Cyprinodon tularosa (White Sands pupfish): 119790043
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Entry
119790043 CDS
T07496
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03030
DNA replication
ctul03410
Base excision repair
ctul03420
Nucleotide excision repair
ctul03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119790043 (rfc4)
03410 Base excision repair
119790043 (rfc4)
03420 Nucleotide excision repair
119790043 (rfc4)
03430 Mismatch repair
119790043 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctul03032
]
119790043 (rfc4)
03036 Chromosome and associated proteins [BR:
ctul03036
]
119790043 (rfc4)
03400 DNA repair and recombination proteins [BR:
ctul03400
]
119790043 (rfc4)
DNA replication proteins [BR:
ctul03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
119790043 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
119790043 (rfc4)
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
119790043 (rfc4)
DNA repair and recombination proteins [BR:
ctul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
119790043 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
119790043 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_assoc_2
AAA_30
AAA_22
AAA_11
AAA_16
DUF815
Mg_chelatase
Gp44_lid
AAA_19
RuvB_N
AAA_24
Cdc6_lid
SLFN-g3_helicase
AAA_14
AAA_28
ResIII
AAA_5
wHTH-PRTase_assc
AAA_7
AAA_3
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
119790043
NCBI-ProteinID:
XP_038151280
LinkDB
All DBs
Position
Unknown
AA seq
357 aa
AA seq
DB search
MQAFLKGANFPTSKPQKEKSTAGPSAEKKTKAIPWVEKYRPKSVDEVAFQDEVVAVLKKS
LKGADLPNLLFYGPPGTGKTSTILAAARELYGPELFRQRVLELNASDERGIQVIREKVKN
FAQLTVAGTRPDGKMCPPFKIIILDEADSMTAPAQAALRRTMEKESRTTRFCLICNYISR
IIEPLTSRCSKFRFKPLANQIQEERLLEICEKEKLKYSNESIAALVQLSQGDLRKAITIL
QSAARLNAHKEITEQAIVEIAGVVPSTMIDNLLQICFKGTFEKLEVAVRNLVNEGYAATQ
ILSQLHSCVLEKDIPDMQKSTIAEKMAVTGKCLADGADEYLQILSLCSVIMQQASQS
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcttttctcaaaggagcaaattttccgacaagcaaacctcagaaggagaagtca
acagctggaccgagtgcagagaaaaaaaccaaagccattccctgggtagaaaaatacaga
cccaaatctgtggatgaggtggccttccaggatgaagttgtagccgtgctgaagaagtca
ctcaaaggagcagatcttccaaatctgctcttctatggccctcctggaacaggaaagacc
tccactatcttagctgctgccagagagctttatggaccagagttgttccggcagagggtg
ctggagttgaacgcttcggatgaacgaggcattcaggtcatcagagagaaggtcaagaac
tttgctcagctgacggtggctgggactcgtccagatgggaagatgtgtcccccttttaag
ataatcatcctggatgaggctgactccatgacggctccagcacaagctgctctcagacga
acgatggagaaggaatctcgcaccacgcgcttctgtctcatctgtaactacatcagcagg
atcattgagcctctcacttccagatgttctaagtttcgtttcaaacctctggccaatcag
atccaagaagaacgtctgctagaaatatgcgaaaaagagaagctcaaatactctaacgag
agcattgcggcgctggtgcagctctctcagggggacctgagaaaagccatcacaatcctg
cagagtgcagcccgtctcaacgctcacaaggaaatcactgagcaagctatcgttgagata
gcaggggttgttccttccacgatgatcgataatttgctccaaatctgcttcaaagggaca
tttgagaagctagaagttgcagtaaggaacctggtgaatgaaggttacgcagcaacacag
atcctgagtcagcttcatagctgtgtcttggaaaaagacatccctgacatgcaaaagtca
accattgcagaaaagatggcggttacgggaaagtgccttgctgacggtgcagacgagtac
ctgcagatactaagtttgtgttcagtgatcatgcagcaggcttcccaaagttaa
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integrated database retrieval system
