Cyprinodon tularosa (White Sands pupfish): 119790236
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Entry
119790236 CDS
T07496
Name
(RefSeq) AT-rich interactive domain-containing protein 1B-like
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119790236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctul03000
]
119790236
03021 Transcription machinery [BR:
ctul03021
]
119790236
03036 Chromosome and associated proteins [BR:
ctul03036
]
119790236
Transcription factors [BR:
ctul03000
]
Eukaryotic type
Helix-turn-helix
ARID
119790236
Transcription machinery [BR:
ctul03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119790236
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119790236
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
119790236
NCBI-ProteinID:
XP_038151621
LinkDB
All DBs
Position
Unknown
AA seq
2203 aa
AA seq
DB search
MAAQVASALTRTNNKNKKLSGALAPELNSGKAGGGGGNAQRSGQMLAAGDGTLNNVDHHR
RGELGTMVHSTSSPDGHDKAGINLSASNSNTSPMETTLTANHKLKCAGSADAPQSQPPQF
GQFAPHQQRQSNTNNGQAPRGDRSVEHQQHGGKENLLVGQEDSQQHHGPGKGEGDLTCKP
MERMVASRFESNLGPPTNNSEFNNSYYPSRPCYDQQQSSGTGVTHSVENSHEGGYHNSQY
GQYPAYRAGYGGGAYGMMGPSGCRQPGNIMMGSNSSASHGKSPASGGFQKYPGQAQHQQQ
GPSGATPTLNQLLTSPSPMMRGYGGAYQDFGAPTPQQQAGMALGKDVTPHYGTSTAHWGA
QQRNHPLSMNAGSGGHGLSRTQVPAMDFIGMKRSQMYGMTNNPYSSPQQPGGASYPSSQP
YASPSPHRYPLSMQGRSQLGMTGMQYPQQQQVAPYGQQSMGGFSREQQGGQQGTPPYFSP
PQQTPTGPSQSSFLQPRPLPQQDAQQENYNIRGPVQGNSGKTNNEDGVPQDRPSSLPDLS
GSIDDLPTGTEARLGSAVGAGGSSNGSSSSSSSQGEPGGASNQRQSPFSPHASPHLSGQR
SGLSPSPVGSPVGSTQSQQSRSGSGPISPASGPPANTTAPGPAVAPLSSGNGPDASHLPV
TRSPMTQERGFMSNMQRNQPGSQFAPPQSGPPMSPHPSQGGSMYPSMGPYSQSGPTGPYG
PQGPQYGHQGNYPRPSNYIGSTGSSYSGHCNSMGMNATSPMHGQGPGGRSHGPGGQNRTY
PVMGPTSPSMPQPAGPGMGPPSNRKPQEGVVANSVHNRQGSYQGPGINQVSAGSYSQPTS
NNSSTTGNGQGPGYGTPPSGAMGLSGESIMSPENKLRLDVKDDSGQNNEPHKPKLQDGYM
NNNNSSVSQPATPGSTLPVPSPLSPSPASLSSYHGDDSDSISSPPWPLKTPSSPKATPNS
SISGERVSRLYDLGSEPERRSWVERYLTFMEERGTPVSQLPVVGKKPLDLWKLYVAVRDI
GGLAMVNKNKKWRELSGTLNVGTSSSSASTLKKQYIQYLFAYECKMERGEEPPTDSNSGG
SLTEGDSRKQVKIQPPSPANSGGSLQGPQTPQSSGSSSAAETAGDLKPPTPATTPLGQVT
PLPPNRSSVSVQDPFSEVSDPAFQKRTGSLPPSAPYQQALGMPDMMMRMQYDAKDPFAGM
RKMAGADPYIPSQMSSGGMQDLYSRAPSGLSMSQRSQYPYGPGYDRRPDHMMGMEGTMGP
PGGQNNMGHSNSEGNIYSPSRYSSQQRHDGYGQQYPSMPYGMHPSGMYPQQQGYKRQLDG
MYGPPPKRHETEMYAMQYTNQQPDVYNHYGGGYSGPESRPIQGQFPYPYHRDRMAPSGQN
QHSMMGGGPTSNHAAEGPNMWPSRTDLSYPYHGRQGPTSQMQPYGSVCRDDMEGRSAQDQ
WHRQLPYMSSSGGMASMSSRHSSYSNPPSMTNHLPRAPSPGAFQRSMESRMSPSKAPFMS
PMKMPKPGMAMMGSQASGPMCQFPPHLRRDLNYPPGSVEATMPILKPKRKLTSKDCGTPE
