KEGG   Cyprinodon tularosa (White Sands pupfish): 119790366
Entry
119790366         CDS       T07496                                 
Symbol
hcfc1a
Name
(RefSeq) host cell factor 1a
  KO
K14966  host cell factor 1
Organism
ctul  Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03083  Polycomb repressive complex
ctul04980  Cobalamin transport and metabolism
ctul05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ctul00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    119790366 (hcfc1a)
 09150 Organismal Systems
  09154 Digestive system
   04980 Cobalamin transport and metabolism
    119790366 (hcfc1a)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    119790366 (hcfc1a)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ctul01009]
    119790366 (hcfc1a)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ctul03036]
    119790366 (hcfc1a)
   03029 Mitochondrial biogenesis [BR:ctul03029]
    119790366 (hcfc1a)
Protein phosphatases and associated proteins [BR:ctul01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     119790366 (hcfc1a)
Chromosome and associated proteins [BR:ctul03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    NSL complex
     119790366 (hcfc1a)
   HMT complexes
    COMPASS/SET1 complex
     119790366 (hcfc1a)
    MLL-HCF complex
     119790366 (hcfc1a)
   Polycomb repressive complex (PRC) and associated proteins
    PR-DUB complex
     119790366 (hcfc1a)
Mitochondrial biogenesis [BR:ctul03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Other regulator of mitochondrial biogenesis
    119790366 (hcfc1a)
SSDB
Motif
Pfam: Kelch_3 Kelch_5 Kelch_4 Kelch_1 Kelch_6 fn3
Other DBs
NCBI-GeneID: 119790366
NCBI-ProteinID: XP_038151822
LinkDB
Position
Unknown
AA seq 1738 aa
MSAPGSAVSGTTPSVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL
HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWE
WKKLKAKNPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELR
PGSSVVGWDIPITYGVLPPPRESHTAVVYTEKTTRKSRLIIYGGMSGCRLGDLWTLDIDT
LTWHKPSVGGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACL
NLDTMCWETVLMDTLEDNIPRARAGHCAVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYL
ETERPHAPARVQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPATPAAASPATSATPSQ
PINSPKSPAPAAAAPSAQCLPQTAVLKVATQQSATGASVVTVRPSQPGKSPVTVTSLPPG
VRMVVPTQTTQGSPIGSSPQMSGMAALAAAAAATQKIPPSSGGTVLNVPTGATILKTVAV
SPGTTTVKMASPVMVSNPATRMLKTAAAQVGTATASSPTTTTRPIITVHKSGAVTVAQQA
QVVTTVVGGVTKTITLVKSPLTMGSSGTLISNLGKMMSVVQTKPVQTSAVTGQASTNPLT
QLIQTKGPLPAGTILKLVTSADGKPTTIITTSQAGGTGNKPTILNISGVSPTTTKQGTTI
IKTIPMSAIMTQPGATGVTSSAGMKTPITILTTKVMTTGTPGKIITAVPKLTTAAGQQGL
TQVVLKGAPGQPGTILRTVPMSTVGGVRLVTPVTVSSVKPTVTTLVVKGTTGVTTLGTVT
GTVSTSLAGATADSSSASLVTPITTLGNIATLSSQVINPTAITVSAAQTSLTSTSTLPSS
TMTVQNQPTQVTLITTPSGVEAQPVQDLPVTILASPTSEQPSSTEAGATGDSSGTVTLVC
SNPPCETHETGTTNTATTSSATIGAGQVCSNPPCETHETGTTNTATTSSATIRAGQVCSN
PPCETHETGTTNTATTSSATIGSGQVCSNPPCETHETGTTNTATTASSNLSTLRVCSNPP
CETHETGTTNTATTASSSMGAAQQLCSNPPHETHVTGTTNTATQASSSMNAGETGTTQSD
HTNPTPETGSEDTPSTASSSVEEDQTSTTTGQVQRVCSNPPYETHETGTTNTATTATCNM
