Cyprinodon tularosa (White Sands pupfish): 119792004
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Entry
119792004 CDS
T07496
Symbol
hcfc1b
Name
(RefSeq) host cell factor 1b
KO
K14966
host cell factor 1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03083
Polycomb repressive complex
ctul04980
Cobalamin transport and metabolism
ctul05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
119792004 (hcfc1b)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
119792004 (hcfc1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119792004 (hcfc1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ctul01009
]
119792004 (hcfc1b)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ctul03036
]
119792004 (hcfc1b)
03029 Mitochondrial biogenesis [BR:
ctul03029
]
119792004 (hcfc1b)
Protein phosphatases and associated proteins [BR:
ctul01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119792004 (hcfc1b)
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
119792004 (hcfc1b)
HMT complexes
COMPASS/SET1 complex
119792004 (hcfc1b)
MLL-HCF complex
119792004 (hcfc1b)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
119792004 (hcfc1b)
Mitochondrial biogenesis [BR:
ctul03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
119792004 (hcfc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
119792004
NCBI-ProteinID:
XP_038154355
LinkDB
All DBs
Position
Unknown
AA seq
1427 aa
AA seq
DB search
METLNETPTVLQPRWKRVLGWTGPVPRPRHGHRAVSIKELMVVFGGGNEGIVDELHVYNT
ATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNELYELQASRWEWKRLK
AKPPKRGPPPCPRLGHSFSLIGSRCYLFGGLANDSEDPKNNIPRYLNDLYCLELRPGSTV
VSWEIPPTSGPPPPPRESHTAVMTTKGGVSRLIIYGGMNGCRLGDLWVLDLESLVWSQPA
LSGTPPLPRSLHSATVINNKMYVFGGWVPLLGDDIKMGTHEKEWKCTNNLACLNLETMSW
ETVLMDGDEENLPRARAGHCSVAINSRLYIWSGRDGYRKAWNNQVCCKDLWYLETECPVA
PSRVQLVRANTTSLEVSWGPSKTADTYLLQLQRYDIPAGPAPGAAPPSLAPPSQAVPAPG
SAPGSPSAADAKAVLRLSAAPSAAGGGVRLAAPKTPVTMATLPAGVRVAVPAQPSQVAIG
SGPQMSGMAALAAAAAVTQKIPPSTAPVLGLPAGGGAVKIVNNSAARLLKTAAAQVGGAS
VASAAGTPKRPIITVHKSGSVTVSPQPQVVTTVVGGVTKTITIVNSPISLGGGGALIGNL
GNLGKVVSMVQTRTVQSGAVTGQAGSNPVSQILQTKGALPAGTILKLVTSADGKQTAILS
TAQAGSTANKPTIIKTIPLSALQGAAGGNSPITILTTKVGTAGTERLISAVPRMSAGVQQ
GVTQVVLKGAPGMGGTILRTVPMSGLRLVSPAPGGSSPAVTTLVMKGTSGVASLSTATGS
ISAANASLTTPITTLTSLASQVTTATAPTSGPRQVTLITTPSGAEPQPLVQDLPVSIMAS
PTSEETGNTTGSTTTTNAEGDAATVTLVCSNPPCETHETGTTNTATTAGAGGLRQVCSNP
PCETHETGTTNTATTAGAGGLRQVCSNPPCETHETGTTNTATTATAQQSGETPQGDSTDS
APSSDPASAVSHSTALTTVTHATPAPGPAVPEISSLVGAERMETSETLIMVPREEEEPTL
