Cyprinodon tularosa (White Sands pupfish): 119791113
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Entry
119791113 CDS
T07496
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119791113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctul03000
]
119791113
03036 Chromosome and associated proteins [BR:
ctul03036
]
119791113
Transcription factors [BR:
ctul03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
119791113
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
119791113
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
DUF3209
Motif
Other DBs
NCBI-GeneID:
119791113
NCBI-ProteinID:
XP_038152954
LinkDB
All DBs
Position
Unknown
AA seq
1886 aa
AA seq
DB search
MSALRGTSGNKLNLLVNKLHEYLAHSCIEDSNGTPASEASYGQRNKRFTVGNSPQDNASE
ADMDSRYSRRKPSVVVKHSGLDESGDSNTSEDFGRPVSSNGHLDVTRLPKGTVLVRPEPV
DNGRDEFRGPEFRSRKPGVLRKEFTKKRSGEQNVGIVCCTACGRQVNHFRRDSLYQHPVL
KVLICKACYKYYSSDDISKDGDGMDEQCRWCAEGGNLICCDYCSNAFCKKCILRNLGRKE
LSGILESKWYCYVCSPEPLFDLVMACNTVLENVEPLWSQQRRRSRAEPEKSELYHTMLPH
SPQNIPLDKWDHSGMDGNVIFNYNNLQVSKEITKKAKHLVESTNALNQTFVSFIETVTTS
KKEPSIRSVYLKSFLAVVKGLRKSLTALEENLKEEFRDLDVASNWEKILSNDCNLMNSDV
ELDVSDEKRLSNLKKLAVEQFEDNDSDSKGYIDLTITSDSSEKELELCSPSSDLKPSSSD
MDMSKKLIVQLTPVPVEQNQSADVLKLGDDIPEKENKTEKELTEDQEAQVASPKDKKRMC
FDASATPLFLKEKQGNRRSPRLKITPLRRQSDIIAKPSLSGGDSESDSDPEETPDAVPVA
SNDEQNLSRSRDDSDSDEVPAALLERAAMTQSSDEPQSDEEASQAPPEKVAKKCLFWLTK
NSPMSPEKLRRKRKMMDRSSESESGSRGVKARQESGTDSSSDDQDSQKEIHNLNTVRTIG
KPHLMRREEEGGTRKQKTMEATKSKGKSHQDMSDSSSSLSDDEQEYDSGSDISDQKMKPI
TENVASLGGAEFQQSSGDEEQSGPSWAAEDDEDPENRIAKQLLLAQIKANLSSDEDISSE
GETQEDQSDSEGNGEPSQGSEENPANEDGEDLVSESTDGKLDEPKSRHHLLRHKLTLDEG
ASNDKEEPEGGVETEKISRRTRRTHLFSGSETCSEGSGEMQMSEVLSESDEEAADDGLHR
SEAEDEELAFSSEGKNQPFCILLSDSSIEEESDKEDGGEETSESRGTPKGRRKIRRIIED
ENLRAETQEALREEEERRKRLADRLQQMEDWKEITVIPDELSQVDCPITTKLVLDQDEET
KMPLVQVHRNLVTHLKPHQVDGVKFIWDSCCESVEKANSSPGSGCILAHCMGLGKTLQVV
AFLNTVLLSSKLTFRTALVVCPLNTILNWVSEFKKWQHNLGENKVRVLELATVKDHLNRL
NTLQRWQREGGVMIMGYEMYRLLTQNTPVLRQKLRSPLVDPGPDFVICDEGHILRNETSK
ISQTMNAIKTRRRVVLTGTPLQNNLVEYHCMVNFIKKNLLGSLNEFRNRFINPIQNGQCA
DSTPRDVRIMKKRAHVLHSVLAGCVQRRDYSELTTFLPPKHEYVLLVRISTLQHKLYLYY
LDHVVSKHMLAAEDSMKGKTKTSANVFTDFQVLGRIWSHPWCLHLSSLSKDNMKQRHFQK
NEGKEVNKNGTIAVSTVEPQTEPPVGGHEASSSSGPRRPAQAWYKHLLSEGDARIMEHSG
KMVLLFEILRMAEDPGDKVLVFSQSLISLNLIEDFLAASHKAREPLSSVKEGTWIKNLDY
YRLDGSTCASLRKKWTDRFNNPSNHRGRLFLISTRAGSLGINLVAANRVVIFDASWNPSY
DIQSIYRVYRFGQLKPVFVYRLLAQGTMEEKIYDRQVAKQSLSFRVIDHQQIERHFTLFE
LTDLYTFEPDLLDDPNSKKSKRPTPILPKDSILAQLLQICKDWIVSYHEHQSLLDHKQEE
ELSEADRKAAWAEYEAESNKTNAPTGSNQDGLQTKTNEQLLEILNKSRMTLSSVFLSLQQ
IRTHSVEDYVLRLRQQYPLLPEAELNKKAENWKQSDDNRHILMHVFYQETLRNHESLTMQ
IQALLNSRRAAVTPSAPSSSHQPVPT
NT seq
5661 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctctcagaggtacctccggcaacaagctgaatttattggtcaacaagcttcat
gaatatttggctcattcctgcatcgaggacagcaatggcaccccagcatcagaggcgtct
tatggtcagagaaacaaacggttcactgtggggaactcaccacaggataatgcttcagag
