTARDSDDSTTANGMVRYRILSQTPQSPIPNMFTINSETGDIVTVAAGLDREKV
SQYTIIVQATDMEGNLNFGLSNTATALISITDINDNPPELTVRTFSGEVLENKVNVVVTN
LTVVDRDQPHSPNWNAVYRIVSGDPSGHFTIRTNPITNEGMLTVVKPVDFEMNRAFMLTV
VVSNQAHLASGIQSSLQSTAGVTISVQDVNEPPVFPINPKMIRFEEGVPAGTTLTVFSAQ
DPDHFIHQVVRYSKLSDPANWLKINRTNGQITTMSLLDRESIYVKNNMYEATFLAYDNGK
SGSPQASGTGTLQIYLIDVNDNAPVLIPKEAQICERARPNSRINITASDADAEPNVGPFV
FELPSFPPSIRRNWTISRLNGDYAQLRLRIPYLEAGVYGIPVIVSDSGNPPLSNRSLIRI
KVCPCDNNGDCSATGAVAAAGLGTGAIIAILICIIILLSMVLLFVVWMKRREKERQAKPL
LIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPESLDHIINKPTGVRRVDERPVIAES
QYPVRPTVPHPGDIGDFINDGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSTSS
EDQDYDYLNDWGPRFKKLADLYGGGEDD
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgatcgctggctgcgtcctgttggcgtgcaccttacttgttggcgcatcctcggggagt
agggcgggccagcccttgaaaccttcctgtagacccggcttctctcagaacttctacacg
gtgattgtccccagagatgtactgcacggacagagcatcctcaaagataccaccctgtcc
agcgagcgtgtgaagtttgaggattgccaacgcagcagagaggtgggctttgtcagcagc
gaccccaacttcagcgtgaggcctgatgggagcgtgtacacagagcaggaggtggcaaac
ctctcagaacctgtccagttcatggtgacggcgcgggggctacatgatcctcacatctgg
gagaccacagtgaagttggccctcaccggacatcttcatcctctaccactctcaaaggtc
ggctttgaagaaatgctgtcacgggtgtgggagtcccaacccagagttatcaagttttct
cgaagacatctgagaggttcctctgccaatggtttgaggcggcaaaagagagattgggtc
atcccacccatcaatgtgcctgaaaactcccgtggaccctttccacacatgcttgtcaga
atccgctcggatcaggataaggacgttggcattcgctacagcatcacaggcgccggcgca
gatcagcccccgagtggaatttacaacatagatcccatcagtggcaacatgttcgtcact
cagcccctggacagagaggagagagcatccttccatctgcgggctcatgcggtggacatg
aacgggaaccaggtggagaatccaatagatctgtacatttatgtgatcgacatgaatgac
aacagacccgagttccaaaaccaggtttataatggctcagtggctgaagggtccaaacca
ggctcctctgtgatgcaagtcacagccagggactcggatgactccaccacagctaacggc
atggtgcggtatcggatcctttcacagactcctcaaagtccaattcctaatatgttcacc
atcaacagcgagacgggagacattgttactgtggcagccggcctggacagggagaaagtg
tcccagtacaccattattgtccaagccacagatatggagggcaatctaaactttgggctc
tccaacacagctacagctctcatatctatcactgacatcaacgacaacccaccagaactg
acagtcaggacgttttccggggaggttcttgaaaacaaggtgaacgtggtcgtcaccaac
ttgacagtggttgaccgggatcagccgcacagccccaactggaacgcggtttatcgtatc
gtcagcggagacccctctggacactttaccattcgtaccaatcctatcaccaatgaagga
atgctaacagttgtcaagccggtggattttgaaatgaaccgtgccttcatgctgacagtg
gtggtgtccaaccaggcccacctggcaagcggcattcagtcctctcttcagtccacggca
ggagtcaccatctctgtccaggatgtgaacgagccgcctgtctttccaatcaaccccaaa
atgatccgttttgaggagggtgtgccggctggaaccactctcacagttttttctgcgcag
gatcctgaccacttcatccatcaggttgtcaggtactctaagctgtcagatccagctaac
tggttgaagatcaacaggaccaatggtcagattaccaccatgtccctgttagacagagag
tccatttatgtcaaaaacaacatgtatgaagctacattcttggcatacgacaatggtaag
tctggttcgcctcaggccagtgggactggtaccctccaaatttacctgattgatgtcaat
gacaatgcgcctgtgctaataccgaaggaggcccaaatttgcgagcgtgcccgtcccaac
tccagaatcaacatcacagcttcggatgctgatgccgagcctaatgtcgggccttttgtg
tttgagctgccttcgtttcctccaagcatccgtcgcaactggaccatttccagactgaat
ggtgactacgctcagctaaggctaaggatcccttacctggaggccggtgtgtatgggatc
ccagtcatagtgtctgactcggggaaccctcctctgtccaaccgctctctgatcaggatc
aaagtgtgtccctgtgacaacaatggggactgtagtgcaacaggagccgtggcagctgct
ggtctcggcactggagccatcattgctatcctcatctgcatcatcatactgttgagtatg
gttctgctgtttgtggtgtggatgaagcgcagagagaaggaacgacaagcaaagcccctg
ctgattgaccctgaagacgacgttagggacaatatcctgaagtacgatgaagagggagga
ggagaggaagaccaggactatgatctgagccagctgcagcagccagagtctctggaccac
atcataaacaaacctacaggggtgcgccgggtcgatgagaggcctgtgattgctgagtca
caatacccagtcagacccactgtaccccacccaggggacataggagacttcattaacgat
ggcctgagggcagctgacaacgatcccactgcccctccatatgactccctgctggtgttc
gactatgagggcagcggctctactgcaggttctgtcagctcgctcaactccaccagctca
gaggatcaggactacgactacctcaacgactggggtcctcgctttaagaagctggcagac
ctctacgggggaggagaggacgactga
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