Cyprinodon tularosa (White Sands pupfish): 119790834
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Entry
119790834 CDS
T07496
Symbol
frmpd1b
Name
(RefSeq) FERM and PDZ domain-containing protein 1 isoform X1
KO
K23954
FERM and PDZ domain-containing protein 1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ctul04990
]
119790834 (frmpd1b)
Domain-containing proteins not elsewhere classified [BR:
ctul04990
]
Other domain-containing proteins
FERM domain-containing proteins
119790834 (frmpd1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FERM_M
RA_2
PDZ
FERM_f0
PDZ_6
FERM_C_FAK1
PDZ_2
Protamine-3
Motif
Other DBs
NCBI-GeneID:
119790834
NCBI-ProteinID:
XP_038152473
LinkDB
All DBs
Position
Unknown
AA seq
1704 aa
AA seq
DB search
MEENERCRSRSPARRTSRVQQVVGTIIRRTRESLSRERLLGDGRSQRSNSLSSQSFQAKL
TLQITRDPVLDRSTGHGFTLTTDAPLLVRDVAPGSPADGILYPGDQVLQINEKVMEDLSA
EQVENILRDLEDCINVTILRHMTNPKSSIMSAEKRARLRSNPVKVRFAEEVVVNGHTQGN
SLLFLPNVLKVYLENGQTKAFKFDNTTTVKDIVLTLKEKLSMRVIEHFGLVLEQQYSIAK
LLLLHEDELIQKVVQKKDSHDYRCLFRVCFIPRDPSDMLQEDPLAFEYLFLQSVGDVLQE
RFAVEMKCNTALRLAALHMHERLDSCGQTRASIKSITKEFGLDSFISPTLLSNMREKDLR
KAISYHLKKIQSLLEPRQKVISATQARLAYLTQLGELISYGGRSYTATMMLQDREVLVSL
LVGAKYGLSQVINHKLNMISTLVEFSSISRVELLSESEKVSLLRISLHDMKPFALLMDSV
AAKDLGCLLGGYCKLLVDPSVNVFRLGRPKVRVHRIPAEEGVCGRFAVIEGVCYESLSSY
VSRCCSDSDDSTDDDDPMDSQSYKGSDHTSTDWEERRREEEEKRKDEERKEREEHEGKQE
VKIIVTTEGKENESEEEEGATGSGLRKFNVVDEEMNLETSWYHTDLRVTSSFSSLSSSSL
STALEESSAAAKAPSRLDALRGSSPCEDPSNLSVHHPYLLDPKRQVPLRPTNLNYRGNDN
SFLCFAELSKDDFLPSPAGATSEDDDEEEEEEEEGDLGIHQLRRISKIPSSRDLRMIDST
PFERLPIKRKKKIPPKVPLRTSSIPGNKSAQAEHRLSKDEDGLFLTPSPNPKPALLLKDN
VSESEDEFFDAQERFTPPVPDLSDAELADRKNANRLSGTWNSLQSVSRKEPPSPLANKPR
SPKIKKESELLKDSTNQLFQQPSSPSKPSQKSEAKVKPPLAPKPQLPPKPQMIPPKSPQH
GRSYAQCNGDAPGRLSSELLEMEPDTMEFKSVTLGGLPVSSSIITAVRCYKQPVTNTTPQ
NEENTIKKEILQKNKNLVCENGLQGIPNDNKIIEDKKETEKVDENVNGPNILTKGPPSSH
SVPRSNSGTKLAVPPPVPPKPTCSSSFHPLSLPASSPVSPTDPNKGIFKDTVSTPNGIHP
WSSRNGSIQSGPRRVSLSHESLSPKNADAPLTITTSPSSVDCKGVGGLESKEPGRSGSGS
DLRTSSSSLGGRLPASALRGRIQSLPWYMTRSQEILGNLDYPSTSSINGDTSGFGSGLSV
ASGLSDLNKTPVKDTDTVASKSGSKGSILDDGAEVVIATIRQAPEVSSHMKKASGTNGSH
PNLSFRDISPHSGCVSSEQPQSRTHSAVGLGGVTSMQIGGDSPTSSGADTTPPQQHRESC
GCHTVYANCFSGDTEEGVSFDEELTVYEFSRRIRPKPAQASSPTTPAPKPNILSLLKDNP
RPLSTFSTASSELSPLVSCPVSPTVSLSGRLRSLSNKNYGGLRGGFASLREDIDQLLLVL
DRDGLDQPQQHSKLETTDLNHNGTQDNMASGKSCTGVSPVIMTEPEKSLLQAEARRLASG
CQRATRVGWAPDEALRSLTTSFSALVQLSAACLKTNPCPGCEVCNKARLVDKDEDDDGQQ
PMEKLKEIVGLYREFVGAVETAGTGGVNGGRNVGSGQSQGEEDGVRLLAKRCTLLISSVF
ALTQLFRSRTLETTDTPGRVPLNF
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaatgagcgatgtaggagcaggtctccggctcggaggaccagtcgggtgcag
