Cyprinodon tularosa (White Sands pupfish): 119790859
Help
Entry
119790859 CDS
T07496
Symbol
thoc2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03013
Nucleocytoplasmic transport
ctul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119790859 (thoc2)
09122 Translation
03013 Nucleocytoplasmic transport
119790859 (thoc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctul03019
]
119790859 (thoc2)
03041 Spliceosome [BR:
ctul03041
]
119790859 (thoc2)
Messenger RNA biogenesis [BR:
ctul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
119790859 (thoc2)
Spliceosome [BR:
ctul03041
]
Complex C
Other components
EJC/TREX
119790859 (thoc2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
119790859 (thoc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
119790859
NCBI-ProteinID:
XP_038152523
LinkDB
All DBs
Position
Unknown
AA seq
1553 aa
AA seq
DB search
MATLILPGEWIKNWEKSGKHEFVQLCKELIEKTDHGKDVKDFQAALYEICSQVVQGNLKI
DLVSTVLGEMMELREDLPSILADVFCILDLETGALEEKNKRDQYTHLVGACLSYVPEAIL
KERLDPETLESLGLIKQAHQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLISELGQDL
SGNITSNLVLESIKSLIGCFNLDPNRVLDIILEVYESRSDQDEFFLSLIKSYMCEPVTLC
HILGFKFKFYQEPNEETPKSLYHIAAALLHHNLIELEDLYVHLMPVDSTIVEEHKREISE
AKQVARKLVTVVLPSEKTEDKEKDKEKEEEKNDKPPDNQKLGLLEALLRIGDWHHAQSIM
DQMPSFYAASHKTIALPLCRLVHLTVEPLYRRAGVPKGAKGCAMQPLNNTRAPQPTETFE
DLRRDTFSMLCYLGPHLSHDPILFAKIIRLGKAFMKEYQTDSRTEVKDKMDVLLSCFLSI
ADQVLLPSLSVMECNACMSEELWGLFKLFPYQHRYRLYGQWKNETYSGHPLLVKVKAQTV
ERAKYIMKRLTKENVKQSGRQIGKLSHSNPTIVFDYMLSQIQWYDNLIVPVVDSLKFLTS
LNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKYPIELAGLLQYVTN
QLKAGKSFDLLILKEVLQKMAGIEITDEMTSEQLEAMTGGEQLKAEGGYFGQIRNTKKSS
QRLKDALLDHELALPLCLLMAQQRNGVVFLEGGEKHLKLVGHLYDQCHDTLLQFGGFLAS
NLSTEDYIKRVPSIDILCNQFHTPHDAAFLLSRPMYAHQILSKYDELKKAEKGNRQQQKV
HKYVAACEQVMAPVHEAVVSLHPARVWDDLRPQFYATFWSLTMYDLAVPHAAYDREVNKL
KVQITAIEDNPEIPMNKKKKEKERCTALQEKLQEEEKKQMEHVQRVLHRLKLEKDSWLMT
KSTKNETITKFLQLCLFPRCIFSSIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSAIIY
TVASCTENESHRYGRFLCCMLETVTRWHSDRAIYEKECVNYPGFLTIFRAAGIDGGNKAD
QLDYENFRHVVHKWHYMLTKASVHCLETGDYTHIRNILIVLTKILPCYPKVLNLGQALEA
RVHKICLEEKDKRPDLYALAMGYSGRLKSQKVHMVPENEFHHKDQPARSATPASQQNGPG
STGKPAANASKTEEGLSEDGDRGKDKSQGTTKPVNKANSTAGKVTTSNGNGALNSTKVVK
DDKERSVKEKKEKKEKTPGSTPENRREKQRDERAGKEERVAREGKEKTPKADREKIKPEE
KVMKDDKAKAGNGESLEPARERDAVKESKSKEKGDRITATTTLKSPNPRSESAESERDHK
RRKLDSHSSPSHSSSVKDSSNELKESASKQHHINFNSVARSKSREREVEKNDTENSQGRS
KEKKEEKERKERKRDHNINDREASQESKRRKDENGTNSARNSQSPSCDSSLSPEKEKSKR
