Cyprinodon tularosa (White Sands pupfish): 119791468
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Entry
119791468 CDS
T07496
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119791468
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ctul04040
]
119791468
Ion channels [BR:
ctul04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119791468
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_5
Ank_3
PKD_channel
Motif
Other DBs
NCBI-GeneID:
119791468
NCBI-ProteinID:
XP_038153516
LinkDB
All DBs
Position
Unknown
AA seq
789 aa
AA seq
DB search
MYYCRLAALQVKMSKSQISDFHLETDDRTEEERSMQKAPKKDGLASALGMDKEEPKAPMD
TDYQEDMEPRKPEIRFNLNFDKGIRGEPPEQKRDSSTFTIERLFEAVASRDPEKLDGLYE
YLHRSMKKLSDSLYQSYGKTALMKALMHFKDGKNQTIDVLINISERIGDIKEFVNAAYTN
SYYKGQTALHIAIERRSIYYVKLLVSKGADVHAKACGKFFQPHDGPNFYFGELPLSLAAC
TNQPDIVDYLMENEYLRADATMTDSHGNTVLHALMFVADNTKENTEFIAAIYDRILKNNA
RLYPKINLEEKENKDGLTPLKLAAKLGKNGIFSHILQREFQENHFKHLSRKFTEWVYGPV
HSSLYDLSSVDSFEKNSVLEIIIYGSDIPNRHAMLETELLSDLLEDKWKKFGGRMFFVNF
LIYLVYLSIFTGVAYNKRKFQDLNVWFHEDKMSSFLYASGMLFTLIANCYFFITGILDMK
RKRPKTQSLMIDGYYEILFFAQGLLFLISTILYVADRDEYLGFLVICIALSWVNVLYYSR
GDRHMGVYSVMIQKMILSDILHFLFVYLVYLFGFSAAVVTLLVEPEQPATGKGLFGTIAP
NSECVKPTYRNFSYTTLELFKFTIGMGDIDFTNDYKYMEVFYILLIGYIILTYILLLNML
IALMNRTVENITEESNSIWKLQRAVTILDMEKRLPSCLKESLRSGVEKKLGPALGDDRRR
FFRVESVNWNKWNTNLVNISEDPGCFERIHQLDVPTGRYNRERSWRGFFMESRRRRMPST
STEMRPLNI
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgtattattgtagactggcagcattacaggtgaagatgagtaagtcacagatttcggac
ttccatctggagacggatgacagaacagaggaagaaagatcaatgcagaaggcaccaaag
aaggatggtttagcttctgctttaggtatggacaaagaggagcccaaggccccaatggac
actgattaccaagaggacatggagccccgaaagcctgaaattcgattcaatcttaacttt
gataaagggattcgaggtgagccaccagaacaaaagagggatagctccacttttaccatc
gagcgattatttgaagcagttgccagcagggaccctgagaaactggacggcctgtacgag
tacttgcatcggagcatgaagaaactctctgactctttatatcagtcatatggcaaaacc
gccctgatgaaggctctcatgcacttcaaagatggcaaaaaccaaaccatagatgtgctg
atcaacatttcagagaggattggtgacattaaagagtttgtgaatgcagcctacaccaat
agctactacaaaggtcagactgctcttcatatagccattgagagaaggagtatttactat
gtgaaactactggtcagcaaaggtgcagatgttcatgctaaagcatgtggaaagttcttt
cagccacatgatggacccaacttctactttggtgagctgccattgtctctagcagcctgc
acaaaccagcctgacatagtggactacctcatggagaatgagtatctacgagcagatgcc
acgatgactgactctcacggcaacacagtgctgcatgctctgatgtttgtggccgacaac
acaaaggagaacacagagtttattgcagccatttatgaccgtatcctaaagaacaatgcc
cgactgtatcctaagataaacctggaggagaaagagaacaaggacggtctaacacctctc
aaactggctgccaagttgggcaaaaatgggattttttctcacattcttcaaagagaattt
caagagaatcacttcaagcacctatcccgtaaattcactgagtgggtttacggacctgtc
cacagttccctgtatgacctgtcctctgtggactcattcgagaaaaactctgtcttggaa
attataatctatggcagtgacattccgaatcgtcacgcgatgctggagaccgagctgctt
agcgacctgctggaggataagtggaagaagtttggagggagaatgttttttgtcaacttc
ctgatctaccttgtgtacctttccatctttactggtgtagcctacaacaaaagaaagttt
caagatttaaatgtttggtttcatgaggacaaaatgtcgagtttcctgtatgcttcaggc
atgctgtttacattaatagcaaactgctatttcttcatcactgggatcttggacatgaag
agaaagcggccaaagacacagagcctgatgattgatggatattatgagattctctttttt
gcgcaaggcctccttttcctgatctccaccattctatatgtggcggacagggatgaatac
ctgggcttcctggtgatatgtatagctctcagctgggtgaacgtgctctactactccagg
ggcgacagacacatgggcgtctacagcgtcatgatacagaagatgatcctcagtgatatc
ctgcactttctttttgtttacctcgtttatctctttggattctcagcagctgtggtaaca
ctgctggtagagccagagcagccagcgacagggaagggactttttggaaccattgcacct
aattcagagtgtgtcaaacccacctatagaaacttctcatacaccaccctggagctcttc
aagttcaccatagggatgggagatatcgactttaccaatgattacaagtacatggaggtc
ttctacatcctgcttattggctacatcattctcacctacatcctgctgctcaacatgctc
atagccctcatgaaccgcactgtggaaaacatcacggaggagagcaacagcatttggaag
ctgcagagggccgtcacaattctggacatggagaaaaggctcccctcatgtttgaaagag
agtttacgctctggggtggagaagaagcttggccccgctcttggagatgatcgccgaagg
tttttcagggttgagagtgtgaactggaacaagtggaacactaacttggtcaacatcagc
gaggatccaggatgctttgagcggatccaccagcttgacgttccaactgggagatataac
agagagaggagctggaggggctttttcatggaaagcagaagaaggaggatgccgtcaacc
tccactgaaatgaggcccctaaatatctga
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