Cyprinodon tularosa (White Sands pupfish): 119790170
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Entry
119790170 CDS
T07496
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
119790170 (usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ctul01002
]
119790170 (usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctul04131
]
119790170 (usp30)
04121 Ubiquitin system [BR:
ctul04121
]
119790170 (usp30)
Enzymes [BR:
ctul01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119790170 (usp30)
Peptidases and inhibitors [BR:
ctul01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119790170 (usp30)
Membrane trafficking [BR:
ctul04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
119790170 (usp30)
Ubiquitin system [BR:
ctul04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119790170 (usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Arabinose_trans
Motif
Other DBs
NCBI-GeneID:
119790170
NCBI-ProteinID:
XP_038151507
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MDTGMLWCRLENTDKLVGEFLGTGPTVRNKMIKNWGVVGGIAAAIAAGAYVLWGPITERK
KRKRGMVPGLLNLGNTCFLNSLLQGLAACPSFIRWLEKFSGLPSIQSCKDNQLSSTLLHL
LKALSSEEPGDEDVLDAGCLLDVLRLYRWQISSFEEQDAHELFHVLTSSLEEERNRQPKV
THLFDMQSLESLPDEDAKAFACISRAAPLHPIPGPWKFQHPFHGRLTSNMSCKRCEIQSP
VRYDSFESLSLSIPLPQWGRPLSLDQCLQHFISSETIKEVECENCTKIQQSTTRNGQIFE
SQRTTFVKQLKLGKLPQCLCIHLQRLTWSSEGTPIKRQEHVHFTEYLSMDRYKHNSTQRS
QRFTLAHKAKKTESLDTEESTERLRANGTDAEHHNNNKPFSNGTCSSVFLLSPGLNPQRG
FTYEFSSTEYLFKLTAVLVHHGDMHSGHFVTYRRSPAPPCSTSPFSSQWLWVSDDSVRKA
NLQEVLSSNAYMLFYERVRRPNLDGRSDE
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggacactgggatgttgtggtgtcgactagagaacacggataagcttgtgggggagttt
cttggcacaggacccacagtcaggaacaagatgataaaaaactggggtgttgtcggcggg
atcgctgctgcaattgcagctggagcatacgtcctgtggggcccgataactgagaggaag
aagcggaagagaggtatggtccctggtctgttgaacttgggcaacacctgcttcctaaac
tctttgcttcagggtttggcagcgtgtccgtctttcatcagatggctggagaagttttca
ggtctgccctcgatccagtcatgcaaagacaaccagctgtcttcaacactgctgcatctg
ctaaaagctctgtccagtgaggagccaggagacgaggatgttcttgatgcaggatgcctt
ttggatgttctcagactgtaccgctggcaaatcagctcatttgaggagcaggatgcacat
gaactttttcatgtcctcacatcttcactagaggaggagagaaacaggcaacccaaagtc
acacatctgtttgatatgcagtcccttgagtctcttcctgatgaagatgccaaagctttt
gcctgcataagcagagcagctcctcttcatccgatcccgggtccctggaaattccagcat
ccctttcacggtcgtctaacgagcaacatgtcgtgcaagcgctgtgaaattcagagtcca
gtacgatacgactcatttgagagcctctctctgtccatccctcttcctcagtggggtcgg
cctctctctctagatcagtgtttgcagcattttatttcatcggaaacaatcaaagaggtg
gagtgtgaaaactgtacaaagattcaacaaagcacaacgagaaacgggcaaattttcgaa
agccagaggacgacatttgtcaaacagctgaaacttggaaagctccctcagtgcctctgt
atccatctgcaaagactgacatggtccagcgaaggaacccccatcaagcggcaggagcat
gtccacttcacagagtatctatcaatggatcgttataaacacaactccacacagaggagt
cagcggttcacattggcccataaagccaaaaagacagaaagtttggacacagaagagtcc
acagaaaggcttagagctaatgggacagatgcagaacatcataacaacaacaaacctttt
tctaatggaacctgttcctccgtatttcttctctcccctggtttgaatccacagcgcggc
ttcacgtatgaattcagctccacagagtatttattcaagctgacggcagtgttggttcac
catggtgacatgcactcgggacattttgtcacctatcgtcgaagccccgccccaccctgc
agcacctcgccgttcagctctcagtggctttgggtgtcagacgattctgtgcggaaagcc
aacctgcaggaggtgctgtcttccaacgcgtacatgctcttctacgaaagagtgcgaagg
ccaaacctcgatggacgatcggacgagtga
DBGET
integrated database retrieval system