SKSSSKEKAESVKQERTSGGKKESRHDKEKKEKRESGAGKEEKKHHKSADKHR
NT seq
4662 nt
NT seq
+upstream
nt +downstream
nt
atggcgacactcatcctccctggcgaatggatcaaaaactgggaaaaatcaggaaaacac
gagtttgtgcaactctgcaaagagctaatagagaaaacagatcatggaaaagatgttaaa
gattttcaggctgctctctatgagatctgttcacaggttgtccagggtaacctgaagatt
gatctggtctctactgtcctcggggaaatgatggaactccgagaggatttgccatcaatt
ttagcagatgtgttctgtatactagatttagaaactggtgcactagaagagaagaacaaa
cgggaccaatatactcatttagtaggagcctgtttgtcttatgtaccagaggccatcctg
aaggaacgtctggacccagaaaccctggaatcactcgggctgataaaacaagctcatcag
tttaatcagaagattgtaaaaatcaagactaagcttttttacaaacagcagaagtttaac
ctgctgagggaggagaacgagggctacgccaagctgatcagcgagctcggccaggacctg
tcggggaatatcaccagcaaccttgtccttgagagtataaagtccctcataggctgcttc
aacctagaccccaatcgtgttttggacatcatcttggaggtgtacgagagccgctctgac
caggatgagttctttctgtccctcatcaagtcctacatgtgtgagccagtcaccctatgc
cacattctgggctttaagttcaagttctaccaggagcccaatgaggaaaccccaaagtca
ctttatcacattgctgctgctctcctgcaccataaccttatagagctggaggatctctat
gtgcatctcatgccagtagactccaccatagtggaggaacacaaacgagagatttcagaa
gccaagcaagtcgcacgcaagctggttacggtggttctgccgtcggagaaaactgaagac
aaggagaaggataaagaaaaggaagaggagaagaatgacaagccacctgataaccagaag
ctcggccttttggaggcactactcaggattggagattggcaccacgcccagagtattatg
gaccagatgccttctttttacgctgcttctcacaagaccatagcgctgccgctttgccga
cttgtacacctgactgtagagcctctttatagaagagctggcgtcccaaaaggagcaaag
ggctgtgcgatgcaacccctgaacaacacgcgggctcctcagcccacagagaccttcgag
gatcttcgtagagacacgttcagcatgctctgctacctgggccctcacctctcccacgat
cccatcctctttgccaagatcattcgtttgggcaaagcctttatgaaagagtatcaaact
gatagcagaactgaagtgaaagataagatggatgtgttgttgagctgtttcctaagcatc
gccgatcaggtgctgctgccctctctttctgtaatggagtgcaacgcctgcatgtctgag
gagctctggggactgtttaaactctttccctaccagcacaggtaccggctctatggacag
tggaagaatgagacgtattctggacatccactgttggttaaagtgaaagcccagactgtg
gaaagagccaaatacattatgaaacgcttgaccaaagagaacgtaaaacagtctgggagg
cagattggcaaactgagccacagcaatcccaccatcgtcttcgattatatgttgtctcag
atccagtggtatgacaacctgatcgttccagtggtggactcgttaaaattcctcacgtct
ctcaactacgacgtcctggcctattgcattatcgaagctctggccaatccggagaaggag
aagatgaaacatgacgacactactatctcctcatggctccagagtttggcgagtctgtgt
ggagccgtgttcagaaaatacccgattgagttggccggcctcctgcagtacgtcaccaac
cagctaaaggctgggaaaagttttgacctgctgatcctgaaggaggtgctgcagaaaatg
gctggcatcgagatcacagacgagatgacctcagagcagttggaggccatgacgggaggg
gagcagctaaaagctgagggtggatacttcggccagatcaggaacacgaaaaaatcctcc
cagcgcctgaaggacgccctgctagatcatgagctggcgctgccgctgtgtttactcatg
gcccaacagcgaaacggagtcgttttcctggagggcggagagaagcatctgaaactcgtg