AWRVMMSLKSGLLAESTWALDTINILLYDDSTVASFNLSQLPGFLELIVEHFRRCLIEIF
GILEEFEVRTIIPKSQLDTGSMQNEDTTHDKEADSAILTGPKTSPAAEIQEKQTGDTDEK
RLPVTEEKAEVRNRKQDPNTTKNKENLNKEQEGKELEVVDAHEIKKEFPGGLPAVSESKP
KQASKYDKLPIKIVHKDDMIEDITERLGYVSEFDSGLLHWQAGGGDSTAHIQTHFELRTD
PSARDGTRTLDESQAENKIKEGNRKPLKHITATIDDVLCARVDALSYAHPARSLPSYPFR
VHLDGEDDHITLLEDEPRCLDEAPLCTTSSWQDSLSKRCLCVSNIVRSLSFIPGNDMEMS
HHPALVLLLGRLLLLHHVHPERNRSAPSYQRDVQQEQGLSSGKQEWWWECLCLLRENAMV
TLANVAGHLDLSTYSDTICLPILDGLLHWMVCPSAEAQDPFPSGAPHSQLTPQRLVLECL
CKLSIQDGNVDLLLATPPFSRQEKLFAVLVRYVGQRKAQVYREMAVAVISHLAQGDPTAA
RAIALQKASVGNLVAFLEDGVSMAQYQQNPHSLLHMGPPPMDPPSVNMMCRAAKGLLAMA
KVEENKKEFVLYESRLLDISISSVLNTGVVAIVCQVLFHLGKL
NT seq
6612 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcaagtggcatcggctctgaccagaactaataataaaaataagaaattatca
ggcgctttggctccggagctgaattctggaaaagccgggggaggaggagggaacgcgcag
cggagcggacagatgctggcagccggcgatggaactctgaataatgtagatcatcaccgc
agaggcgagctcggcaccatggtccattcaacttcctctccggacggccacgacaaggcc
gggattaacctctcggcgtccaattcaaacacttctccaatggaaacgactctgactgcg
aaccacaaactgaaatgtgcggggagcgcggatgcgcctcagtctcagccgccgcagttc
ggccagtttgcgccacaccaacagcgacaaagtaacactaacaacggacaggccccccgc
ggggacagaagtgtggagcaccagcagcacggtgggaaggagaacctgttggtggggcag
gaggactcccagcaacatcacggcccggggaaaggtgagggggacctcacctgtaaaccc
atggagaggatggtggcctccaggtttgaatccaacttggggccccctaccaacaactct
gagtttaataacagctattatccttcaaggccgtgttatgaccaacaacaaagcagtggg
acgggggttacgcactccgtggaaaactcccacgaagggggttaccacaacagccagtac
ggccagtatcctgcgtaccgggcgggttatggcggcggggcctacgggatgatgggcccc
tccggatgcaggcagccaggcaacatcatgatgggcagcaactcctctgcgagccacggc
aagtcccctgcctcaggtgggtttcagaagtacccagggcaagcccagcatcagcagcag
gggccctcaggggccacgccgactctcaatcagctgcttacgtccccaagcccaatgatg
cggggttacggaggtgcttatcaagatttcggggcaccgacccctcaacagcaggcaggc
atggcgttggggaaggacgtgaccccccactatggaaccagcactgcgcactggggagcg
cagcagcggaaccacccgctctccatgaacgcagggagcggagggcatggcctcagcaga
acacaggttcccgccatggacttcattggtatgaagcgctcacagatgtatggaatgaca
aacaatccatactccagtccccaacagccagggggtgcgagctacccctcaagccagcca
tatgcatcaccttctccacatcgatatccattgagcatgcaggggaggagccaattgggg
atgactggcatgcaataccctcaacagcagcaagttgcaccatatgggcagcagtcgatg
gggggattcagcagggagcagcagggagggcagcagggaacccctccgtatttcagtcct
cctcaacaaactcccacaggcccatcccagagttccttcctgcaacctcgaccccttcca
cagcaggatgctcagcaagaaaactacaacattagaggacctgttcaagggaactctgga
aagaccaacaatgaggatggagttcctcaggaccgcccttccagtctgccggatctctct
ggctcaattgatgacctccctacagggacagaggccagactgggctcggcagtcggtgct
ggtggatcctccaatggcagcagtagtagtagtagtagccaaggggagccaggaggcgcc
agtaaccagaggcagtcccccttttctccacacgcctcacctcacctctctggccagagg