caggtggtgggaaccataatacggcgtactcgggagtccctgagcagggaacgtctgctg
ggcgatggaaggtcacagcgctctaacagtctgtccagtcagagcttccaggccaaactg
acgctgcagatcaccagagaccctgtcctggaccgcagcaccggacatggcttcactctc
accacagacgcccccctgctggtcagggatgttgctccaggaagccctgcagatgggatc
ctgtacccaggggaccaggtgctgcagataaatgaaaaagtgatggaggatttgagtgca
gagcaggtggaaaacatcttgagggacctggaggattgcatcaatgtgactattctgcgg
cacatgacaaatcccaagtcatccattatgtcagctgagaagagagctcgtctgaggagt
aatccagttaaagtgcgctttgcagaggaggtggtagtcaatggacacactcagggaaac
tctcttctcttccttcccaatgttttaaaagtctatctagagaatggacagaccaaggcc
tttaagtttgacaatacaaccactgtcaaggacattgttctgacactaaaggaaaaactc
tccatgcgagtgattgagcactttggtctggtactagagcagcagtatagcatcgccaaa
ctattgctactgcatgaagatgagctcattcaaaaggtggtgcagaaaaaagactcgcat
gattacagatgcctgttcagggtttgtttcattcccagagacccctcggacatgctacaa
gaagaccccttggcctttgagtatctctttttgcagagcgttggagatgtgctacaggaa
cgtttcgccgtggagatgaagtgcaacacggcgctacgcctcgctgcactgcacatgcat
gagagacttgatagctgtggacaaacccgggcctctatcaagagcattacgaaggagttt
ggtctggacagctttatctcacccacactgctgagcaacatgagggagaaggacctaagg
aaagcaatcagctaccacctcaaaaagatccagtccctgcttgagccgcggcagaaggtc
atatctgctactcaggctcgattggcctaccttactcagcttggagaacttatttcctat
ggtggacgctcttacacagctacaatgatgcttcaggacagggaagtgctggtcagcctg
ctggtaggagccaaatatggattgagtcaagtcattaaccacaagctcaacatgatatcc
accttggttgagttcagcagcatcagccgagtggagctgctatccgagtcagaaaaagtc
agcctgctgcgcatttcactgcatgatatgaagccatttgccttactgatggattctgtg
gcagccaaagacttagggtgtttgctgggaggctactgcaaactcctggtggatccaagt
gttaatgtcttccgtctggggcgcccgaaagtcagggtgcaccggattcctgctgaagaa
ggtgtgtgtgggaggttcgccgtaatagagggcgtgtgctatgaatccctatcaagttat
gtgtctcgctgctgcagtgattcagatgactcaacagatgacgatgaccctatggattcc
cagagttacaaaggctcagatcacacaagcacagactgggaagaaaggagaagagaggag
gaggaaaagaggaaagatgaagaaagaaaagagagggaagaacacgaaggcaaacaggaa
gtaaaaataatagttacaacagaaggcaaggaaaatgaaagcgaagaggaagaaggtgca
acaggaagtggtcttcgtaaatttaatgttgttgatgaagaaatgaacctagagaccagc
tggtaccacactgacctaagagtcactagtagcttctcaagcttgtccagcagctccttg
agcactgccctggaggaaagcagtgctgcagccaaagccccttctcgcttagacgctctt
cgcgggtcaagcccatgcgaagatccttcaaacttgagcgtccaccacccctacctactt
gatccaaagcgtcaagtgccccttcgacccacaaatctgaactaccgtggcaatgataac
tctttcctctgctttgctgaactctccaaggatgatttcttgccaagtccagcaggcgct
acaagtgaagatgatgatgaggaggaggaggaggaggaagagggagacctgggcatccat
caactcagacgcatttctaagattcctagttcaagggatctgagaatgattgacagcaca
ccttttgaaagattgcccattaaaagaaagaaaaagattccccccaaagttccattaaga
acgagttctattcctggtaataaatctgcacaagccgagcatcgcttgtctaaagatgag
gacggcctttttcttactccctcacccaacccaaaaccagctcttttgttaaaggacaat
gtctcagaatcagaagatgagttttttgacgcacaggagagatttactccaccagttcca
gatctgtcagatgctgagctggctgatcggaaaaatgctaatcgcttgagtggaacctgg
