Cyprinodon tularosa (White Sands pupfish): 119790276
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Entry
119790276 CDS
T07496
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctul03021
]
119790276 (supt6h)
03036 Chromosome and associated proteins [BR:
ctul03036
]
119790276 (supt6h)
Transcription machinery [BR:
ctul03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
119790276 (supt6h)
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
119790276 (supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
SPT6_acidic
Spt6_S1
S1
S1_RRP5
HHH_3
HHH_9
Tex_YqgF
SH2
Tex_N
DUF7798
Motif
Other DBs
NCBI-GeneID:
119790276
NCBI-ProteinID:
XP_038151699
LinkDB
All DBs
Position
Unknown
AA seq
1749 aa
AA seq
DB search
MSDFIDSEAEESEEEFEESDLKPKKTQRFVEEDDEEEDVENPEEQDEHGNLRGLIDDDDD
VEEEEEAEKSGSGGGSDSEEEVKHRRKKRTYDDCLDDDDLDLIEENLGVKVKRRKKKYDR
VKTLDDDEDDDEKDLIADEIFHMDGEGELEEGEAVDEPIQQPDEDEEGDEEESDIDDFIV
DDDGQPITKKGKGKRFSGYTDAALQEAQEIFGGDFDFADFDADNYDQGEEEEEDQDDESW
DRPKKRPTKRQGRKSIFELYEPSELESSHMTDQDNEIRSTDMPERFQLRSIPVKPAEDDE
LEEEAEWIFKHGFSTLTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALNFMRNQQFEV
PFIAFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFQKMQSFQFEQISADPD
KPLADGIRPLDTADMERLKDVQTLEELSDVYNHFLLYYGRDIPKMQNSAKSKKKKLKKIK
EVSEDGEEEEFEVEEEEEEQKGPDLKLASRRDMYSICQSVGLDGLAKKFGLTPEQFGENL
RDSYQRHETEQFPAEPLELAKDYVCSQFANPEAVLEGTRYMVAMQIAREPLVRHVLRQTF
QERAKINIKPTKKGKKEVDEAHFAYSFKYLKNKPVKELNGDQFLKMCLAEEEGLLSIDIC
IDLIGVKGFAGDQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERALNQFLYPQMAKELK
SKLIAEAKESIVKSCCRRLYNWLKVAPYRPDQQVEEDDDLMDESQGKGIRVLGVAYAPSR
DTPVFCALINGDGEVVDFLRLPYFMKRRNAFREDEREKKAQDVENLKKFLSSKKPHVVAV
AGENRDAQMIMEDIKRTISELEQESSLPAVGVELVDNELATLYMNSKKSENDFRDYPPLL
RQAVSIARKIQDPLIEYAQVCSTDEDILCLKLNPLQEHVVKEDLLNALYCEFINRVNEVG
VDVNRAIAHPHTQSLVQYVCGLGQRKGAHLLKILKQNNTRLENRTQLVTMCHMGPKVFIN
CAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGALE
EILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRVPYRVPNTEEVF
NLLTKETPETFYIGKLITSVVTGIAHRRPQGESYDQAIRNDATGLWQCPFCQQDNFPELS
EVWNHFDSGSCPGQAIGVRSRLDNGVQGFIPTKFLSDKVVKHPEERVKVGMTVHCRIMKI
DIEKFSVDLTCRTSDLMDKNNEWKLPKDSYYDFDTEAEDQKQEEELKKKQHRTPYIKRVI
AHPNFHNISFSQAEKMMETLDQGDLIIRPSSKGENHLTVTWKVADGIYQHVDVREEGKEN
AFSLGHTLWINNEEFEDLDEITARYIQPMASFARDLLGHKYFQDCSGGSKEKMEELLIRT
KREKPTFIPYFISACKDLPGKFILGYQPRGKPRIEYVTITPDGFRYRSQIFPTVNGLFRW
FKDHYQEPVPGITPSNSSRTRTPASVNATPANINIADLTRAVNALPRNMTSQMFNAIAAV
TGQGQNPNATPAQWGSSQYGYGGSTGGGGGSSSAYHVFATPQQPMATPLMTPSYSYTTPS
QQPLGTPQYPGSTPQSSHVHTHPHLPLPSHHGPPSGHHGHASSTPSSSTSSRGRTPQQQT
PQQPKPSSSASSSAVDWGKMAEQWLKEKEAEDRKKSQRMTPRPSPSPMIESTPMSLPGDA
TPLLDEMDR
NT seq
5250 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactttatcgacagcgaggccgaggaatcagaggaagagttcgaagagagcgac
