Cyprinodon tularosa (White Sands pupfish): 119790941
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Entry
119790941 CDS
T07496
Name
(RefSeq) LOW QUALITY PROTEIN: Down syndrome cell adhesion molecule-like protein 1 homolog
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ctul04515
]
119790941
Cell adhesion molecules [BR:
ctul04515
]
Immunoglobulin superfamily
Other
119790941
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
Ig_5
Ig_6
C2-set_3
Sp38
Interfer-bind
Receptor_2B4
ChitinaseA_N
DUF1461
DUF6034
Motif
Other DBs
NCBI-GeneID:
119790941
NCBI-ProteinID:
XP_038152651
LinkDB
All DBs
Position
Unknown
AA seq
2100 aa
AA seq
DB search
MGGAEALLVSPPRLAGQQGWKHLPGAQXQHGEPPGQRNAPHTNQDYQQFLKNIPALYGMW
LVTLLLLYSLQEVHSEDASSTRLYFVNASLQRVTYSSSVGVSLPCPAGGTPSAILRWYLA
TGDDIYDVPHIRHVHANGTLQLYPFSPSAYNSYIHDNDYFCTAENQAGKIRSPNIRIKAV
FREPYTVRVADQRSMRGNVAVFKCLIPAAVQEYVSVVSWERDTVSIVPGNRFSLTSFGAL
YISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPSESSPTILDSFQAGEVYAGQS
IELPCIAGGYPSPTVRWLKDGRSLPSDARWTRRLTGLTISDLRQEDSGSYACEVTNSFGS
KEVSGQLHVIDPLRVTLSPKNMKTGISSTLFFTCTVEGSPEYTITWFRNTELIVPDQHIS
MQGQHNDTLQIVAAQKFHSGAYQCFASRKGHTAQDFSIILLEDGTPRIVSSFSERVVNPG
EPFSLMCAAKGAPPPSITWTLDEEAVVRDSTYKTSQYTLSDGLTVSHVNVSSPLIRHGGV
YRCVARNSAGSAEYQARINVRGQPQIRPMRDITAVAGRNTYITCRVIGYPYYSIKWLKDG
MQLPDNHRQVVFENGTLRLTDVQKGADEGTYLCSVLIQPQVSINQTVHVTVKVPPLIQPF
DIPSTSVGKLMYIACVVSSGDMPIRITWHKDGQLIVPGSASGVAIETKEFMSSLQISKVT
LKHNGNYTCIASNAAANVSWERQLIVTVPPRFVVQPNNQDCIYGKAGVLNCSVEGYPPPK
VMWKHAKGVGNPQQYHPVPLTGRIQIMSNGSLLIRHVLEDDRGYYLCQASNGVGSDISKS
MILTVKIPAMITSHPNTTMARKGQTKELNCTARGEQPIIIRWERGDTVIDAERNPRYSIT
INKKGDEVISTLKLNPAERGDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPELEVREVKD
RSMNLRWIQRFDGNSIITSYDIEYKNKSDSWDHMYTTRNISPTNNQANIVELHPACVYSI
RMYSYNKIGRSLPSKELTISTEEAPPDGPPMDVVLQPMTSQSIRVTWRAPKKELQNGVIR
GYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSTE
INATTLEDVPSEPPQNVRAISVTSDEAVITWSEPPRMTLHGVLKGYRVVFWSLFPDGEWG
EMQNITTTREQVELRGLEKFTNYSVQVLAYTQAGDGVRSNVLYIQTREDLPGPPAGIKAV
PSSPSSVVVSWLPPLKPNGVIRKYTIYCSSPGSGQPAPSEYEANPEMLFYRITHLSRGKQ
YHIWSAAVTTAGRGNISAKVTVEPAGKVPAKILSFGGTVTTPWMKEVRLPCSSVGEPAPT
IKWTKDSEDSTLPVTADSQRQILSNGTLVLRSVKAEDSGYYTCTATNTLGFDTIIVNLVV
QVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDNTEEWRDVFISSSERSF
RLDNLRCGTWYKVKLAAKNSVGSGRISEIIEAKTHGREPVFNKDQPLLTHINSTHAGLNL
QGWTSGGCPITDLMLDFRPKGTWAWQSLKANSTNQLFLSELREATWYELKMKACNSAGCG
