Cyprinodon tularosa (White Sands pupfish): 119791910
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Entry
119791910 CDS
T07496
Symbol
smarca2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119791910 (smarca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctul03021
]
119791910 (smarca2)
03036 Chromosome and associated proteins [BR:
ctul03036
]
119791910 (smarca2)
Transcription machinery [BR:
ctul03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119791910 (smarca2)
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
119791910 (smarca2)
Chromatin remodeling factors
BAF complex
119791910 (smarca2)
PBAF complex
119791910 (smarca2)
GBAF(ncBAF) complex
119791910 (smarca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
119791910
NCBI-ProteinID:
XP_038154215
LinkDB
All DBs
Position
Unknown
AA seq
1594 aa
AA seq
DB search
MSTPSDTSGGMSHPGPSPGAGLSPGPILGPSPGPDPSPGSVHSMMGPSPGPGTPNAPHGM
QSQGQGDYSQDNMYPMHKPMEAAMNDKTMSEAMHFSHMKGVGMRSLHSGMGPPQSPMDQH
SQGYMSPHPSPMGIHEHASSPMSGGGGGPTPPHIPPSQSGPMMPMDPQGGMPNMSAMGPQ
GRGPSAFSPVQLQQLRAQILAYKILARGQPLPDNLQLAVQGKRSLPTMQQQQPVPQQQQQ
QQQQQQPPQQQQASGASPYRPSGMAPMSGPQSSPCPTPAMQGHNQSTAAKPWTDGQGGDN
QANAQKHLTPVPSGRPSPAPPPIPAGPLPGSSAAAHPPGQQVSPMLQMQQKQNRITPVQK
PQGLDPVGILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLR
QDVVACMRRDTTLETALNSKAYRRSKRQTLREARMTEKLEKQQKLEQEKKRRQKHQEYLN
SILQHAKDFKEYHRSVSGKTQKLTRAVANWHTNTEREQKKETERIEKERMRRLMAEDEEG
YRKLIDQKKDKRLAYLLQQTDEYVANLTSLVYEHKAAQAAKEKKRRKKKKKKVEGDGEGT
SAIGPDGEPMDESSQMSELPVKVIQTSTGKVLQGTDAPTSGQLEAWLEMNPGYEVAPRSD
SEESGSEFEEEDEEEMGKAETEEKKKTDPSGDEGAKHDAKNIIESAKQDVDDEYSVPTGQ
TSSQSYYGVAHAVIEKVEKQSSLLINGMLKHYQIQGLEWMVSLYNNNLNGILADEMGLGK
TIQTIALITYLMEYKRLNGPYLIIVPLSTLSNWVYELDKWAPSVVKIAYKGTPALRRGLV
PQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPR
RLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILII
RRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSAIQKVLYRHMQKGILLTDGSEKDK
KGKGGAKTLMNTIMQLKKICNHPYMFQHIEESFAEHLGYPNGIISGHDLYRASGKFELLD
RILPKLQATGHRVLLFCQMTSLMTIMEDYFGYRNFQYLRLDGTTKSEDRAALLKKFNEEG
SQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCT
VNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQNEEEDEVPDD
ETLNQMIARNEDEFELFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTY
EEEEEKMFGRGSRCRRDVDYSDAMTEKQWLRAIEDGNLEEMEEEIRLKKRKRKRRQDKDS
SSRDDGGMKAKKRRGRPPAEKLSPNPPKLTKQMNTIIDTVINYRDGRSGRQLSEVFVQLP
SRKELPEYYELIRKPVDFKKIKERVRNHKYRSLGDLEKDVMLLCQNAQTFNLEGSQIYQD
SIVLQSVFKSARQKIAKDEDSEDDSDEEDDDDYDSEAEAKSVRVRIKLGREGRSHDKGKK