gctgacatggacagcagatactcaaggaggaaaccttctgtcgttgtgaagcactcagga
ctggatgaatctggagactcgaatacgagtgaagactttgggcgacctgtcagctctaac
ggacacctggatgtcaccaggttgcctaaaggtacggtgctggtcagaccagaaccagtg
gacaacggaagagatgaattcagagggccagaatttcgcagtcgcaagccaggagttctt
cggaaagagtttacaaagaaacgttcaggagagcaaaatgtgggaattgtttgttgcact
gcgtgtggccgacaagttaaccacttccggagagattccctttatcagcatccggttctg
aaagtactcatctgcaaggcgtgttacaaatattactccagcgatgatatcagcaaggat
ggagacggcatggatgagcagtgcaggtggtgtgctgaaggtggcaacttaatctgttgt
gactactgcagcaatgctttctgcaagaaatgcatcctcagaaacttgggaaggaaggag
ctctccggcatcttagagagcaagtggtactgctacgtgtgcagccccgagccgctcttt
gacctggtgatggcgtgcaacactgtcctggagaacgtagagcctctgtggtctcagcag
cggcgaaggagccgagcagagccggagaagtcggagctgtaccatacgatgttgccgcac
tcgcctcagaacattcctctggataagtgggaccatagcggcatggacggcaatgtgatc
ttcaactacaacaacctgcaggtttccaaggaaatcaccaagaaggccaaacatctggtt
gaatccacaaatgccttgaatcaaaccttcgtcagtttcattgagacagtaacgacaagc
aagaaagagcccagcatccgctccgtatatctaaaatccttcttagccgtggttaaaggc
ctgagaaagtctctaacggccctggaggagaacctgaaggaggaattcagagacctggac
gtggcaagcaactgggaaaagatcctaagcaacgactgtaatctgatgaactcagacgtg
gagcttgatgtgtctgatgaaaaacgcttgagtaacttgaagaaactggcagtggagcaa
tttgaagacaatgactctgattccaaaggttacatcgacctgacgatcaccagcgacagc
tctgaaaaggaactagagttgtgttctccgagctccgaccttaagccgtcttcaagtgac
atggatatgtctaaaaaactcattgtacaactcacacctgtacctgtggagcagaatcaa
tccgcggatgtcctaaagctgggggacgacatcccagagaaggaaaacaaaactgagaag
gaactcacagaggatcaggaagcgcaagttgcaagtccaaaagacaagaaacggatgtgc
ttcgatgcctccgccacacctctcttcctgaaggagaagcaaggcaacagacgatcccct
cgtttaaagatcactcctctgaggcgacagagtgacatcatagccaaaccgtccctctcc
gggggagacagcgagagtgactctgaccctgaggagacccctgacgctgtacctgtcgcc
agcaacgacgagcaaaatctgagcaggtcgagagacgattcagattcagatgaagtcccc
gccgccctcctggaaagagcggcgatgacgcagagctccgacgaacctcagagcgacgaa
gaggcgagccaggcgccgcccgagaaggtggccaagaagtgtctgttctggctgaccaag
aacagccccatgtcgcctgagaagctacggcgcaaacgtaagatgatggaccgctcctct
gagtccgagtcgggcagcaggggggttaaagccagacaggagagcgggacagattcctcg
agcgacgaccaagattctcagaaggaaatacataacttgaacacggtgaggactatcggg
aagcctcacctcatgaggagagaagaggaggggggaaccagaaagcagaagaccatggag
gccaccaagtctaaagggaaatctcatcaggacatgagcgactcatcgtcgtcattgagc
gacgacgaacaggagtacgactcggggagtgacatcagcgaccagaagatgaagcccatc
acagaaaacgtggcctcgctcggaggagcagagttccagcagtcatcaggagatgaggag
cagtctgggccctcatgggcagcagaagacgacgaagatcctgaaaatagaatcgctaag
caattgctattggcccaaataaaagccaacctctcttcggatgaggacatttcttctgaa
ggggaaactcaggaggatcagtctgattcagagggcaacggcgaaccgagccaaggctct
gaggagaatccagccaatgaagacggagaagacctggtttcagagtccacagacggcaaa
cttgatgagccaaagtccaggcaccatctgctccgccacaaactcacattagatgaggga
gcttcaaatgacaaggaagaacctgaggggggagtagagacggagaagattagtagaagg
accagaaggacacatctgttttctgggagtgaaacttgtagcgaaggtagtggagagatg
cagatgagcgaggtgctgagtgagtcagacgaagaggctgctgacgatgggctccacaga
tctgaagcagaagatgaggaattagcctttagttcggaaggaaagaatcaaccgttctgc