NQTSQFATTDYDGSTIPPIKSARGEGDDVKKLFSIGSPVILVTLGVALLFIIRKKRKEKR
LKRLRDAKSLAEMLISKNNRSIDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQIGEDKA
AVPVTDTEFSQSVNPQNFCTGVALHHQALIQNSGPLIDMSDIRPGTNPVSRKSIKSAHSS
RNRYSSQWTLSRPSQSTASARTLTSDWRTMGSHGITATESDSYSASLSQDTDKGRNSMVS
TESASSTYEELARAYEHAKLEEHLQHAKFTITECFISDSSSDQMTTGTNDPADSMTSLST
PSEPGICRFTASPPKPQDYDRGKNVAVPIPHRANKSEFCNLPLYMKSDPFFRKQGDSLHD
PCPAVPPREASIRSLTQRAYHTQGRHKTLDSAKQQALTLVHSGLGSLGASSGTSTLPQRT
LTMPSSSNAATASTSSTSSNPAGSNKVGGSRDSLLESSSSALGRLQKQSVGAYSKSYTLV
NT seq
6303 nt
NT seq
+upstream
nt +downstream
nt
atgggcggggctgaggcgcttctcgtttcccctccacgcttagcggggcagcagggctgg
aaacacctcccgggagctcagntccagcacggagagccgcctggccaaaggaacgcgcct
cacactaaccaggattaccaacaattcctgaaaaatatacctgctctttatggcatgtgg
cttgtaactttactcctgttgtactctctccaagaagtacacagtgaggatgctagctct
accaggctctactttgtaaacgcctccctgcagagggtaacctactccagctcagtgggg
gtgtccctgccctgtcctgcagggggcacccccagcgccatactgcgctggtacctggcc
actggtgacgacatctacgacgtgccccacattcgccacgtgcacgccaatggcaccctc
cagctgtacccattctcgccctcggcctacaacagttacatccacgacaacgactacttc
tgcaccgccgagaaccaggcgggcaagatacgcagcccgaacatccgcatcaaagctgtt
ttcagggaaccctacactgtgcgggtggccgaccagcgctcaatgcggggcaacgtagca
gtgttcaagtgcctcatccctgctgccgtgcaggagtacgtcagtgtcgtgtcatgggaa
agagacaccgtttccattgttccaggtaaccgcttctctctgacctcctttggagctctt
tacatctctgatgttcagaaagaagacgccctctccacataccgctgcatcaccaagcat
aagtacagcggtgaaacacggcaaagcaacggggccaggctttcagtaatggaccctagc
gagtcctcgcccaccatcttggacagtttccaagccggggaggtgtacgcgggccagagc
atcgagctcccctgcatagcgggcggctacccaagcccaaccgtgcgctggctgaaagat
ggccgatctctgccctcggacgcccgctggactcggcgcttgaccgggctgaccatcagc
gaccttaggcaggaggacagcggcagctacgcctgcgaggtcaccaacagttttggctca
aaggaggtgtctggacagcttcacgttatagatccactgcgagtgacgctctctccaaag
aacatgaaaaccggcatcagcagcacactgttcttcacctgcaccgtggagggttctcca
gaatacaccatcacctggttcaggaataccgaactcattgttcccgaccagcacatttcc
atgcagggacaacacaacgacacgcttcagatcgtggcagcacagaagtttcactccgga
gcataccagtgcttcgcttccagaaaaggccacacagctcaggatttttccataattctc
ttagaggacggtactcctcgtattgtgtcttccttcagcgagcgggtggttaacccgggt
gagcctttctccctcatgtgtgctgccaaaggagccccgccgccctcaatcacttggact
ttggatgaggaggccgtggttcgagattccacgtacaagaccagccaatacaccctgtca
gatggcctgaccgtgtctcacgtcaacgtcagcagtccgcttattcgacatgggggagtg
tatcgttgcgtcgcacgcaactcggccggtagcgccgagtaccaagcgcgcataaacgta
agaggtcagcctcaaatcagacccatgagagacatcacagcagtggcaggcagaaacacg
