Cyprinodon tularosa (White Sands pupfish): 119789949
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Entry
119789949 CDS
T07496
Symbol
top3b
Name
(RefSeq) DNA topoisomerase 3-beta-1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03440
Homologous recombination
ctul03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119789949 (top3b)
03460 Fanconi anemia pathway
119789949 (top3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctul03032
]
119789949 (top3b)
03400 DNA repair and recombination proteins [BR:
ctul03400
]
119789949 (top3b)
Enzymes [BR:
ctul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
119789949 (top3b)
DNA replication proteins [BR:
ctul03032
]
Eukaryotic type
DNA Topoisomerases
119789949 (top3b)
DNA repair and recombination proteins [BR:
ctul03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
119789949 (top3b)
FA (Fanconi anemia) pathway
119789949 (top3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
119789949
NCBI-ProteinID:
XP_038151133
LinkDB
All DBs
Position
Unknown
AA seq
858 aa
AA seq
DB search
MKTVLMVAEKPSLAQSIAKILSKGSCSSRKGLNGACSVHEYSGSFQGQTVRFKMTSVCGH
VMSLDFTGKYNNWDKVDPAELFSKAPTEKKEANPKLNMVKFLQVEARGCDCVVLWLDCDK
EGENICFEVLDAIQPVMNKGDGREQSVFRAKFSSITDTDIWNAMNRLGEPNKNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETF
WVIQAKVFKGKDSPLTLDWSRVRVFDREVGQMFVSLAKTSKEAQVESVSKKEKAKQRPQA
LNTVEMLRVASSALGMGPQHTMQIAERLYTQGYISYPRTETTHYPENFDLKGTLKQQVNN
PAWSEEVKALLSSGINRPRKGSDAGDHPPITPMRCASEGELGSDGWRLYDYITRHFIATV
SQDCKYLQTTIDFRVGTEAFSCSGKTLISAGYTAVMPWQGIPLEEALPACEHGDTFTVEE
VKLVERQTSPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVENGRRLKPTNL
GIVLVHGYHKTDAELVLPTIRSAVEKQLNLIAQGKANYQQVLQHTLDIFKRKFHYFVDSI
TSMDELMEVSFSPIAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDETYSLPQNGAIKL
YKELRCPLDDFELVLWTSGARGKSYPLCPYCFSHPPFRDMKKGMGCNECTHPSCQHSLNS
LGIGQCVECDSGVLVLDPTSGPKWRMACNKCNVVVHFFEHAHKVQVAQESCDACDASLVA
VDFNKTRTPLPDGETQHTGCVFCDSVFQDLVELKHATMRHSMYRGGGSRRGGRGRGRGRR
GNPKKPKDKMAALAAYFV
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactgttctgatggtggcagagaaaccttctctggctcagtccatcgctaaaatc
ctctccaaaggaagctgctccagtcggaaaggcctgaacggagcgtgttcggtacatgag
tacagcggcagcttccagggccagacggtccgcttcaagatgacctcggtttgtggtcat
gtgatgagcctggattttactggaaaatacaacaactgggacaaggtggacccggcagaa
ctgttcagtaaagctcccacagagaagaaggaggccaaccctaagctgaacatggtgaag
ttcctgcaggttgaggcccgaggctgcgactgtgtggttttatggttggactgtgacaaa
gaaggcgaaaacatctgtttcgaggttctggatgccatccagcctgtcatgaataaaggc
gacggcagagagcagagcgttttccgggccaagttcagctccataaccgacaccgacatc
tggaacgccatgaaccgcctgggggaacccaacaagaacgaggcgctgtcggtggacgcc
cgccaggagctggacctgcggatcggctgtgccttcacacggttccagaccaaatatttc
cagggcaaatatgggaacttggactcgtctctaatctcgtttggaccgtgtcagacccca
acgctcggattctgtgtggagcgccatgataagatccagtcctttaaaccggaaacattc
tgggtcatccaggcaaaggtgttcaaaggaaaggattccccgctgaccctggactggagc
agggtgagggttttcgacagggaggtggggcagatgtttgtcagcctggccaagacctcc
aaggaggcccaggtggagtctgtgagcaaaaaggagaaggccaaacagaggcctcaggcc
ctgaatactgtggagatgctgagagtggccagctctgctttaggtatgggtccccagcac
accatgcagatcgcagagcgcctttacacccagggctacatcagctaccctcggactgag
accacccactaccccgagaactttgacctgaaggggaccctgaagcagcaggtcaacaat
ccagcgtggtcggaggaggtgaaagcgcttctgtcatccggtataaaccgtcccaggaag
ggcagcgacgcaggagaccatcctcccatcactcccatgcgttgtgcgtcagagggggag
ctgggcagcgacggttggcggctctacgactacatcacgcgacatttcatcgccaccgtc
agtcaggactgcaagtacctacaaaccaccattgacttccgggttggcacggaggccttc
tcctgcagcgggaaaactctcatatcggcaggttacacagcggtgatgccctggcagggg
atcccgctggaagaagctctgcctgcctgtgagcatggagacacttttacagtggaggag
gtgaagctggtggagcggcagacgagtcctcctgactacctgacagaggctgaactcatc
acgctcatggagaaacacggcatcggcactgatgccagcatccccgtccacatcaacaac
atctgccagaggaactacgtgacggtggagaacggccgcagactgaagcccaccaacctc
ggcatcgtcttggtgcacggctaccataagacagatgctgagctggtgctgccgaccatc
cggagcgccgtggagaagcagctgaacctcattgctcagggaaaggccaactaccagcag
gtgctgcagcacacgctggacatcttcaagaggaagttccactactttgtggactccatc
accagtatggatgaactgatggaggtctccttctcccccatcgccgccactggaaagccc
ctctcccgctgtgggaaatgccaccgcttcatgaagtacatccaggccaagccgagccga
ctccactgctcccactgcgatgagacctacagcctgccccagaacggagccatcaagctg
tacaaggagctccgctgtccgctggacgactttgagctggtgctgtggacgtctggcgcc
cgagggaagagctacccgctgtgtccctactgcttcagccacccccccttcagggacatg
aagaaaggtatgggatgcaatgaatgcacccatccctcctgccagcattccctcaactct
ctgggcatcggccagtgtgtggagtgcgacagcggggttctggtgctggatcccacctct
gggcccaaatggagaatggcctgcaacaagtgcaacgtggtggtgcacttctttgaacac
gcacacaaagtacaggtcgctcaggagagctgcgacgcttgcgatgcctccctcgtcgct
gtggacttcaacaagacccgcaccccacttcctgacggcgagactcaacacaccggctgc
gttttctgtgactccgtcttccaggacttggtggagctcaaacacgccaccatgaggcac
tccatgtatcgaggcgggggatccagacgcggaggccggggaagaggaaggggacgtcgt
ggcaaccctaagaaacccaaagataaaatggcagccctggcagcgtactttgtgtag
DBGET
integrated database retrieval system