attctgttgtctgactccagcattgaagaggagagcgacaaagaggatggaggcgaggag
accagtgaaagtagaggaacccctaaaggacgcagaaagatccgcagaatcatcgaggat
gaaaacctccgcgctgaaacccaggaggccctcagagaggaggaggagagacggaagcgc
ctggctgacagattgcaacagatggaggactggaaagagataacggtgatcccagatgaa
ctgtctcaggtggactgtcccatcaccaccaagctggtcctggaccaggatgaggagacc
aagatgccgctggttcaggtccacaggaacctggtgacgcacctgaagcctcaccaggtg
gacggtgtgaagttcatatgggacagctgctgtgagtctgtggagaaggccaactcttcc
cccggatcaggatgcatcctggcacactgcatgggtctgggaaagactctgcaggtggtg
gcgttccttaacacggtgctgctctcatcgaagctgaccttcagaaccgccttggtggtt
tgtccgctcaacacgatcctcaactgggtcagcgagttcaagaaatggcagcacaatctg
ggggagaataaagtccgggttttagagctggccacggtcaaggatcatctgaaccgactc
aacactctgcagaggtggcagagggagggaggagttatgatcatggggtatgagatgtac
cgcctcctgacgcagaacactccagtcctacgccagaagctgaggagccccttagtagat
ccaggtccagactttgtcatttgtgacgagggtcacatccttcgcaatgaaacctcaaag
atctcccagaccatgaacgccattaagacccggaggagagtggttctgacgggcaccccg
ctgcagaacaacctggtagagtaccactgcatggtgaatttcatcaaaaagaacctcctg
ggctccctgaacgagtttagaaaccgcttcatcaaccccatccagaacggccagtgtgct
gactccacccccagagatgtccgcatcatgaagaagcgtgcccatgttctccactccgtt
ttggctggatgcgttcagagaagagattactctgagctgactacgtttctgcctcccaaa
cacgagtacgtgctgttagtgaggatctccacgcttcagcataagctgtacctctactac
ctcgaccatgtggtgtctaagcacatgttggctgctgaagactccatgaaagggaaaacc
aaaaccagcgccaacgtgttcacagattttcaggtcctgggcagaatttggtctcatcca
tggtgcctccacctcagcagcctcagcaaagacaacatgaagcagagacatttccagaag
aacgaagggaaagaagtgaataagaacggaaccatagccgtttctacagttgaaccccaa
accgagccaccggtgggaggacatgaagcatccagcagctcaggtcctcggcgtcctgct
caggcctggtacaaacatctgctgtctgaaggcgacgccagaatcatggagcattctgga
aaaatggttcttctgtttgaaatcctccgaatggccgaagacccgggcgataaagtgctg
gtgttcagtcagtccttgatctcactgaacctcatcgaggatttccttgccgcctctcac
aaagccagagagcctttatcatccgtaaaagagggcacctggattaaaaacttggattac
tatcgtctggacggctccacctgcgcttcactgaggaagaaatggacggacaggttcaac
aatccctccaaccaccgcggcaggttgttcttgatctcaacgagggccggctccctcggg
atcaacctcgttgccgccaacagggtggtcatcttcgacgcgtcctggaatccctcctat
gacattcagagcatttacagagtgtaccgcttcggtcagctgaagccggtgtttgtgtac
cgcctgctggctcagggaaccatggaggagaagatctacgaccgacaagtcgccaagcag
tccctgtccttcagagtcatagatcatcaacagatagagagacacttcactctttttgag
ctgactgacctctatacgttcgagccagacctgctggatgatccaaactctaagaagagc
aagaggccaactcccatcctgccgaaggacagcatcctggcgcagctgttacagatctgt
aaagactggatcgtctcctaccatgagcaccaatccctgctggaccacaagcaagaggag
gagttgagcgaagcagatcgcaaagctgcgtgggccgagtacgaagccgagtcgaacaaa
accaacgcccccaccggttcaaaccaagacggcctgcagacaaagactaacgagcagctg
ctggaaatactcaacaaaagcagaatgactttaagctctgttttcctgagcctgcagcag
ataaggactcattctgttgaggactatgtcctacgactgcgccagcagtaccctttgttg
ccagaagccgagctgaacaagaaagctgagaattggaaacagtctgatgataacagacat
attctcatgcatgtcttttatcaagaaaccctcagaaaccacgagtctctcacgatgcag
attcaggcgctgctcaacagtcgacgagctgctgtgacgcccagcgccccaagctcctcc
caccagcctgtgcccacctga
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