tatataacgtgccgcgtgatcgggtacccatactactcgatcaagtggctgaaagacggc
atgcagctgcctgataatcaccgtcaagtggtgtttgagaacggcaccctgaggctgacg
gacgtgcagaagggcgccgacgaagggacatacctctgtagcgttttgatccagccccag
gtgtcaatcaaccaaaccgtccatgtaacggttaaagtgccgccgctcatccagcccttc
gacatcccctctacctcagtggggaagctcatgtacatcgcctgcgtggtttcatccggg
gacatgcccatacgcatcacctggcacaaagacggccagctcatagtgccaggctccgcc
tctggcgtcgcaatagaaaccaaagagttcatgagctccctgcagatctccaaggtgaca
ctgaagcacaacgggaactacacctgcatcgccagcaacgccgcagccaacgtcagctgg
gagagacagctgattgtcaccgtgccgccccggtttgtggttcaacccaacaaccaggac
tgcatttacggaaaagctggagttctgaactgctcagtggagggttatccgcctccgaaa
gtcatgtggaaacacgccaaaggtgttggaaatccacagcagtatcaccccgtccccctc
accggccgcatccagatcatgtcgaacggctccctgctcatccgacacgtccttgaggat
gaccgaggctactacctctgtcaggcctccaacggcgttggctcagacatcagtaaaagc
atgatcctgactgtaaagattcccgccatgatcaccagccaccccaacactaccatggca
agaaagggccagaccaaggagctgaactgcacagcgaggggcgagcagcccattattatc
cgctgggagagaggagacacggtcattgatgcagagagaaacccccggtactccatcact
atcaacaagaagggagatgaagtcatctctaccctgaagctaaacccagccgagcgagga
gattcagtcttcttctcctgtcacgccatcaactcctatggagagggccgaggactcatc
cagctcaccgttcaagaaccccctgatcctcctgagctggaggtgagggaagtgaaggac
agaagcatgaacctgcgttggatccaaaggtttgatggcaacagcatcatcaccagctat
gacattgagtacaagaacaaatctgactcttgggatcacatgtacacgaccaggaacatt
tcacctacaaacaatcaagctaatatcgtggagctgcatccagcttgtgtttacagcatc
cgcatgtattcttataacaaaatcggccgcagcctccccagcaaagagctaactatcagc
acagaggaagcgccacctgatgggcccccgatggatgttgtactgcagccaatgacgtca
cagagcatacgagtcacatggagggctcctaaaaaggagctgcagaacggcgtgatccga
ggctatcagatcggttacagggagaacggaccaggcagcaacgggcagtacagcatcgtg
gagatgaaagcaacgggggacagcgaggtgtacaccttggacaacctgaagaagtttgct
cagtacggcgtggtcgtccaggcttttaacagagccggaaccggaccgtccagcaccgag
atcaacgccaccacgctggaagatgtgcccagcgagcccccgcagaacgtgagagcaatc
tctgtgacgtcagacgaggcggtgatcacgtggtcggagccgccacgcatgacgctgcac
ggcgtgctgaaaggctacagggttgtgttttggtccctcttcccggacggagaatgggga
gagatgcagaacatcaccaccacacgggaacaagtggagctccgcgggcttgagaagttc
accaactacagcgttcaggtcctggcctacacgcaggccggagatggagtccgcagcaac
gtgctgtacatccagacacgcgaggaccttcccggtccgccagccggcatcaaggcggtt
ccttcctctccaagcagcgtggtcgtgtcttggttaccgcctctcaaaccaaacggcgtt
atccgcaaatacaccatttactgctccagtccaggatctgggcagccggcgcccagcgag
tacgaggccaaccccgagatgctcttttaccgcatcacgcacctcagccgtggcaagcag
taccacatctggtctgcagcggtgacaaccgctggccgaggcaacatcagcgcaaaggtc
accgtggaacctgctgggaaagttccggccaagatcctttccttcggggggacggtgacc