cttaaacctaagaagacccagagatttgtggaggaagatgatgaagaagaggatgtggag
aaccctgaggagcaggatgaacatggaaatttacgtggattaattgatgacgatgatgat
gtagaggaggaggaagaggctgaaaaaagtggaagtggcggaggaagcgactctgaggag
gaagtaaaacatcgacggaaaaagcgcacttatgatgactgcctggatgacgatgatctt
gacttgattgaggaaaatcttggtgtaaaagtaaaaaggaggaagaagaaatatgaccgt
gttaaaactctggatgatgatgaagatgacgatgagaaagatctcattgctgatgagatc
tttcatatggatggggagggggagctggaggaaggcgaggctgtagacgaacccattcaa
caaccagatgaggatgaggaaggcgatgaggaggagtcagatattgatgattttattgtg
gatgacgatgggcagcctatcaccaaaaaaggaaagggaaagaggttctcaggatataca
gatgcagccctccaggaggcccaggagatttttggtggagactttgactttgctgacttc
gacgcagacaactacgaccagggcgaagaggaagaggaggatcaagatgacgagagctgg
gaccgacccaagaaacgacccacaaagaggcaggggaggaagagtatctttgagctctat
gagcccagtgagctggagagcagtcacatgactgaccaggacaacgagatccggtccaca
gacatgcctgagaggttccagttgcgatccatccctgttaaacctgcagaggatgatgag
ttggaagaagaagcagagtggatcttcaaacatgggttctccacgctcaccatctccatg
caggaaagcacagactatcttgatcgtggaacaacaacaaacttcagcaggaaaggaccc
agcaccattgccaaaattaaagaggcccttaactttatgagaaatcaacagtttgaggtt
ccattcatagctttctacaggaaagaatatgtggagccagagctgaatatcaatgacctg
tggaaggtgtggcagtgggatgaaaagtggacgcagttgaagacccgtaagcagaatctg
actcgcctgttccagaagatgcagtccttccagtttgagcagatatcggcggaccctgac
aaaccattggctgatggcattcgtcctctggacacggctgacatggagaggctgaaggat
gttcagactctagaggaactcagtgatgtgtacaatcactttttgctgtactacggccga
gacatcccaaagatgcagaattctgcaaaatccaagaagaagaagctcaagaaaattaag
gaagtgtcagaagatggagaggaggaggagtttgaggttgaagaggaggaggaggagcag
aaaggacccgaccttaagctggcatctcgtagggatatgtacagcatctgtcagagtgtc
ggactcgatggtctggctaaaaagtttggattgactccagagcaatttggagagaatctg
agagacagttaccagcgtcacgagactgagcagttccccgccgagccactagagctggcc
aaagattacgtctgcagtcagtttgccaatcctgaggcggtgctggaaggaaccagatac
atggtggccatgcagatagctcgggagcctctggtcagacatgttctccgccagaccttc
caggaaagggccaagatcaacatcaaacctacaaagaaaggaaaaaaggaggtggatgag
gctcattttgcctattcctttaagtacctgaagaataagcctgtgaaagagctgaatggg
gatcagttcttgaagatgtgcctggcagaggaggaggggcttctctccattgatatctgc
atagatctaatcggtgtcaaggggtttgctggagaccagacatacttcgatgagatcaag
cagttttattacagggacgagttcagccaccaggtgcaggagtggaacagacagcgaact
ctggccatagagagagctctcaaccagttcctctaccctcagatggccaaggagctcaag
agcaagctaatcgctgaggccaaagagagcattgttaagtcctgctgccgccggttgtac
aactggcttaaagtggctccctacagacccgaccagcaggtggaggaggatgatgaccta
atggatgagagtcaggggaaaggcatccgtgtgttgggggtggcctatgctcctagcaga
gacacaccagttttctgtgctttgatcaatggggatggagaggtggtggacttcctccgt
ttgccgtacttcatgaagaggaggaatgccttcagggaggatgagagggagaagaaggct
caggatgttgaaaatctcaaaaagtttctttccagcaagaaacctcatgttgttgctgtt
gccggggaaaatcgagatgctcagatgatcatggaggacataaaaaggaccatcagtgag
ctggagcaggagtcgtccctgcctgctgtgggagtggagctggttgacaatgaactggcc
