Cyprinodon tularosa (White Sands pupfish): 119790130
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Entry
119790130 CDS
T07496
Symbol
usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119790130 (usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ctul03041
]
119790130 (usp39)
Spliceosome [BR:
ctul03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
119790130 (usp39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
119790130
NCBI-ProteinID:
XP_038151429
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All DBs
Position
Unknown
AA seq
498 aa
AA seq
DB search
MSLKREREDQVDDDDSEDEVSTKRGRGRVEEDRRSRHCPYLDTINRSLLDFDFEKLCSIS
LSHINVYACLVCGKYFQGRGQKSHAYTHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLE
DITYVLKPTFTKKHIAGLDKHGKLYRAYDGTTYLPGIVGLNNIKANDYANAVLQAFSNIP
PLRNYFLEEENYKGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCS
KKTFQITKQGDAVDFMTWFLNALHGALGGTKKKPSIITKVFQGSMRIFSKKLPHPDLPPE
EKEALLQTEEYQEQMSESSFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILGKFNGNTEK
EYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLSEYLTEEA
QATEKNTSYDLVANIVHDGKPTEGSYRIHVLHHGTGKWYEMQDLQVIDILPQMITLSEAY
IQIWKRQESSDTNNHKGV
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgaagagagagagagaggatcaggtggacgacgatgatagcgaagacgaggtt
tcaaccaaaagaggacgaggacgtgtagaagaagaccgtagaagccgccattgcccttat
ctggacaccataaacaggagtttgctggattttgactttgagaaactctgctccatctcc
ctctcacatataaacgtctatgcgtgccttgtatgtgggaaatactttcagggcagaggt
cagaagtcccatgcatatacccacagcgttcagttcagccatcatgtgttcctcaacctc
catacactgaagttttactgtctgccagataactatgagatcatcgactcctcgctagag
gacatcacatatgtgctaaagccaaccttcactaagaagcacattgcaggactggataag
catggtaaactgtacagagcctatgacggcacgacctacctgccaggcatcgtggggctc
aataacatcaaagctaacgactatgccaatgcagtgttacaggctttttctaatatccca
cctttgcgaaactacttcctggaggaggaaaactacaaaggaatccgcagaccaccaggg
gacatcatgttcctcctggttcagaggtttggggagctgatgcgcaaactttggaacccc
agaaacttcaaggcccacgtgtctccacatgagatgctgcaggccgtggtgctgtgcagc
aagaagacctttcaaattacgaagcagggtgatgctgtagactttatgacatggttcttg
aatgctctgcatggggctcttggaggcaccaagaaaaagccatcaatcatcacaaaggtt
tttcaaggctccatgagaatcttctctaagaaacttccacacccagatttgccacctgag
gaaaaggaggcgctacttcagacggaggagtaccaggagcagatgtccgagtcctccttc
ctgtttctgaccctggacctcccaacagctcctctgtacaaggatgaaaaggagcagctt
attatccctcaggtccctcttttcaacatcctgggcaaattcaatggcaatactgaaaag
gaatacaaaacctacaaagagaatttccttaaaaggttccagctgaccaagctgccacct
tatctcatcttttgcattaaaagattcaccaagaacaacttctttgtggagaaaaaccca
acaattgtcaacttcccaatcacaaacgtagacctttcagagtacctcacggaagaagct
caagctacagagaagaatacttcttatgaccttgttgccaacattgtgcatgatgggaaa
cccactgaaggatcctacaggatacatgtcctgcatcatggaacagggaagtggtatgaa
atgcaagatctgcaggtaatcgacattctccctcagatgatcactttgtcagaggcctac
atccagatttggaaaaggcaagagagcagtgacacaaacaaccacaagggggtgtga
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