RQSRGKAKPVVSDDDSDDDQDDNDQSDKSKSDED
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgccttcagacacgtcaggtggcatgtcccatcctggcccatcaccaggggca
ggcctgtccccagggcccatcttgggccccagccctggaccggatccctcccctggttca
gttcacagcatgatggggcccagtcctggaccaggaacacccaacgcaccccatggcatg
cagagccagggacaaggcgattactctcaggacaacatgtatcctatgcataagcccatg
gaggcagcaatgaatgacaaaactatgtctgaggcgatgcatttcagccacatgaaaggt
gtgggcatgaggtccctccacagcggcatgggacctccacagagccctatggaccagcat
agccaaggttacatgtctccacatccgtccccgatgggaatccatgagcatgcttccagt
cccatgtcaggaggtggaggtggtcctacaccgccccacattcctccatctcagtcaggc
cccatgatgcccatggatcctcaaggagggatgcccaacatgtctgcaatgggcccacaa
ggacgtggcccctctgctttcagcccagtgcagctgcagcagctcagagcccagattctg
gcctataagattctggcccgagggcagccgctgccagacaacctccagctggccgttcag
ggcaaaaggagtctccccacaatgcagcagcaacagccggtgccacagcagcagcaacaa
caacagcagcagcagcaaccaccgcagcagcagcaggcatctggtgccagcccatacagg
ccttcaggtatggcgcctatgagcggcccccaatcaagcccctgcccaacaccagccatg
caaggacacaatcaaagcacagcagccaagccttggactgatggtcaaggtggtgacaat
caagcaaacgcacagaagcacctcactccggtacccagtggccgcccatctcctgcaccc
ccgccgatccctgcaggaccgttgccagggagttcagcagctgctcaccctccgggtcag
caggtgtcccccatgctccaaatgcagcagaagcagaaccgaattactccggtccagaag
cctcagggtttggacccagtgggaatcctgcaggagagagagtacagactgcaggctcgg
attgctcatcgcatccaggaactggagagtctacccggttccttgcctccggaccttaga
actaaagctacagtggagctcaaagctctacgtctgctcaacttccagcgccagctcagg
caggatgtggtggcgtgtatgaggcgagacacgaccctggagacggccctcaactcgaag
gcttacaggcgcagcaagcggcagacgctgagggaggcgcgcatgacagagaagctggag
aagcagcagaaactggagcaagagaagaagcgccgacaaaaacatcaggaatacctcaac
agtattcttcagcatgccaaggactttaaggaataccaccgctcagtgtccgggaaaacc
cagaaactcaccagagctgtcgccaactggcacacaaacaccgaacgggagcagaagaag
gaaactgagagaattgagaaggagagaatgagaagactgatggcagaggatgaggaaggc
taccggaaactcattgaccagaagaaggacaaacgtctggcctatttgctgcaacagacg
gatgaatatgtggccaacctcacatctctggtgtatgagcacaaagctgctcaggctgcc
aaggagaagaagaggaggaagaagaaaaagaagaaggtggaaggagacggcgaaggcacc
agcgccattggacccgatggagagcccatggatgagagcagccaaatgagcgagctgcca
gttaaagtgattcagacgtcgactgggaaggttctacaggggacagatgccccgacgtct
ggccagctggaggcttggctggagatgaaccctgggtatgaagtcgccccacgttcagac
agtgaggaaagtggctccgaattcgaggaggaggatgaagaggaaatgggcaaggcggaa
acggaggagaagaagaaaaccgatcccagtggagacgaaggggctaagcacgatgccaag
aacatcatcgagtcagccaaacaagatgtggatgatgagtacagcgttcccactgggcaa
accagctcccagtcttattatggggtggcccacgccgtcattgagaaggtggagaagcag
tcgtctctgctgataaacggcatgctcaaacattatcagatccaggggctcgagtggatg
gtgtccctctacaacaacaacctcaacggcatcctggctgatgaaatgggcctcggtaaa
accatccagaccatcgccctcatcacctacctgatggagtacaagaggctcaacgggccc
