Cyprinodon tularosa (White Sands pupfish): 119791308
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Entry
119791308 CDS
T07496
Symbol
lrrc4ba
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04514
Cell adhesion molecule (CAM) interaction
ctul04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
119791308 (lrrc4ba)
04517 IgSF CAM signaling
119791308 (lrrc4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ctul04515
]
119791308 (lrrc4ba)
Cell adhesion molecules [BR:
ctul04515
]
Immunoglobulin superfamily
NGL family
119791308 (lrrc4ba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_9
LRR_14
V-set
Ig_2
LRRNT
VEGFR1-3_N_Ig-like
LRR_NXF1-5
LRR_NXF2
Motif
Other DBs
NCBI-GeneID:
119791308
NCBI-ProteinID:
XP_038153275
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MRIATLTCLPGPSPFLFLLVHLLLRLFLILHGPEITGASSTCPSLCTCSNQASRVICTRQ
NLEQVPESISVNTRYLNLQENSIQVIKSDTFKQLRHLEILQLSKNQIRQIEIGAFNGLPN
LNTLELFDNRLTLVPTQAFDYLSKLRELWLRNNPIETLPSYAFNRVPSLRRLDLGELKKL
EYISDAAFVGLVNLRYLNLGMCGLKDIPKLTPLVRLEELELSGNRLEIIRPGSFQGLVSL
KKLWLMHSQVSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVC
NCDVLWLSWWLKETVPSNTTCCARCHAPPVLKGKYIGELDQSHFTCFAPVIVEPPTDLNV
TEGMAAELKCRTSTSTTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYT
CMVTNAAGNTTATAVLNVTAADALVNITFFTTVTVETDNGGPNDYAQVDETTISIPSDLL
SEVVPTTDSSLTGGWLSSSPRATRPTFTVPFTEPGFSGLDDVMKTTKIIIGCFVAITFMA
AVMLVVFYKLRKQHQLHKHHGPARAIEIINVDDDLGPGASGRGSGISGGSTVTQSAGSGL
GGCQSLRLHHPEIVNLPNLARSEHLNHYYKTHHFNSNMMGLGMGTGPGVGLNNNNNPSPC
SQAQSISCSQVPSSTGGGTSTGGTLPSNIALPQLGLHSSLKGLIGKGQNEPLLFKSGSKE
NVQETQI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacgctgacctgccttcccggcccttcccccttcctctttctattggtc
catctgctcctgcggctctttctcatcctccacgggccggaaataacgggagcctcctcc
acctgcccttccctttgcacgtgctccaaccaggccagccgagtcatttgcaccaggcag
aacctggagcaggtgcctgaaagcatatccgtcaacacgcgatacctcaacctgcaggag
aactcgatacaggtcatcaaatcggacaccttcaagcagctaaggcaccttgaaattctt
cagctttccaagaatcagataagacaaattgaaatcggagcatttaatggcctccccaac
ctcaacacgctggagctctttgacaaccgcctcacgttggtgccaacgcaggccttcgat
tacctcagcaagctacgggagctgtggttacgcaacaaccctattgagaccctccctagt
tatgccttcaaccgtgtgccctccctgcgtcgcttggacctgggtgagcttaaaaagttg
gaatacatctctgatgcagcctttgttggccttgtcaatctacggtacctgaacttgggt
atgtgtgggcttaaagatattcccaaactgacaccccttgtgcgtttggaagagctggag
ttgtcagggaaccgcctggagataattcgtcctggatctttccagggactggtgtctctt
aaaaagctgtggctaatgcactcacaggtttctgtgattgagcgcaatgcctttgatgat
ctaaaaaacctggaggagctcaatctctcacataattccctgcactccttgcctcatgat
cttttcacaccccttcaccaactggagagggtgcacctcaaccataatccttgggtctgc
aattgtgatgtactttggcttagttggtggctgaaggagacagtgcccagtaacaccacc
tgctgtgcacgctgccatgctcctccagttctcaagggcaagtacattggagaacttgac
cagagccacttcacctgctttgcacccgtcattgtagagccccctactgaccttaatgtg
actgaagggatggctgcagagctgaagtgtcgcacaagtacctctacaacgtccgttaac
tggattactcccaacggtaccctaatgacccatgggtcttaccgagtccggatttctgtt
ctacatgatggcacattgaacttcacaaatgttaccctgagggacacaggccagtacact
tgcatggttaccaatgctgctggaaacactactgcaactgctgtcctcaatgttactgct
gctgatgcccttgtcaacatcaccttttttacaactgttactgtggaaacagataatgga
ggacccaatgattatgcacaggttgatgagaccaccatatccattccctctgacctattg
tctgaggtagttcctaccacagattcctctctaactggtggttggttgtcctcctctcca
cgggcaactcgcccaactttcactgtgccattcacggaaccaggtttctctggcctggat
gatgtgatgaagaccaccaagatcatcattggctgcttcgtagccatcactttcatggca
gcagtgatgctggtggtgttctataagctgaggaagcagcatcagctgcacaaacatcat
ggccctgctcgtgcaattgagatcatcaatgtggatgatgacctaggtcctggggctagt
ggccggggcagtggaatatctggaggctccactgtaacacaaagcgcagggagtggatta
ggaggatgtcagagtctcaggttgcaccatccagagattgtgaatctaccaaacctagct
cgatcagagcacctcaaccactactacaaaacacatcatttcaacagcaacatgatgggc
cttgggatgggcacagggccaggtgtgggcctcaacaacaacaacaacccctcgccatgc
tctcaagcgcagagcatatcctgctcccaggttccatctagcactggtggggggacgtcc
actggtggcacccttccgtccaacatagccctgcctcagttgggtctacatagttctctg
aaaggcctgataggaaaaggccaaaatgaaccactccttttcaagagcggctcaaaagaa
aatgtgcaagagacccaaatctaa
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