aatagtcttcaatctgtctcaagaaaagaaccaccatccccccttgctaataaacctcga
tcccctaaaataaaaaaggaatctgagttgctaaaagactctacaaatcaactttttcaa
caaccatccagtccctcaaagccgtctcagaaatctgaagctaaagtgaaaccaccactg
gcacctaaaccccaactacctcccaaacctcagatgatccctcccaagtcaccccaacat
ggacgatcatatgcccagtgcaacggggatgctcctggacgtttgtcttctgaacttttg
gaaatggagccagatacaatggagttcaagtctgtcacattgggtggattgcctgtctcc
tcgtcaattattacagcagtgagatgttacaaacagcctgtaaccaacacaacaccacaa
aatgaggaaaacactattaaaaaggaaatcttacagaaaaacaaaaatcttgtgtgtgag
aatgggttacagggtattcctaatgacaataaaattattgaagataaaaaagaaacagaa
aaggttgatgagaacgtcaatggacctaacattttaacgaaaggtccacccagctcccat
tctgtcccacgctctaattcagggacaaagcttgctgttccccctccagttccccccaaa
cctacatgttctagcagttttcatcctttatcgctacctgctagctcccctgtctctcct
actgatccaaataaagggatttttaaggatacagtcagtacaccaaatggaatccaccct
tggagtagtcgcaatggcagcatccagtcagggcctaggagggtttctctgagccatgag
agcctatcacctaaaaatgcagatgcaccactcacaattaccacctcaccctcctctgtg
gattgtaaaggtgttgggggccttgaaagcaaagagcctggtcgatctggttcaggatcc
gatctgagaactagctcttctagtttgggaggaagactaccagcttctgctctgagagga
aggatccagtctttgccctggtacatgactcgttcccaagagattcttggaaatttggac
tatccctcaacaagttctatcaatggagacacctctggttttggctctggtttgtctgtt
gcaagtggcctatcagacttaaataaaacccctgtcaaggacacggatacagttgcatca
aaatcaggaagtaaaggaagcatcttagatgatggagcagaggttgtcatcgcaaccatc
agacaggctccagaggtaagttcacatatgaaaaaggcaagtggaacaaatggctcacac
ccaaatctgagtttcagagatataagtccacatagtggctgtgtttcttcagagcagcca
cagtcacgaactcactcagctgtggggctgggtggtgtaacaagcatgcagattggaggc
gactccccaacctcctctggagcagacactactcctccacagcaacatcgggagtcttgt
ggttgtcacaccgtttatgccaactgttttagtggagacactgaggaaggggtgagcttt
gatgaggaacttactgtttatgaattctctcgccgtatacgccccaaacctgctcaagca
tcttctccaaccacacctgctccaaaacccaacattctctcacttttgaaggacaaccct
cgaccactgtctaccttctccactgcatcctctgaactgagtccactcgtttcgtgtcca
gtttcccctacagtttcactcagtggtcgtctgcgttccctttctaacaagaactatggg
gggctaaggggtggttttgcctctctgcgtgaagacatagatcaacttcttctagtatta
gacagggacgggcttgaccagcctcagcaacactcaaaattggagaccacagacctaaat
cacaatggaacacaagacaatatggcttcaggtaaaagttgcacaggggtaagtcctgtc
atcatgacagagcctgaaaaaagtcttctccaggcagaggctcgtcgactagcatctgga
tgccagcgagcgacgcgtgttggttgggctccggatgaggctctgcgttctttaactact
agttttagcgccctggttcagctgtcagctgcctgcctgaaaacaaacccctgtcctggt
tgtgaggtctgcaataaagcaagactagttgacaaagatgaggacgatgatggccagcag
cctatggagaagttgaaggagatagttggtctgtatagagagtttgtcggggcggttgaa
acagctgggactggcggtgttaatggtggtagaaatgtggggtctggacagagtcaaggg
gaggaagatggcgtaaggctgctagccaaacgctgcactctgctcatctcatccgtattc
gcgctcacacaacttttccggtcacgcacactggaaaccacggacacacctggccgtgta
cctctcaatttttga
DBGET
integrated database retrieval system
