Cyprinodon tularosa (White Sands pupfish): 119790357
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Entry
119790357 CDS
T07496
Name
(RefSeq) collagen alpha-1(XXVIII) chain-like
KO
K23619
collagen type XXVIII alpha
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ctul01002
]
119790357
Peptidases and inhibitors [BR:
ctul01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
119790357
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_CoxE
Sec23_trunk
Motif
Other DBs
NCBI-GeneID:
119790357
NCBI-ProteinID:
XP_038151809
LinkDB
All DBs
Position
Unknown
AA seq
1216 aa
AA seq
DB search
MVPSLHWLLLLWRLQVLLAQDYEGDLEDEVVTPRRRSKLLAPNSIPQNGRPLIDEDCSLE
LAFLVDSSESAKDNHEQEKRFVANVMDRLQGLRLQTGRGLSSRAALLQYSSQVKIEQTFK
DWRGIDNFKARIAPIPYIGHGTYTTYAITNLTRIYLEESDSSSIKVAILLFDGVWHPRNP
DIFSAVSDAKNQGVRFFTIGITPEANEAANVKQLSRIASSPATRYLHNLQDVGIVDKVIK
EITALADENCPLSQSQCQCEKGERGPTGSPGKKGRPGEDGSPGLKGKKGESGLSGLPGQE
GAEGKPGYKGEKGERGECGTPGVKGDRGPEGSIGPRGNRGLQGLPGQPGDMGPEGNMGKK
GERGLPGPPGIQGETGIGLPGPKGDVGFQGQPGPPGPPGIGESGPPGPQGPQGVQGERGP
TGEGLPGPKGERGIEGPRGPRGQPGPGIKGDKGDFGPPGFPGPLGLPGLGIQGEKGTVGP
RGPPGIRGPPGEGFPGPKGDQGLPGEVGAPGERGAGEPGAKGEPGSAGLSGLPGLPGEDG
APGQKGEPGAVGLRGPEGAPGIGTQGEKGDQGQRGIRGLTGPPGIAGPSGPKGEPGTQGR
PGSAGPPGRFITGPKGDPGPSGPPGPIGETGYGLPGPKGDRGDPGPAGPFGPKGDGFPGP
MGPPGLPGLPGEPGSEGVGIPGPKGDVGFRGLPGLPGPPGEGVQGPPGNPGRPGPPGQMG
PQGLGVQGPKGEQGAQGVTGPRGLPGEGFPGEKGDRGSSGERGLKGFKGEFGDPGMPGQP
GLPGVKGEAGLTREDIIRMIKEICGCGIKCKERPMELVFVIDSSESVGPENFEIIKRFVT
TLVDRVTVGRNATRIGLIVYSLEVKLVFNLARYSNKEDIKEAIRNIQYMGEGTYTGTAIR
KATQEAFYSSRLGVSKVAIVITDGQTDKREPVKLDLAVREAHAANIEMFALGIVNSSDPT
QSEFLRELNLIASDPDSEHMLRIDDFNTLPALESKLVSQFCEDENGALIYNRITNGYNGQ
GNNGYNGNRIGTGSYATGGYGYRPIPQQDLLNGQRTGFNSGSGTGSSKGSSTIHVAGGQH
EATVITNRGNERGDTFNRGTSDYRTPPPAREGSSGSRVSSSSSSSKNISTSSSSVSVKYE
PPPRPALPKETVPLDPRCGLVLDQGTCREYNIRWYYDKQANACAQFWYGGCGGNRNRFDT
EEECKRTCVVSRVTAA
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atggtcccctccctgcactggctgctcctgctgtggagacttcaggttctgttggctcaa
gactatgaaggagacttagaggatgaggtggtcaccccgaggaggagaagcaaacttctt
gcacctaattccataccacaaaatggcagacctctcattgatgaagactgcagtttggaa
ttggcctttctggtcgacagctcggaaagcgccaaggacaaccacgaacaggaaaagcgt
tttgtcgccaatgtgatggaccgactgcagggcctccggctgcagaccggccggggactc
agctcccgtgctgctctcctccaatacagcagccaagtcaagatagagcagaccttcaaa
gactggaggggcattgataatttcaaagctagaattgctcccattccatacataggccat
ggcacctacaccacctacgccatcaccaacctaacacgcatttacctggaggagtcggac
agcagcagcatcaaggtggccatcctgctttttgatggcgtctggcacccaaggaaccca
gacatattttcagctgtgtctgatgcgaagaaccaaggtgttcggttcttcacaataggg
atcactcctgaagccaatgaagccgccaatgttaagcagttaagtaggattgctagttcc
ccagctacccgctacctccacaacttgcaagatgttggcattgtggataaggtcatcaag
gagattacagcgctggcagatgaaaattgtccattatcccaaagtcagtgtcaatgtgag
aaaggtgagagaggacccacaggttctccaggaaagaaaggacgtccaggagaagatgga
agccccggcctgaaggggaagaagggtgaaagtggcctcagtggacttccaggtcaggaa