ETGEGTATQQTEEGAEGTSTTEEAATTAATSVATTTQGRAITNVTQSTPAPGPSVPSISS
ITEGVSTAGGATEEPMQTEEPASAEAAPAEEPAAAMETHAEGEAAAATALNLPSELMSEA
QGATLMVTGLSDEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQVVMNEGDGSSETQ
QPTNIPIMLTQQELAALVQQQQQLQEAHAAAQQAAVDSSLPTEGLAPADSLNDPSVESNG
HNEMAASVTSAVASLLPRTTAETLAPSSTFTPSISVASPAKLQAAATLAEVANGIEGEKQ
APQPTPVKPVVKKENQWFDVGIVKVTNMVVTHFYVPADDSQGDDDSGAVPDYSQMKKMEL
QPGTAYKFRVAGINACGRGTFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVT
SGKIIEYSVYLAIQSSQTAEAKASTPAQLAFMRVYCGPNPSCLVQSSSLSNAHIDYTTKP
AIIFRIAARNEKGYGPATQVRWLQESGKDATSAKPAAKRPGTSPDPKTTGPKKARTDQ
NT seq 5217 nt   +upstreamnt  +downstreamnt
atgtctgcccccggttccgcggtgtctgggaccactccgtcggttctgcagccgcgatgg
aagcgggttcttggatggtcgggtccggtccctcggccccggcatggacacagagctgtg
gctataaaggaattgatggttgtgtttggaggtggaaacgagggaattgttgatgagtta
catgtgtacaacacagcaacaaaccagtggtttatcccagccgtccgtggtgatatccct
ccgggctgtgctgcatatggttttgtatgtgatggcacacgattgctggtgtttggaggg
atggtggaatatggaaaatatagcaacgacctctatgagctacaggccagcagatgggaa
tggaaaaaactgaaagccaaaaatccgaaaaatggacccccaccttgtcctcgacttggt
catagcttttcactcgttggtaacaaatgctacttgtttggtggactggccaatgacagt
gaggatcccaagaacaacattcccagatatctaaatgacttgtacacactcgagcttcgc
ccaggttctagtgtggttggttgggatattcccatcacatacggagttctgcctccacca
cgagagagtcacactgctgtggtctacacagaaaagacaaccaggaagtctcgcttgata
atctatggaggaatgagtggttgtcgtcttggagatctttggactcttgatattgatacc
ttgacgtggcacaaaccttcagtaggtggtacagcacctcttccacgaagtcttcactct
gccaccacaatcacaaacaagatgtatgtttttggcggatgggttcctctggtgatggat
gatgtcaaagtggccacacacgagaaagagtggaaatgcacaaacactcttgcttgccta
aatctcgacactatgtgttgggaaacagtgttgatggataccttggaagataacatccct
cgggctcgtgccggccattgcgctgtggctatcaattccagactctatgtctggagcggc
cgtgacggttatcgcaaagcttggaacaaccaagtctgttgtaaagacctttggtatcta
gaaacagagcgaccccatgctcctgccagggttcagttagtccgtgccaacacaaactct
ctggaggttagctggggagcagtttccacagctgacacttacttgctgcagctgcaaaag
tatgacatacctgcgaccccagccgcagcctcaccagctacgagtgcaaccccttcacag
cccatcaactctccaaagagccctgcacctgctgctgcagctccatctgcacagtgttta
ccacagacagctgttttaaaggttgcaacccaacagtctgccactggtgcatctgttgtc
acagttcgcccaagccagccggggaaatcccccgtcaccgtgacctctcttcctccaggt
gttcgcatggtagtgcctacccaaaccacccaaggatcgccaattggaagtagccctcag
atgagtggaatggcagctttagctgctgcagctgcagccacacagaagatcccgccctct
tctggtggcaccgttctcaatgttcccactggtgccaccattctgaaaacagtcgctgtt
tcccctggcaccaccacagtgaaaatggcttctcctgtaatggtgagtaacccagccacc
agaatgctgaaaaccgctgcagcccaggtgggcacggccacagcgtcctctcccaccacc
accaccagaccaatcatcactgtacacaaatctggtgctgtcacagtggctcagcaggcc
caggtggtcaccactgtggtgggaggagtcaccaagaccatcaccctggtcaagagtccc
ctcaccatgggtagcagtggcacattgatctccaaccttggaaagatgatgtctgtggta
caaaccaagccagtgcagacatcagctgtcacaggccaggcttccactaaccctctcaca
cagctcatacagacaaaaggtcccctcccagctggcaccatccttaaactggtgacttct
gccgatgggaagcccacaacaatcatcacaacctctcaggccggaggcacaggaaacaag
cccacaatcctcaatataagtggcgtctcacctactactactaagcagggcaccaccatc
attaagaccatccccatgtcggccatcatgacccagcctggagctacaggtgttaccagc
agtgcaggtatgaaaacaccaataacaatccttaccacgaaggtgatgaccactggaact
cctggtaaaattattactgctgtgcccaaactgaccactgcagctgggcagcaggggctg
