Cyprinodon tularosa (White Sands pupfish): 119790789
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Entry
119790789 CDS
T07496
Name
(RefSeq) histone deacetylase 2
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03082
ATP-dependent chromatin remodeling
ctul03083
Polycomb repressive complex
ctul04110
Cell cycle
ctul04330
Notch signaling pathway
ctul04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119790789
03083 Polycomb repressive complex
119790789
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
119790789
04350 TGF-beta signaling pathway
119790789
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119790789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ctul03036
]
119790789
Enzymes [BR:
ctul01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
119790789
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
119790789
HDAC complexes
Sin3A-HDAC complex
119790789
BRAF-HDAC complex
119790789
REST complex
119790789
SHIP complex
119790789
MiDAC complex
119790789
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
119790789
Heterochromatin formation proteins
Other heterochromatin formation proteins
119790789
Chromatin remodeling factors
NuRD complex
119790789
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
RNA_polI_A34
Motif
Other DBs
NCBI-GeneID:
119790789
NCBI-ProteinID:
XP_038152439
LinkDB
All DBs
Position
Unknown
AA seq
490 aa
AA seq
DB search
MAYTTAGGTKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEVYRPHK
ATADEMTKYHSDDYIKFLRSIRPDNMSEFSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSA
AGSVKLNRQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIH
HGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYE
QIFKPVMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIRGHAKCVEYIRSFNLPLLML
GGGGYTIRNVARCWTYETAVALDTDIPDELPYNDYFEYFGPDFKLHISPSNMTNQNTQEY
TDKIKQRLFENLRMLPHAPGVQMQAIPEDAVPDDTVDEDAEDPDKRISIRAADKRIACDE
EFSDSEDEGQGGRRNTANHKKGAKRPKVDEDKKESEEKKVDVKEEDKTKESSSEKAESKS
TVKTEQTSSA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggcttacactacagcaggcgggacgaagaagaaggtctgctactactatgacggtgac
attgggaactattactacggtcaaggccatcccatgaagccgcatcgcatccggatgact
cacaacctgctcctgaactacggactgtacagaaaaatggaggtttaccgaccacacaaa
gccaccgcagacgagatgacaaagtaccacagcgacgactacatcaagttcctccgatcc
atacggccagacaacatgtccgagttcagcaagcagatgcagcgcttcaatgtgggggag
gactgccccgtgttcgatggcctgtttgagttctgccagctgtctgcgggggggtctgca
gctggatcggtgaagttgaaccgacagcagacggacatcgctgtgaactgggctggaggt
ctccaccacgctaagaagtctgaagcctcaggcttctgctacgtcaacgacatcgtcttg
gctattttggagctgctcaagtaccaccagagggtgctctacattgatatagacatccac
cacggagatggtgtagaggaggccttctacaccacagacagagtcatgaccgtgtccttc
cataaatacggggaatacttcccaggaacaggagacctcagggacatcggagctggaaag
ggcaaatattatgctgtcaacttcccactgcgggacggcatcgatgacgagtcctacgaa
caaatcttcaaacctgtgatggctaaggtgatggagatgtaccagcccagcgccgtggtg
ctccagtgtggcgcagactctctctctggagaccgcctcggctgcttcaacctcaccatc
agaggtcacgctaagtgtgtggagtacataaggtcgttcaacctgccgctgctgatgctg
ggagggggaggttacaccatccgtaacgtggctcgctgctggacctatgagacagctgtg
gctctggatacggacatccctgatgaactgccatacaacgactattttgagtactttgga
cctgacttcaagctgcacatcagcccctccaacatgaccaaccagaacacgcaggagtac
acggacaagatcaagcagcggctctttgagaacctgcggatgcttcctcacgccccgggg
gtccagatgcaggcgatcccagaggacgccgtcccagacgacaccgtggacgaggacgct
gaagaccctgacaaacgaatctccattcgtgctgctgataagaggatagcctgtgatgaa
gagttttctgactctgaggatgaggggcagggggggcggaggaacacagccaatcacaag
aaaggagccaaaaggccaaaggtggacgaggacaagaaggagagcgaggagaagaaagtc
gacgttaaagaagaggacaagacgaaagagagcagctcagaaaaggctgaaagcaaaagc
accgtgaagaccgagcagaccagcagcgcctga
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