TDSQSEGVVSSGASSLQVQMASSDEGLPQQLMSSEGDGGEDVSRTMTLTLTPGLVQDQLA
VTMATGEGASQVALQAAGPVGEANQPSDQPFRIVLTPQELAALVQQQQEAEPEPSSVPTE
GLAPADSLNDPSAESHGHQLPTSAVISAVARLASTFSPTPTMAEGQAKSTAVTTPMATSN
GIREPPIEQRVRTAPKENPWFDVGIMKVTNAVVTHYYVPYDDGAVEDYATSVPDYSQMRR
VELQPGTAYKFRVAGINICGRGAFSEVSAFKTCLPGFPGAPCAIKISKNLDGAQLTWEPP
AVTAGTITEYSVYLAIQSSQAKSPASGSGPAQLAFMRVYCGSDPRCLVQASSLANAHIDY
TTKPAVIFRIAARNQKGYGPATQVRWLQETSKDSKAASKRSGPSQDM
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atggagaccctgaatgagacccccactgtgctacagccccgctggaagcgggttctgggc
tggaccgggccggttccgcggccgcggcacggccaccgggccgtgtccattaaggagctc
atggttgtgttcggaggagggaacgagggaatcgtggatgagctacacgtctacaataca
gctaccaaccagtggttcatcccggcggtccgtggcgacatcccgccgggctgcgcggcc
tacggctttgtctgcgacgggacgcgcctgctggtgttcggagggatggtggagtacggg
aagtacagcaacgagctgtacgagctgcaggccagccgctgggagtggaaacgtctgaag
gccaaacccccaaagagaggcccacccccgtgcccccgcctcggacacagcttctccctg
attggctcccggtgttacctgttcggtggcctggccaatgacagcgaggacccaaaaaac
aacattcccaggtacctgaacgacctgtactgtctggagctgagacccggctccacggtg
gtcagctgggagatcccgcccacatccgggccgccgccgccccccagggagagtcacacg
gcagtgatgacgaccaagggcggagtcagcaggctgatcatctacggcgggatgaacggt
tgccggctgggagacctctgggtcctggacttagagtctttggtgtggagccaaccagct
ctcagtgggacgccgcccctcccccgcagcctgcattctgccaccgtcatcaacaacaag
atgtacgtgttcggaggatgggtccctctgctgggggatgacatcaagatggggacgcat
gagaaggagtggaagtgcaccaacaatctggcctgcctcaacctcgagacgatgagctgg
gagacggttctgatggacggcgatgaggagaacctgcccagagctcgggccggtcactgc
agcgtggccatcaactccagactctacatctggagcggccgggacgggtaccggaaggcc
tggaacaaccaggtctgctgcaaagacctgtggtacctggagacagagtgtccagtggcg
ccgtcccgggtgcagctggtccgggccaacaccacgtccctggaggtgagctggggtccg
tctaagaccgcagacacgtacctcctgcagctgcagaggtacgacattccagccggcccc
gcccccggtgccgcccctccttccctggctccacctagccaggccgtcccggcgccgggt
tctgctcctggaagcccgtcggctgcagacgccaaagcggtcctgaggttgtcagcagct
ccgagtgcggcaggggggggcgtcagactggccgcgccaaaaacccctgtgaccatggca
acgcttcctgctggtgtccgtgtggcggttcctgctcagcccagtcaggtggcgataggt
agcggccctcagatgagtggcatggcggcactggcggcggcggcagcagtgactcagaag
atccctccgtccacggcgccggtcctcggcctaccagcagggggcggcgcggtgaagatt
gtgaacaactcggcagcgcgtctcctgaagacggccgccgctcaggtgggcggggcttca
gtggcgtccgctgcggggactcccaaacggccaatcatcacggtgcataagtcgggctcg
gtgacggtctccccacagcctcaggtggtcactacagtggtgggcggagtcacaaagacc
atcaccattgtcaacagtcccatcagcctgggaggaggcggagctttgatcggtaacctt
ggaaacctggggaaggtggtgtcgatggtccagaccaggacggtccagagcggagcggtt
acaggtcaggctgggagcaacccggtctctcagatccttcagacgaagggcgctctgccc