ggagcagagggtaagccaggatacaaaggagagaagggagagagaggagagtgtggcaca
ccaggcgttaaaggagacagaggtcctgaaggcagtattggtccaagaggaaaccgtgga
cttcagggcttgcctgggcaaccaggtgacatgggacctgagggaaacatgggcaaaaaa
ggggaaagggggcttcctggaccacctggaattcaaggtgaaacagggatcggcctccca
ggaccaaagggtgatgtgggtttccaggggcaaccagggcctcccggtcctccaggaatt
ggcgagtccggaccaccgggacctcaagggcctcagggagtccaaggagaaagaggaccg
acaggagaaggtctccctggaccaaagggcgagcgaggcatagaggggccacgggggccc
agaggacaaccgggcccaggaatcaaaggagacaagggggactttggccctccaggtttt
ccaggcccccttggtctcccaggtttagggatccaaggagaaaagggaacagtgggtcca
cgggggccaccaggaataagaggtccaccaggagagggttttccaggacccaagggggac
caagggttgcctggtgaagttggagctccaggagaaagaggggctggtgagcctggtgca
aagggtgagccaggatcagcaggactgtcaggtttgcctgggcttcctggagaggatggc
gctccaggacaaaagggcgagccgggagctgtcggtctgcgaggtccagaaggtgcacct
gggattggcactcagggggaaaagggtgaccaaggccaaaggggaataagaggactgaca
ggcccacctggcattgctggaccctcggggccaaagggagaacccgggacccagggaagg
cctggttccgctggcccaccaggacgtttcattactggacctaagggtgatcctggtcca
agtggtcctcctggtccaatcggggagactggatatggacttcctggcccgaagggggat
agaggtgatccaggccctgcaggtccatttggtcctaaaggagatggctttcccggtccc
atgggtcctcctggcctgcctgggcttcctggagaacccgggtcggagggtgtgggcatc
ccaggaccaaagggggatgttggattcagagggttgcctggtttacctggacctccaggt
gaaggcgtccaaggtcctccgggaaaccctgggaggccaggtccaccgggccaaatggga
ccacagggactaggagttcaaggccccaagggtgaacagggcgcccagggtgtgacagga
ccaaggggtttacctggagagggctttccaggagaaaaaggtgacagaggctcatctgga
gaaagaggactaaaaggatttaagggagaatttggggatccgggaatgccgggacagcct
gggctgccgggtgtaaaaggggaagcaggcctcacaagagaggacatcattcgaatgatc
aaagagatctgtggatgcgggatcaagtgcaaggagaggccgatggagctggtgtttgtc
atcgacagctcagagagcgtgggccctgagaactttgagatcatcaagagatttgtgacc
actctggtggatcgggttacagtaggccgcaatgccaccaggattggtctgatagtctac
agcctggaagtaaagctggttttcaacttggcccgctactccaacaaagaggatatcaag
gaggccatcaggaacatccaatacatgggcgagggcacctataccggtaccgccatccgt
aaagccactcaggaggccttctacagctcacgcctgggcgtcagcaaggtggctatcgtc
attaccgacgggcagacggacaaacgggagcctgtcaagctggatttagccgtccgagaa
gcccatgctgccaacattgagatgtttgctttagggatcgtcaacagttcggacccaact
cagtccgagttcctccgagagctcaacctgatcgcctctgacccagacagcgagcacatg
cttcgtatcgatgacttcaacactttgccagctctcgagtccaagttagtcagtcagttc
tgtgaggacgaaaatggagccttgatatacaaccggataacaaacggttacaacggccaa
ggaaacaacggctacaatggcaacaggattggtactgggagctacgccactggtggttat
gggtacaggccgatacctcagcaagacctgcttaacggccagcggaccggctttaactct
ggatctggtactgggagcagtaaaggatccagcaccatccacgttgcaggaggacagcat
gaggccacagtaataaccaatagaggaaatgaacggggggacacatttaaccgtggcacc
tcagactatagaactccacctcctgccagagagggatcctctggtagcagagtttcttcc
tcatcctcatcctctaaaaacataagcacctcatcctcaagtgtttctgtgaaatatgag
cctccaccgcggccagctcttcctaaagagaccgtacccttggaccctcgctgcgggctg
gttctggatcagggaacatgtcgagaatataacatccgctggtattacgacaagcaggcc
aacgcttgcgctcaattctggtatgggggctgcggcgggaacaggaaccgctttgacaca
gaggaggagtgcaagaggacatgtgtggtttccagagtaacagcagcttga
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