Cyprinodon tularosa (White Sands pupfish): 119791337
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Entry
119791337 CDS
T07496
Symbol
sntb1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119791337 (sntb1)
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Ortholog
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GFIT
Motif
Pfam:
PH_17
PDZ
PH
PDZ_6
PDZ_2
PH_9
Gln_amidase_like
Motif
Other DBs
NCBI-GeneID:
119791337
NCBI-ProteinID:
XP_038153315
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All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MAVVAAGAGVSSGSGALKSGFLEVLVRESWHKVFANLNEEALTLSCEDCGVNDGISSNGV
TNGSYLDNSNTNSNNGPQAVRTAFTDLPERVPEAIANKKRCVKVTKQDIGGLGISIKGGK
ENKMPILISKIFKGLAADQTQALYVGDAILSVNNMNLRDATHDEAVQALKRAGKEVTLEV
KYMREATPYVKKGSPVSEISWETPPPESPRPSSPPITSFPSSSSSPHSLSSPSQPYLSLY
SDRRYIPLKMSCVTRAMTKADPENRQLELHSPDARHTIVLRCPDQPSALSWFSSMHSVTS
TLAQRTAAEVVQNTSKTGVAGSKEIRHLGWLAGKTESEKQSWKPVLVVVTEKDLLLYESL
PRSKEAWQNPAHIFPLLATRLVHSGPDRGSPCSGTELFFATRTGTRLGIETHFFRTETTK
DLSMWTRHIVNGCHASAEMIKEVTTSCLYRSQECRLVIHYEKGFSVLADPKGRYGEDGEE
RVIDTSVKPQVLLSYPFEKLKMSADDGVRMLCLDFGGEEGEIQLDLHSCPKPIVFIVHSF
LSAKISRLGLVA
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtagcagcgggagccggagtctcgagtggctccggagcgcttaaaagtgga
tttttggaggttttggtgcgggagagctggcacaaagtttttgccaacttaaacgaggag
gcgctcacgttgagctgcgaggactgcggcgtcaacgacggcatcagctccaacggggtc
accaatgggtcttacctggacaacagcaacactaactccaacaacggtccccaagcagtg
cgcaccgccttcacggacctcccggagcgagtcccggaggcgattgcgaacaaaaagcgg
tgcgtcaaggtgaccaagcaggatatcgggggactcgggataagcattaaaggagggaag
gagaacaaaatgcccatactcatcagcaagatatttaaggggcttgcagctgatcagact
caagctctgtatgtgggggacgccatcctctcggtgaacaacatgaacctgcgggacgcg
acgcacgatgaggctgtgcaggcactgaaacgagcagggaaggaggtgacactggaagtt
aagtacatgcgtgaggctacgccatatgtcaaaaagggctccccggtgtcagagattagc
tgggagacgccccctcctgagtctccacgccccagcagccctcccatcacttccttcccc
tcctcctcttcctcgcctcactccctgagctctcccagccagccctacctgtctctatac
agcgacaggaggtacatacctctgaagatgtcttgtgtaacccgagccatgaccaaagca
gatcctgagaacagacaactggagctgcacagtcctgatgccagacacaccattgtgctc
cggtgcccagaccaaccatctgccctgtcctggttctcttccatgcactcggtcacatcc
acgctggcacagcggacggcggcggaggtcgttcagaatacatccaagacaggggtagct
ggcagcaaagagatccgacacctgggatggctggcagggaagacggagagtgagaagcag
tcttggaagccagtgctggtggtggtgacagagaaggacttgttgctgtacgaaagtttg
cctcgaagcaaagaggcctggcaaaaccctgcacatatttttccacttttagcaacacgt
ctggtccattctggtcctgaccgggggtcgccatgctctggtactgagctgttttttgcc
actcgaacaggcacaagacttggcatcgaaactcactttttccgcaccgagaccacgaag
gatttatccatgtggacccgacacatcgtcaacggatgtcacgcatcggctgagatgatc
aaagaagtcacaactagttgcctgtaccgaagtcaggagtgccggctggtgattcactac
gaaaagggcttctctgtgctggctgacccaaaaggaagatatggggaagatggtgaagaa
cgagtaattgacacatcggtcaagccccaggtgctcctttcctacccctttgaaaaacta
aaaatgtctgctgatgacggcgtgcgcatgctctgtctggactttggaggagaggagggg
gaaattcaactggatcttcactcatgtccaaaaccgatcgtcttcatcgtccactctttc
ctgtctgctaagatctcccgcctgggtctggtggcctga
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