Cyprinodon tularosa (White Sands pupfish): 119789941
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Entry
119789941 CDS
T07496
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119789941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctul03021
]
119789941
03036 Chromosome and associated proteins [BR:
ctul03036
]
119789941
Transcription machinery [BR:
ctul03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119789941
Coactivators
SAGA/TFTC/STAGA complex
119789941
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
119789941
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
DUF3730
Motif
Other DBs
NCBI-GeneID:
119789941
NCBI-ProteinID:
XP_038151096
LinkDB
All DBs
Position
Unknown
AA seq
780 aa
AA seq
DB search
MNSHNSGSVATGNSSSSTVISTAAVSAGAVLSKGLAATTVSLPPLSNSVIQTPLVNSDSV
PAMSQGPTVTLVRPPMQAVGSSATLNGSNAACPAVAANVTNQTGIGTQNPLPNTSTSSSA
GSHIIKAEPPTTIIQSAQQPAVSATPNSISTPGPPGMAAASMPGITPQTLAPRLPQTSPG
QPSVHNIQLPQGMVLVRSESGQLLMIPQQALAQMQAQAQGGMAPRTAMPANVSAGQASGP
TIISRQVTPSNIIRPASLPAITALHRPPILPSSVGAPVPGMAPRTLTPTAGTTVTSVTGS
KETMENVKKCKNFLSTLIKLASSGNQSTETAATVRQLVKDLLEAKLEAEEFTSRLYKELN
SSPQPYLVPFLKRSLPALRQLTPDSATFIQQSQLPQTASAAVSSSSATSTSVILGSPAPR
LSVPGSRPQLQPTLKQGQTTSLVLHPQQQKGILRPPVTLPTTPMMALRNQTPGRIVLGQQ
QVQLKELQPVPLRPEVALVPKHVSAVALTQAQKNKLKEAGGTFKDDDDINDVASMAGVNL
SEESANILASNSGLVGAVTHSCKDEAFLSCATLQRRILEIGMRYGVTELGAEVVNYISHA
AQQRLLNLLEKVSIVAQQRNVNFKEDERYEQSSDVRAQLKFLEQLDQLEKQRKEEQEREI
LLKAAKSRARQEDPEQLRLKLKAKEMQMQELAQMRQREANLTALAAIGPRKKRKNLDSPS
SSASAEGSGTGSSLTGAAGSSGSRPTRQRITRVNLRDLLFCMENERCTSHSHFLYKGFLK
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgaactctcacaattcaggaagcgttgccactggaaacagcagcagcagcactgtgata
tcaactgcagctgtcagcgcaggagcggtgttgtcaaaagggctggcggccaccactgtc
tcattgccccccctgtcaaacagcgtcatccagacgccactcgtgaattcagacagtgtt
cctgctatgagccaaggacccacggtgacacttgtcaggccacctatgcaagcagtcgga
tcgagcgcaactttaaacgggagcaatgctgcatgcccagctgtggctgctaatgtaaca
aatcagacaggtattggcactcaaaacccgctgccaaacacctctacgtccagcagtgct
ggttcacacatcattaaagcagagccaccaacaactataatccagtcggcacagcagcct
gctgtttcagccacccccaactccatcagtacccccggacctccaggcatggcagctgca
agtatgcccggaatcacaccccagacgctggctcccagactcccacagacctctccagga
cagcccagtgttcacaacatccagctaccccagggtatggtgctggtacgcagtgagagt
gggcaattattgatgattcctcagcaggctctggcccaaatgcaagcacaggcacaggga
ggcatggctcctcggacagctatgccagcaaatgtgtctgcaggccaggcttccggaccc
acaataatcagcagacaagtaactccgagcaacatcattcgaccagcatcacttcctgcg
attactgctcttcatagaccccccatcctgccaagctccgttggggccccagtaccagga
atggcccctagaacactcactcctactgctgggaccacagtgacctcagtaactgggagc
aaagagactatggagaatgtaaagaaatgcaagaactttctgtctacactgatcaagctg
gcatccagtgggaatcagtccacagagacggcagccactgtgagacagctggtcaaagac
ctgctggaagctaagcttgaagctgaagaattcaccagcagattgtacaaagagctgaat
tcgtcaccccaaccttaccttgtgccttttctgaagaggagcctcccagccttgaggcag
ctcaccccggattcagctactttcatccagcagagtcagcttccacaaacagcctcagct
gctgtttcgtcctcctcagccacctccacctcagtgattctgggaagtcctgctccccgt
ctctctgttccaggcagcaggccccaacttcagccgacacttaaacaaggacagacaacg
tcactggttctccatcctcagcagcaaaaagggattttgaggcctccggtgactttacca
accacccccatgatggctctaaggaatcagacccctggtcgcatcgtgttgggacagcag
caagttcagcttaaagagctgcaaccagttccactgagaccagaggtggctcttgttcct
aaacacgtgtctgctgttgctttgacacaggcacagaagaataagctaaaagaggcgggt
ggcactttcaaggatgatgacgacatcaacgacgtggcctccatggcgggagtaaaccta
tcagaggagagtgctaatatcctggcttctaactctggacttgttggtgctgtgacacat
tcctgtaaggatgaggcttttctctcctgtgccacactgcagaggaggatactagagata
ggtatgagatatggagtaacagagctgggagcagaggtggtaaattacatctcccacgct
gctcagcagcgactcctgaacttacttgaaaaggtctctatagtagcccagcagagaaac
gtcaacttcaaggaggacgagcgctatgagcagagcagtgatgttcgagcccagctgaag
ttcttggagcagctggaccaactggagaagcagagaaaggaggagcaggagagggagatc
ctgctgaaggcagctaagtctcgcgctcggcaagaggatccagagcagctgcgtctgaaa
ttgaaagcgaaagagatgcagatgcaggagctggctcagatgagacagagggaagccaac
ctcaccgccttggcagccatcgggcccaggaaaaagagaaagaatctggactctccatcc
tcatctgcttcagctgagggctccggaacaggctcttctctgactggtgccgccggttca
tcaggctccagacccacacggcagcgcatcacacgtgtcaatctcagggacctgctgttc
tgcatggagaatgagagatgtaccagtcactctcatttcctctacaagggctttctcaaa
tag
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integrated database retrieval system