gcgggaaccatcctgaagctggtgacctcagcagatgggaagcagacggccatcctcagc
acggcgcaggccggatccaccgccaacaaacccaccatcatcaagaccatcccgctgtcg
gctctgcagggagcagcaggtgggaacagtccgattaccatcctgaccaccaaggtggga
accgcgggaacggagaggttgatcagtgccgtccccaggatgtctgcgggcgtccagcag
ggcgtcacacaggtggtgttaaaaggagcgcccgggatgggcggtaccatcctcagaacc
gtccccatgagcggactgagactggtgtctccagcacccggcggaagcagccctgctgtc
accacgctggtcatgaaggggacctcaggggtcgccagtctgagcacagccacaggaagc
atctccgctgccaacgcctccttgaccacacccatcactactctgacgtcgctggccagc
caggttaccacagcaaccgcccccacctcaggacccagacaggtgactctgatcacaacg
ccaagcggtgccgagccccaaccgctggtccaggacctgcccgtctccatcatggcctct
ccgacgtcagaggaaacggggaatactacaggaagtaccacgaccaccaacgctgaggga
gacgcagccacagtgactctggtctgctccaacccaccgtgtgagacccacgagaccgga
accaccaacaccgccaccacagctggagctggaggactccgacaggtgtgctccaaccca
ccgtgcgagacccacgagaccggaaccaccaacaccgccaccacagctggagctggagga
ctccgacaggtgtgctccaacccaccgtgcgagacccacgagaccggaaccaccaacacc
gccaccacagccacagctcaacagagtggagaaactccgcaaggagactccacagactcc
gccccctcatctgatcccgcctctgctgtcagtcacagcacagcattaactaccgtaacg
catgcaacgccggccccgggtccagcagtaccggaaatctcctcgttggttggagctgag
aggatggagacctcagagacgctcatcatggtgccacgagaagaggaggagccaacactg
acagacagccaatcggagggcgtggtgtcatcgggggcgtcgtcgttacaggttcagatg
gcctcctcagatgaaggtcttcctcagcaactgatgtcatcagagggggacggaggtgag
gatgtctccaggacgatgacccttacgttgacgccaggactggtccaagatcagctggca
gttactatggcgaccggcgaaggagcctcacaggtggcgctgcaagcggctgggcccgtc
ggtgaggctaaccaaccgagcgatcagccgttccgcattgttctgacacctcaggaactg
gcggcgctggtccagcagcagcaggaagcagaaccagagcccagcagcgttcccacagag
ggcctcgctccagccgacagcctgaacgacccgagcgcagagagccacggacaccagctc
cccacctcagccgtgatcagcgccgtcgctcgattagccagcacgtttagccccaccccc
acgatggcggagggccaggcgaagagcacagctgtcaccacgcccatggcgacgtccaat
ggcattagggaacctccaattgaacagcgagtcaggacagcgccgaaggagaacccgtgg
tttgacgtcggcatcatgaaggtcaccaacgctgtggtaacacattactacgtcccctac
gacgacggcgcggttgaggattacgcgacttcggtgccagattatagtcagatgaggcgg
gtggagctgcagcctggcactgcctataagttccgggtcgcagggatcaacatctgcggc
cgcggcgccttctccgaggtgtcggcgtttaaaacctgcctccctggattccctggagcg
ccgtgcgccattaagataagcaagaacctggacggggcccagctcacctgggagcccccc
gccgtcaccgcgggaaccatcacagagtactcggtgtacctggccatccagtccagccag
gccaagtcgcccgcttctggttccggcccggcccagctggccttcatgagggtgtattgt
ggctcggacccgcgctgcctggttcaggcatccagcctggccaacgcccacatcgactac
accaccaagcccgccgtcatcttccgcatcgccgctcggaaccagaagggctacgggccg
gccacgcaggtccgatggctacaagaaaccagcaaggactccaaagcagcgtccaagaga
agcggaccttctcaggacatgtag
DBGET
integrated database retrieval system
