Cyprinodon tularosa (White Sands pupfish): 119790915
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Entry
119790915 CDS
T07496
Symbol
ddx56
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ctul03009
]
119790915 (ddx56)
Enzymes [BR:
ctul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119790915 (ddx56)
Ribosome biogenesis [BR:
ctul03009
]
Eukaryotic type
Pre-60S particles
Helicases
119790915 (ddx56)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
119790915
NCBI-ProteinID:
XP_038152611
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MAAERLQFHEMGLDDRLLKAVADLGWSQPTLIQEKAIPLALEGKDLLARARTGSGKTAAY
AIPIIQRILASKQSVREQDVRALILVPTKELGQQVQSMIRQLTSCCSRDVRVADISGKAD
VSTQRPILMEKPDVVVGTPSRVLAHLKAQNLVLHSSLEMLVVDEADLVFSFGFESDLKNL
LCHLPKIYQSFLMSATFNEDVQALKELLLHNPVTLKLQGSQLPDSSQLQQYTIKCEEEDK
FLLIYTLLKLQLVQGKTLLFVGAVDRSYRLKLFLEQFAIPACVLNSELPVQSRCHIISQF
NQGFYDIIIASDEQTLVQPAVSSSGKEKKQKSSEKGAKAKDKEYGVSRGVDFQNVANVIN
FDFPTSVDSYIHRVGRTARADNPGTALSFVAHTELSALEEVEESLCGDKAESALKPYEFR
MEEIEGFRYRCRDAMRAVTKQAVREARLKEIKQELLNSEKLKTYFEDNPRDLQLLRHDKD
LHPAVIKPHMKNIPDYLIPETLRGVVNPLSSRRRKRRIKPAAEGIVKSSFKKNVPGRNPL
KSFRFTGSRNKKANGAKS
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggagaggcttcagtttcatgaaatgggattagacgaccgccttttaaaggcg
gtggccgatctgggttggtctcagcccaccctcatccaggagaaggccattcctctggca
ctggaagggaaggaccttctggctcgagcacggaccggatctgggaagacggcggcgtac
gctatacccatcatacagcgcatcctggcatccaaacagagtgtccgtgagcaggatgtt
cgagctctcatcctggtaccaaccaaagagctcggccagcaggttcagagcatgataaga
cagctgacgtcgtgctgttcaagagacgtccgtgtggccgacatctccggcaaagccgac
gtatcgacgcagagacccattctgatggagaagccagacgtggttgtggggacgccgtcc
cgcgttctcgcccacctcaaagcccagaacctggtcctccactcctccctggagatgctg
gtggtagacgaggccgacctcgtcttctccttcggcttcgagtcggatctgaagaacttg
ttgtgccatttgccaaagatctatcagtcgttcctcatgtcggccaccttcaacgaggac
gtccaggccttaaaggagctgctgcttcataacccggtgaccctgaagctccagggctct
cagctcccagacagcagccagctgcagcagtacaccatcaaatgtgaggaggaggacaag
ttcctgctgatttacacgctgctgaagctgcagctggttcaggggaaaacgctgctgttt
gtcggagccgtggaccggagctacaggctcaaactgttcctggaacagttcgccatcccc
gcctgcgtcctgaactcggagctgccggtccagtccaggtgccacatcatcagccagttt
aaccagggcttctatgacatcatcatcgcttcggatgagcagacgttggttcaacctgct
gtgtcgtcttcagggaaagaaaagaagcaaaagagctcagagaaaggagccaaggccaaa
gataaggagtacggcgtctccaggggggtggacttccaaaacgtggccaacgtcatcaac
tttgatttccccacatcggtggattcctacattcatcgagtcggaagaacggcgagagct
gacaacccgggcaccgccctgtccttcgtggctcacacagagctcagcgctctggaggag
gtggaggagtccctctgtggagataaagctgagtctgcgctcaaaccctacgagttcagg
atggaggagatcgaaggcttcaggtacaggtgcagggatgcaatgcgagcggtgaccaag
caggctgtgagggaggccagactgaaggagatcaaacaggagctgctcaactccgagaaa
ctcaagacgtactttgaggacaaccccagagatctgcagctgctgagacacgacaaagac
cttcatcctgctgtcatcaagcctcacatgaagaacatccccgactatctgattccagag
acgctgagaggcgtggtgaacccgctgtccagcaggagaagaaagaggaggataaaacca
gcagcagaggggatcgtgaaaagcagcttcaagaaaaacgtcccaggaaggaatccgctg
aagagtttccgattcacgggatcaagaaataagaaagccaatggtgctaaatcgtag
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