Cyprinodon tularosa (White Sands pupfish): 119791336
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Entry
119791336 CDS
T07496
Symbol
irx1a
Name
(RefSeq) iroquois-class homeodomain protein IRX-1a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctul03000
]
119791336 (irx1a)
Transcription factors [BR:
ctul03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
119791336 (irx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
119791336
NCBI-ProteinID:
XP_038153313
LinkDB
All DBs
Position
Unknown
AA seq
496 aa
AA seq
DB search
MSFPQLGYPQYLSASQAVYGSDRPGVLTPSSRGGSSEIGGSPSATAAAAVTSVLGMYANP
YAHNYSAFLPYTSADLALFSQMGSQYELKDSPGVHPATFAAHTSPAFYPYGQFQYGDPAR
PKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK
VTWGNRSKEDGEDGNLFGSGDEAEKNEDEEEIDLESIDIDKIDENDGDQSNEDDDDKSTE
GSREHRGGVGAPGDLDSLEKRRAFALQAHEAFEKSKSAMSVHTGGKENSDGNNNTRVVSP
DRPGSFPLPSNNKPKIWSLAETATSPDSSSQKPSSPCAPGSNTSHPSAPHHQIQTHPAFL
PSHGLYTCQIGKFHNWTNGAFLGQNSLLNVRSFLGVNQHHHHHPSNHPLSAQQQQQQQQP
ASVVVSPVAASAPSNDSKSPADTHSPKHIEHERSDSPPTQTLKSSFRPILDRSSMPSSAR
SPQDATQRVLTALSSA
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccgcagttaggctatccgcagtatctaagtgcctcccaggcggtgtacggg
agcgacagaccgggagtgcttacgccatcatcacggggaggaagctcggaaattggtgga
agtccgtcagctacggcggctgcggccgtcacatctgtcctgggcatgtacgcaaacccg
tacgcgcacaactacagcgcgttcctgccgtacaccagcgcagacctggctctcttctca
caaatggggtcgcagtatgagcttaaggacagccctggcgtgcatccggccaccttcgca
gcacacacatccccagccttttacccatacggccagttccagtatggagaccctgccaga
cccaagaacgccacccgggagagcaccagcacactgaaagcctggctcaatgagcacagg
aagaacccatacccaactaaaggggagaagatcatgctggccatcatcactaagatgaca
ctgacccaggtttccacctggtttgccaatgctaggaggaggttaaagaaggagaacaag
gtgacctgggggaacaggagcaaggaggatggggaagacgggaacctgtttggtagtgga
gacgaggccgagaaaaacgaagacgaggaggagatcgatttggagagcatagatatagac
aagatagacgagaacgatggggatcaaagtaatgaggacgatgacgataagtccacggag
gggagcagggagcacaggggaggcgttggcgcacctggagacttggacagcttggaaaaa
agacgggccttcgccctgcaggcccacgaggcctttgagaaatctaagagtgcaatgtca
gttcacactgggggcaaggagaactcagacggcaataacaacacacgggttgtgtccccc
gacagacctgggagttttcccctcccctctaacaataaacccaaaatctggtctctggcg
gagaccgccaccagccccgacagttcatcccagaaaccttcctccccatgtgcaccaggg
agcaacacttctcacccatcagcgcctcaccaccagatccaaacccacccggccttcctc
ccaagccatggactgtacacatgccagattggaaagttccacaattggacaaacggggcc
ttcctgggccagaactccctgctgaatgtcagatctttcctgggagtaaaccaacaccat
caccaccaccccagcaaccatcctctgtcggcccagcaacagcagcaacaacaacagcct
gcatcagtagtagtgtcaccggttgcagcttcagcgcccagcaacgacagcaagtcccca
gcagacacccacagtcccaaacacatagagcacgaaagatctgattcacctccaacacag
accctgaagtcctcatttcgtcctattcttgacagatcctcaatgccttccagcgccagg
agtccccaagacgccacgcaacgtgtcctcaccgctctctcctcggcttga
DBGET
integrated database retrieval system