acacaggtggtattaaagggggcgccaggacagcctggtacgattttgcgcactgtgccc
atgagcacagtgggaggtgtccgtctggttactccagtgacggtctcctctgttaagccc
accgtgaccactttggttgtcaaggggaccactggggtcaccacacttggcactgtcaca
gggacggtgtccactagcttggcaggagccacggcagacagttccagtgcttccttggtg
acacccatcaccacactgggaaacatcgctacactgtccagccaggtgatcaaccctaca
gccataacagtgtcagctgctcagactagtctgacttctacttctacactgccctcctct
acaatgactgtgcagaaccagcccactcaggttactctgatcacaacccccagtggtgta
gaagcccagcctgtgcaggatctccccgtaaccattctggcttctccaacttcggaacag
cccagctcaactgaggctggagcgacaggagacagctctggtactgtcaccctggtctgc
tccaacccaccctgcgagacccacgagacaggaaccaccaacacggcaaccacctcctca
gctacaatcggagcaggacaagtctgttccaacccgccctgcgaaacccacgagacagga
accaccaacacggctaccacctcctcagctacaatccgagcaggacaagtctgctccaac
ccgccctgcgaaacccacgagacaggaaccaccaacacggctaccacctcctcagctaca
ataggttcaggacaggtctgctccaacccaccctgtgaaacccatgagacaggaaccacc
aacacagccacaacggcatcttcaaacttgtctacgttacgcgtgtgctccaacccaccc
tgcgagacccacgaaaccgggacaacaaacacggctaccacagcttcatccagcatggga
gcagcccagcagttgtgttctaatcccccccatgagacccacgtgacgggcaccaccaac
acagcgacacaagcttcctccagcatgaacgcaggcgaaacaggaaccacgcagagcgat
cacacaaatcccacccctgaaacggggagcgaagacactccgtccacagcgagctccagc
gtggaagaggaccagaccagcaccacaacaggccaggtgcagagggtttgctccaaccca
ccatatgaaacacacgagaccgggaccaccaacactgccaccaccgctacatgcaacatg
gagacaggggaaggcacagctacccagcaaacggaggaaggagcagaaggaacaagcacc
acagaggaagctgctaccactgcagctactagtgtagctacaaccacccaaggcagagcc
atcacaaacgtgactcagtccacacctgcccctgggccttcagtgccttcgatttcatca
atcacagaaggggttagtacagcaggcggcgccacagaggagccgatgcagacagaagaa
cctgcatcagcagaagctgcacctgcagaggagcctgcagcagctatggagacacatgca
gagggagaggcagctgctgcgacggccttgaacctgccctcagagttgatgtcggaggcc
cagggggccacgctgatggtgacagggctgtcggacgaagagctggccgtaactgctgca
gctgaggctgctgcccaggctgcagccacagaagaggcgcaggctctggccatccaggct
gttctccaggcagctcaacaagttgtaatgaatgaaggtgatggttcttcagagactcag
cagcccaccaacatccccatcatgctgacccagcaagaactagcagctctggtccagcag
cagcagcaactgcaggaagctcatgctgcagcgcagcaggccgcagtggacagcagcctt
cccaccgagggcctggcacctgctgacagcctcaatgacccgtctgtagaaagcaacgga
cacaatgaaatggctgcctcagtcactagcgctgtggcatccctcctaccgcgaaccact
gctgagactctggctccatcgagtacattcacaccgtctatatccgtagcaagtccagct
aagctccaagctgcagccactctcgcagaggtggccaatggaattgagggagagaaacag
gcccctcagccaactccagtgaagcctgttgttaaaaaggagaaccagtggtttgacgtt
ggaattgtaaaagtgacaaacatggttgtcactcacttctatgtgccagcagatgattct
caaggagatgacgactctggcgctgtaccagactacagtcagatgaagaaaatggaactg
cagcctggaacggcgtacaagttccgtgtggctggaatcaatgcctgtggtcgtggaaca
ttctctgagatttctgctttcaagacctgcctacctggattcccaggggccccatgtgcc
atcaaaattagcaagagtccagatggtgctcacttgacctgggagccgccttcagtgaca
tcagggaaaatcattgagtactccgtatacctggccatccagagcagccagacagctgag
gccaaggcttccaccccggcccagctagccttcatgcgagtgtattgtggacccaacccc
tcctgcttggtgcagtcgtccagcctgtcaaatgcccacatcgactacacgactaagccg
gctatcatcttccgcatcgctgcccgcaatgagaagggttacggtccagccactcaagtt
cgatggctacaagaatctggtaaagacgcaacttctgcaaaacctgccgctaaaagacca
ggcacctctcctgatcccaagacaactggtccaaagaaggcgaggacggaccagtga

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