gggcatctctatgaccagtgtcacgacacgctgctgcagtttggcggctttttggcctcc
aacctcagcacagaagactacatcaagcgagttccctccatcgacatcctgtgcaaccag
ttccacaccccacatgacgccgccttcctcctgtcccgccccatgtacgcacatcagatt
ttgtcgaaatacgacgagctaaagaaagccgaaaaaggaaaccggcagcagcagaaggtc
cacaagtacgtggcagcgtgtgagcaggtgatggcgccggtgcacgaggctgtggtctcc
ctccatccggccagggtgtgggatgacctgcggcctcagttctacgctaccttctggtcc
ctcaccatgtacgatctggccgtgccgcacgctgcctatgaccgggaggtgaacaagctg
aaggtgcagatcacagccatcgaggacaaccctgagataccgatgaacaagaagaagaag
gagaaggaacgctgcactgcgctgcaggaaaagctacaggaggaagagaagaagcagatg
gaacacgtccaaagagttctgcaccgtctgaaacttgaaaaggacagctggttgatgacc
aaatccacaaagaacgagaccataaccaagttcctgcaactctgcctgttccctcgctgc
atcttctcctccatcgacgccgtgtactgtgcccgctttgtcgagctggtccaccagcag
aaaacaccaaacttctgcactctcctctgctatgaccgggtgttctctgccatcatttac
accgtggccagctgcacggagaacgagtcccaccgctacgggcgcttcctctgctgcatg
ttggaaacagtgacccgatggcacagcgaccgcgccatctatgagaaggagtgtgtgaat
taccccggcttcctgaccatcttcagagcagcaggcattgacggagggaacaaagcagat
cagctggattacgagaacttcagacatgtggtccataaatggcactacatgctgactaaa
gcatcggtccactgcctggaaacaggggattacacccacatccgaaacattctgatcgtg
ctgaccaagatcctaccctgctacccaaaggtcctgaacctgggccaagcgctggaggcc
cgcgtccacaagatctgcctggaagagaaggacaagaggccagacctctatgccttagcg
atgggttactcaggtcggttgaaaagccagaaggtgcacatggtcccagagaacgagttc
caccacaaggaccagccagcccgcagcgccacaccggcgagtcagcagaacgggcctgga
agcaccggcaaacccgccgccaacgccagcaagactgaggaggggttgtcagaggatggg
gatcggggcaaagataaatctcagggtaccacgaagccggtgaacaaagccaacagtaca
gcaggcaaagtgaccaccagcaacggaaacggtgctctcaacagcaccaaagttgtcaaa
gatgacaaagagcgtagcgtgaaggagaaaaaagagaagaaggaaaagacaccaggtagc
actccagagaaccgcagagaaaagcagagagacgaaagagcaggaaaggaggagcgagtg
gcacgcgagggtaaggagaagaccccgaaagcagacagggagaaaatcaagccggaggag
aaggtcatgaaagacgacaaggccaaggccggaaacggggagtccctggaaccagccaga
gagcgcgacgccgtcaaggagtccaaaagcaaggagaaaggagacaggatcactgcgacc
acgacccttaagtcaccaaacccgagatcggagtcggctgaatctgagagggatcacaaa
aggcgaaagctcgacagtcactcatccccgtcccactcctcatctgttaaggacagtagc
aacgaactcaaggagtctgcatccaagcagcaccacatcaactttaattcagttgcccgg
tccaagagcagagagagggaagtggagaagaacgacacagagaactcacaaggccgatcc
aaagagaagaaggaggaaaaggagcggaaggaaaggaaacgagatcacaacatcaacgac
cgcgaggcgagccaagagtccaaacggagaaaggacgagaacggcaccaattccgccaga
aacagccagagtccttcctgtgactcttctctgtccccagagaaagagaagagcaaaaga
tccaaatcctccagcaaggagaaggcggagtctgtgaaacaagagagaacctctggagga
aagaaggagtccagacatgataaagagaagaaggagaagagggagagcggcgcagggaag
gaggagaaaaaacaccataaatcggctgacaagcacagataa
DBGET
integrated database retrieval system