tatctcatcatagtccccctatcgactttgtccaattgggtttatgaacttgacaaatgg
gctccttctgtggtcaaaattgcttacaagggcactcctgctctgcgtcgcggtcttgta
cctcagcttcgcagcggcaaatttaatgttcttctgactacctatgagtacatcatcaag
gacaagcacatactggccaagatccgctggaagtacatgattgtggacgagggccatcgt
atgaagaaccaccactgtaaactgacgcaggtgttgaacacccactatgtggccccccgc
cggctcctccttaccgggaccccactgcagaacaagctgcctgagctgtgggctctgctc
aacttcctgctgcccaccatcttcaagagctgcagcacctttgagcagtggttcaatgca
cctttcgccatgactggagagagggttgaccttaatgaggaggagaccattctaatcatt
cggcgtctgcataaggtgctccgcccatttttgcttcgaagactgaagaaggaggtggaa
tctcaactgccagagaaagtggaatacgtcattaagtgtgacatgtcagcgatccagaag
gttctctaccgccacatgcagaaaggcatactgctaaccgacggctcagagaaagacaag
aagggcaaaggaggtgctaagaccctgatgaacaccatcatgcagctgaagaagatctgt
aaccatccgtacatgttccaacacatagaggaatcttttgctgagcacctgggctacccg
aatggcatcatcagtggacatgatctatacagagcttctgggaagtttgagcttctcgat
cgaatcctacccaagctccaggccactggccacagggtgctgctcttctgccagatgacc
tctttgatgaccatcatggaggattacttcggttatcgtaacttccagtatttacggctt
gatggaaccaccaaatctgaggaccgtgctgctctcctgaagaaatttaacgaggaagga
tctcagtacttcatcttcctcctcagtaccagagcaggtggccttgggctcaacctgcag
gctgcagatacagtcgtcatctttgacagtgactggaacccacaccaggatcttcaggcc
caggatcgggctcaccgtatcggacagcaaaatgaagtccgtgtgcttcgtctctgcaca
gtcaacagcgtggaggaaaaaatcctggctgctgccaaatacaaactaaacgtggatcag
aaggttatccaagcaggcatgtttgaccagaaatcctccagccacgagcggcgggccttc
ctccaagccattttagaacatgaggaacagaacgaggaggaagacgaggtccctgatgat
gaaacccttaaccagatgatcgcccgcaatgaagatgaatttgagctgtttatgcgcatg
gacatggaccgtcgtcgagaagacgccaggaacccaaaacgtaagcctcgcttaatggaa
gaagatgagctgccttcctggatcatcaaggacgatgctgaggtggagaggcttacttat
gaggaagaagaagagaagatgttcggccgcggatcacgctgccgtcgggacgtcgattac
agcgacgccatgaccgaaaagcaatggctgcgagccatcgaagatgggaacttggaagaa
atggaagaggaaatccgcctgaaaaagcgcaaacgcaagcgacgtcaggacaaagactca
tcaagcagagacgatggaggcatgaaggccaagaagagacgagggaggccgccggcagag
aaactctcgcccaacccgcccaaactcaccaagcagatgaacaccatcatcgacacagtg
atcaactacagagatggcaggtcaggaaggcaactgagtgaggtgtttgtgcagcttcca
tccaggaaggagctccctgagtactatgagctaatcagaaaacctgtggacttcaaaaag
atcaaggagcgagtgagaaaccacaaataccgaagtttgggggacctggagaaggacgtg
atgcttctctgtcagaatgcacaaacatttaacctggagggatcccagatataccaggac
tccattgttcttcagtcagttttcaagagtgccagacagaagattgccaaggacgaagac
agtgaggatgacagcgatgaggaagatgatgatgactatgactcagaggctgaggctaag
tctgtgcgggtgaggatcaagctgggcagggagggacgcagccacgacaaaggcaagaag
aggcaaagccgcggaaaggccaagccggtggtcagcgacgatgacagtgacgacgaccag
gatgataacgatcagtcggacaagagcaaaagtgacgaggactga
DBGET
integrated database retrieval system