agtgggctctctccctctccagtgggatcccctgtgggctccactcagtcccagcagtct
cgttcaggctcaggaccaatttctcctgccagtggaccccctgctaacaccacagctcca
ggtccagctgtggccccactgagctctggaaatggaccagatgcatcccatctgccagtc
acacgctcccccatgactcaggagagaggtttcatgtccaacatgcaaaggaaccagcct
ggatcccagtttgcacctccccagtccggacctcctatgtctccccacccctcacagggg
ggatcaatgtatcccagcatgggtccgtattcacagagtggccccacgggtccctatgga
cctcaaggacctcagtacggacaccaaggtaactaccctcgcccctctaactacatcgga
tcaacaggaagcagctacagcggtcattgcaacagtatgggtatgaatgctactagccca
atgcatggtcaaggccctggaggaaggagccacggccctggaggccagaacaggacctac
ccagttatgggtcccacttctcccagcatgccacaaccagctgggccaggaatgggtcct
ccatctaatcgcaagccacaggaaggagtggtagccaactccgttcacaacaggcaggga
agctaccaaggccctggcatcaatcaggtgagcgctggctcctacagtcagccaacaagt
aacaacagttcgaccacaggaaacggccaaggtcccggttacggtaccccgccttcagga
gcaatgggcctctcaggagaaagcataatgagcccagaaaataaactgagattggatgtc
aaagatgacagcggccaaaacaacgaaccacacaaaccaaagctgcaggatggttacatg
aacaataacaacagcagtgtgtcccagccagctactccaggcagcaccctgcccgtaccc
tcccctctttcacccagtcctgccagcctgtcttcctaccacggagatgacagcgatagc
atcagtagtccaccttggcctctgaagaccccctccagtcccaaagccactcctaactcc
tccatcagtggggagcgagtcagccgactctatgaccttggttcagagccagaaaggaga
tcttgggtggagcgctacctaaccttcatggaggaacggggaacgcctgtttcacagctc
cctgttgtgggaaagaagccgctggatctctggaagctgtatgttgctgttcgggatatc
ggaggccttgctatggtgaacaagaacaagaagtggcgcgagctgtccggcaccctgaat
gtcggtacatccagcagctctgccagcacgctgaagaagcagtacatccagtatctgttt
gcctatgagtgtaaaatggagagaggagaggagccgccaacagacagcaacagcggcggc
agcttgactgaaggggacagcaggaagcaggtcaagatccagccgccctcgccagccaac
tcaggtggctccctccaaggtccacagacgcctcagtcatctggcagcagctctgcagca
gagacagcaggtgacctgaaaccccctacaccagccaccaccccactgggacaagtcact
ccactgccccccaacaggagcagtgtaagcgtgcaggaccccttctctgaggtgagcgac
ccagcctttcagaagcgaacaggcagcctgcccccctcagctccgtaccagcaggccctc
ggcatgcctgacatgatgatgaggatgcagtatgatgctaaggaccccttcgcagggatg
aggaagatggcaggagctgatccatatataccaagccagatgtccagtggaggtatgcag
gacttgtacagtcgggccccatcaggcctgagcatgagccagcgctcccagtatccatat
ggaccaggctatgaccgcagacctgaccatatgatggggatggagggaaccatggggcct
cctggaggtcaaaacaacatgggacactcgaatagtgaaggcaacatttattctcccagc
agatactcttcacagcagagacatgacggctatgggcagcagtatcccagcatgccgtat
gggatgcatccatctgggatgtacccacagcaacagggctacaagcgacagttggatgga
atgtacggtcccccgcccaaaagacatgagactgaaatgtacgccatgcagtacaccaac
cagcagccagatgtgtacaatcactacgggggtgggtactcaggccctgagtctagaccc
atccaaggacagttcccttacccctaccatcgagaccgaatggctccatctggccagaac
cagcacagtatgatgggtggggggccaacctctaaccatgctgctgagggaccaaacatg