acaccctggatgaaggaagtgcgtctgccatgcagctcagtaggagagcccgcccccacc
atcaaatggaccaaagacagcgaggactccacccttcctgtgacagctgacagccagcgg
cagatcctgtccaacgggacgctggtgctgcggtcagtcaaagcagaggattctgggtac
tacacctgcacggctaccaacaccttgggctttgacaccatcattgtgaacctggtggtt
caagttcctcctgatcagccccgtctgactgtctccaccacctccacctcctccatcacc
ctggcttggattcctggggacaacggaggaagttcgatcagagggtttgtgctgcagtac
tctgtggacaacacagaggagtggagggatgtgttcatcagctccagcgagcgttccttt
aggttggataatctgcgctgcggaacgtggtacaaagtcaagctggcggctaagaacagc
gttggctcgggtcgcatcagtgagatcattgaggccaagacacatggaagagagcctgtg
tttaacaaggaccagccgctgctcacacacatcaactccacacacgcaggactgaacctg
cagggctggaccagcggcggctgccccatcaccgacctcatgctggacttcaggcccaaa
ggcacgtgggcctggcagagcctcaaggccaactccaccaatcagctgttcctcagtgag
ctgcgagaggctacgtggtacgagctcaaaatgaaggcctgcaacagcgccggctgtgga
aaccagacctcccagtttgctaccaccgactacgacggcagtacgatcccgcccatcaaa
tcagcccgtggggaaggggacgatgtgaaaaaactcttctccatcggctctcctgtaatt
ctggtcactctaggcgtggctttactcttcatcatccgcaagaaacgcaaggagaagcgg
cttaaacggctcagggatgcaaagagcctggctgaaatgctcatcagcaagaacaaccgc
agcatagacacgcctgtgaagggccctccccaggggccgaggctccacatcgacatcccg
cgagttcagctgctcatcgaggacaaggagggaatcaagcagataggagaggacaaggct
gcggtgccggtgacggacacagagttcagccagtccgtcaaccctcagaacttctgcacc
ggagtggctctgcaccaccaggccctcatccagaactcagggcctctgatcgacatgtct
gacatccgtcccggcaccaaccctgtgtcaaggaagagcatcaaatccgcccacagctcc
aggaacagatactccagccagtggacgctgagtcgacccagtcagtccacagcttcggct
cggactctgacctcagactggcggacgatgggatcccacggcatcaccgccacggagagc
gacagctacagcgccagcctctcgcaggacacggataaaggtcggaacagcatggtgtcg
acggagagcgcgtcctccacctacgaggagctggcccgagcgtacgaacacgccaagctg
gaggagcacctgcagcacgccaagttcaccatcacagaatgcttcatctcggacagctcg
tctgaccagatgaccacgggtaccaatgacccggcggatagcatgacctccctcagcacg
ccgtctgagccgggcatctgccgcttcaccgcctcaccgcccaaaccgcaagactacgac
cgcgggaaaaatgtggcggtgcccattccccaccgggcgaacaaaagtgaattctgcaat
ctacccctttacatgaagtcggacccattcttccggaagcaaggggactccctgcatgac
ccatgtccagctgtgccaccgcgggaagcctcgattcgcagcctgactcagcgggcatac
cacacccagggccgccacaagactctggactcggccaagcagcaggcgctgacgctggtt
cactccggcctgggcagcctgggggccagctcgggcacctccaccttgccccagaggact
ctcaccatgcccagctccagcaacgcggcaacggcctccacgtccagcaccagcagcaac
ccggccggcagcaacaaggtgggcggctccagagactcgctgctggagagcagctcctca
gccctggggaggctgcagaaacagagcgtgggggcctattccaagtcctacacgctggtg
tag
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integrated database retrieval system