acgctttatatgaacagcaagaagtcagagaatgacttcagggattatcctcctttgctg
cgacaagctgtttcaatagctaggaagatccaggatcctctgattgaatacgctcaggtc
tgcagcaccgatgaagacattctctgcctgaaattaaacccactgcaggaacacgtggtt
aaggaggatttgctcaacgctctctactgtgaatttatcaaccgggtcaacgaggtcggg
gtagacgtgaaccgagcgatcgcccatccccacactcagagcctggtccagtatgtctgt
ggtttggggcagaggaagggtgcccacctcctcaagattttaaagcaaaacaacactcgt
ctggaaaacagaacgcagctggtcacaatgtgccacatgggacccaaagtttttatcaac
tgtgctggtttcatcaagattgacacagcgtccctcggggacagtacggactcctacata
gaggtgctggatggttctcgtgtccaccctgagacgtacgagtgggctcgcaagatggct
gttgacgcactcgagtacgacgagtctgcagaagatgcgaaccctgccggagctctggag
gagatcttggaaaatccagaacgcttgaaggatctggacctggatgccttcgctgaggag
cttgagagacagggttacggaaacaaaggaattacgctttatgacatccgagctgagctg
agctgcaggtacaaagacctcagggttccctacagagttcccaatacagaggaagtcttc
aatctgctcaccaaggaaactccagagaccttttatattggtaagttaataaccagtgtg
gtaactggtattgctcaccggcggcctcagggagagagctacgaccaagccattaggaat
gatgctacaggactgtggcagtgtcccttctgccagcaggacaatttccccgagctgagt
gaggtgtggaatcactttgacagcggctcctgtccgggtcaggccatcggggtccgcagc
agattagataatggagtccagggattcattcccaccaaatttcttagcgataaagtggtc
aaacaccctgaggagagggtcaaggtgggcatgactgttcactgcaggattatgaagata
gacatagagaaattcagtgttgacctcacgtgccgcacctcagatctgatggacaagaac
aacgagtggaagcttcctaaagacagctactacgacttcgacacagaagcagaggatcag
aaacaagaggaggaactcaaaaagaaacagcaccgcacgccatatataaagcgcgtgatc
gcccaccccaacttccacaatatcagttttagccaggcagagaagatgatggagaccctc
gaccagggagacttgatcatcaggcccagcagcaaaggggagaaccacctaacagtcaca
tggaaggtggctgatggcatctaccagcatgtcgacgtgagagaggaaggcaaagaaaac
gctttcagtttgggccacactctttggatcaataacgaagaattcgaggatctggatgaa
ataaccgctcggtatattcagccaatggcctcatttgcgcgagatctgctgggacataaa
tacttccaggactgcagcggaggaagcaaagagaaaatggaggaattattaatccgaaca
aaacgagagaagcctaccttcattccttactttatatcggcttgtaaagacctcccaggg
aagtttattttgggctaccagccccgtggaaaacctcggattgagtatgtgaccatcacc
ccagatggctttcgctaccgttcacagatatttcctacagtcaacggacttttccgatgg
tttaaggaccattatcaggagcctgtgccgggtattactccgagcaacagcagcagaacc
agaacccctgcatccgtaaacgcaactccagccaatattaatattgcagacctaacacga
gccgtcaatgccctccctcgcaacatgacttcccagatgttcaacgccatcgctgcagtc
acgggccaaggccagaacccaaatgccacccctgcccagtggggctccagccagtacggc
tacggcgggagtacaggaggaggaggaggaagctcttctgcttatcatgtgtttgccaca
ccccagcagcccatggcgacacccttaatgacgcccagttactcctacacaacgccaagc
cagcagcccctgggtacaccgcaatatcctggctccacccctcagtcttcacacgtacat
acccacccacacctaccgcttcccagccatcacggccctccgagcggtcaccacggccac
gcgtccagcacaccctcatcgtccacctcctcccgagggcgaacaccgcagcaacaaacg
ccgcagcagccaaaaccgagcagcagcgcctcctcctcggcagtggactggggcaagatg
gcggagcagtggctcaaggagaaagaagcagaggacaggaagaaatcccagaggatgacg
ccacgaccttcacccagccccatgatcgagagcacgccaatgtcgctgcctggagatgcc
acaccgctgctagacgaaatggaccgatag
DBGET
integrated database retrieval system