tggccttcgagaacagatctaagctatccctaccacggcagacaggggccaacgtcccaa
atgcagccgtatggctctgtctgcagggatgacatggaaggtcgctccgcacaggaccag
tggcaccgtcagcttccctacatgtcatcctcaggcggcatggcctccatgtcatcacgc
cattcatcctattccaaccctccatccatgaccaaccacttgcctcgagcgcccagccca
ggggcctttcagcgctcgatggaatctcgaatgtcacccagtaaagcccctttcatgtcc
cccatgaagatgcctaagccagggatggccatgatgggctcacaagccagtggaccaatg
tgtcagtttcctcctcatctgaggagggaccttaactaccctccagggtcagtagaagcc
acaatgccaatcctcaagccaaaacgcaagctcacatcaaaggactgtgggacgcctgaa
gcctggcgcgttatgatgtctctgaagtccggcctactggcagaaagcacatgggcttta
gacaccatcaacatcctgctgtatgatgacagtacagtggcctccttcaatctttctcag
ctgccaggattccttgagttaatcgttgagcacttccgacgctgcctgattgagattttc
ggaatcttggaagaatttgaggttcgcacaataattcccaaaagccaactagatactggt
tcaatgcaaaatgaagacactacccatgacaaggaagcagactctgcaatcctaactgga
cctaaaacatctccagcagcagaaattcaggagaagcaaacaggcgatacagatgagaaa
agactacctgtcactgaagagaaggctgaggtgcggaataggaagcaggatcccaataca
accaagaataaagagaacctgaataaagagcaagaaggaaaagaattggaagtagtggac
gcacatgaaattaaaaaagaatttccaggtgggcttccagcggtttcagaatccaaacct
aaacaagccagtaaatatgataaactcccaatcaagattgtgcacaaagatgacatgatt
gaagacataacggagcgcttggggtatgtctctgagtttgacagtgggctgttacactgg
caggcgggtggaggtgactccactgcacacattcagacacactttgaactgcgaactgat
ccctcagccagggatggtacaagaacattggatgaaagccaagcagaaaacaagataaaa
gagggaaacaggaaaccactgaaacatatcactgcaactattgacgatgttttgtgtgcc
agggttgacgccctgtcatatgcccaccctgctcgatcattgccatcttacccattcagg
gtacatctggacggagaggatgaccatattacccttctggaggatgaacctcggtgcctg
gacgaagctccactctgcacaacttcctcctggcaggactctctctctaagaggtgcctt
tgtgtttccaacatcgtccggagtctgtcctttatccctgggaacgacatggaaatgtct
caccatcctgccctcgttctcctcctgggcaggctgcttttgctgcaccacgttcaccca
gagaggaaccggtcagcaccaagctaccagagggacgtacaacaggagcagggactgtct
agtggcaaacaggagtggtggtgggagtgcctgtgtctgctcagggagaatgccatggtc
acacttgccaatgttgcaggacaccttgatctatcaacctattcggacaccatttgcctc
ccaatcctggatggccttcttcactggatggtttgtccctcagctgaagcccaggacccg
ttcccgtcaggagctccgcactctcagctcactccccagaggctggtgctggaatgcctc
tgcaagcttagcatccaggatggcaacgtggacctcttactggccacgccacctttcagc
agacaggaaaaactctttgctgtcttggtccgatatgttggtcagaggaaggcgcaggtg
tacagagagatggcggtggctgttatctcacacctggcacagggagaccccactgcagca
cgagccatcgccttgcagaaggctagtgtgggtaacctggtagccttcttggaggatggt
gtcagtatggcgcagtaccagcagaaccctcacagtttgctacacatgggaccccctcca
atggacccacccagtgtaaacatgatgtgccgggcagctaagggtctgttggccatggct
aaagtggaagagaacaagaaagagtttgtactgtacgaaagcagattattagacatctcc
atatcctcagtgctcaacacaggagtggtcgccattgtttgccaagttctctttcactta
ggaaaattatga
DBGET
integrated database retrieval system
