Cyprinodon tularosa (White Sands pupfish): 119790474
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Entry
119790474 CDS
T07496
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ctul04121
]
119790474
Enzymes [BR:
ctul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119790474
Ubiquitin system [BR:
ctul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119790474
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-RING_11
zf-C3HC4_4
MscS_porin
CENP-F_leu_zip
zf-RING_Vps41
Crescentin
RING_XB3-XBAT31
CALCOCO1
Sec3_CC
Gp58
CC2-LZ
WEMBL
zf-RING-like
KxDL
zf-RING_16
Lzipper-MIP1
RINGv
TSNAXIP1_N
Zn_ribbon_8
COG3_N
Fez1
zf_RING_Vps8
GAS
ABC_tran_CTD
Aminoglyc_resit
Aida_N
SOAR
ADIP
bZIP_1
CCDC113_CCDC96_CC
CCDC144C
DUF1664
FANCL_C
AAA_13
FlaC_arch
SLX1_C
MAD
Prok-RING_1
Laminin_II
zf-Nse
Motif
Other DBs
NCBI-GeneID:
119790474
NCBI-ProteinID:
XP_038151940
LinkDB
All DBs
Position
Unknown
AA seq
448 aa
AA seq
DB search
MPIRAYCTICSDFFDHARDVAAIHCGHTFHYECLLQWFQTAPTKTCPQCRKQVSTRHIIS
KLFFDIGGEEEAGSADPESLQNELDRMKAQLSSKERDWREKQKVIDGLKDTVNKQKRDLD
NIRKEIMEKEMICIALRKQMAYMETQQNEVQAAKEEVRRLRTKMKTFEGLDVLLHGQRDE
VDSMITDMGVSQAAVEQLSIYCISLKKEYDNLKGSLKSSNDMCEKLKREVLSSNNKLQKA
SLEVNQTREDMKSLQRDLANADREISSLKKKVEFLQKTLSTPTRTNEALSRLVFESPAPL
ELKPPRLHQPTRGEDIDLDATYDITTPDDISKRPTKVPSKKMRLEQPGSSVSKHSEKSSS
LSKPQDEALDPFLRNSLLFRKKTFGSMLDPQRKAGVVRTGYDGLGGRTKFIQPSPLAEIR
PLIKTKRKKVTRPPSKHPTCLTLDSFLE
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcctatccgagcatattgtacaatctgctcggatttcttcgatcacgctagagatgtg
gcagcaattcactgtgggcacacttttcattatgaatgccttcttcagtggtttcagact
gctcctacgaaaacctgcccgcagtgtaggaaacaggtcagcaccaggcacatcatcagc
aagctgttttttgacattggaggagaggaggaagcggggtctgcagacccagagagcttg
cagaatgagcttgaccgaatgaaggcacagttaagctctaaagagcgagactggcgggaa
aaacagaaggtgattgacggcttaaaggataccgtcaacaagcagaagagagacctggac
aacatacggaaggagatcatggaaaaggagatgatctgtattgccctaagaaaacagatg
gcttatatggagacgcagcagaatgaagttcaggcagcgaaggaggaggtccgcaggctg
aggactaaaatgaaaacctttgaaggcctggatgtgttgctacacggtcagcgagacgaa
gttgattccatgatcacagatatgggcgtcagccaggcagcagtggagcagctctctatt
tattgcatctctctaaagaaagagtatgataatctcaaaggaagcctaaaatcttccaat
gacatgtgtgagaagttgaagagagaagttctctcctctaacaacaagctgcaaaaggct
tccctggaggtgaatcagaccagagaggacatgaagtctctgcagagagatctggccaat
gccgacagagagatttctagtctcaagaaaaaagtcgagtttcttcagaagactctgagc
acaccaacacgcacaaatgaagccctcagcaggcttgtctttgaaagcccggccccactg
gagctgaagcctccccgcctccaccagccgacgcgtggagaggacatcgatctcgatgcg
acctatgacatcactactcctgacgacatttccaagagaccgaccaaagttccttcaaag
aagatgcgcctcgaacaaccaggatcgtctgtttcgaaacacagcgagaaatcatcttcc
ctaagcaagcctcaggacgaagctctggatccttttttgaggaactcccttctcttcaga
aagaagacctttggaagcatgttggaccctcagagaaaggctggagtcgtcagaacagga
tatgatggattaggaggacggactaaattcatccaaccttctcctttagctgagatccgc
cctctgatcaaaactaaaaggaaaaaggtgactcggccgccctctaaacatccaacctgc
ctgactctggacagcttcctggaataa
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