Cyprinodon tularosa (White Sands pupfish): 119792026
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Entry
119792026 CDS
T07496
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119792026 (hspd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctul03019
]
119792026 (hspd1)
03110 Chaperones and folding catalysts [BR:
ctul03110
]
119792026 (hspd1)
03029 Mitochondrial biogenesis [BR:
ctul03029
]
119792026 (hspd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ctul04147
]
119792026 (hspd1)
Enzymes [BR:
ctul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
119792026 (hspd1)
Messenger RNA biogenesis [BR:
ctul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
119792026 (hspd1)
Chaperones and folding catalysts [BR:
ctul03110
]
Heat shock proteins
HSP60 / Chaperonin
119792026 (hspd1)
Mitochondrial biogenesis [BR:
ctul03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
119792026 (hspd1)
Exosome [BR:
ctul04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119792026 (hspd1)
Exosomal proteins of other body fluids (saliva and urine)
119792026 (hspd1)
Exosomal proteins of breast cancer cells
119792026 (hspd1)
Exosomal proteins of colorectal cancer cells
119792026 (hspd1)
Exosomal proteins of bladder cancer cells
119792026 (hspd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
119792026
NCBI-ProteinID:
XP_038154399
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MFRLPTVMKQVRPVCRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKSIDLKDRYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDNISKGANPVEIRRGVMMAVETVINELKNLSKPVTTPEEIAQVATISANGDV
EIGNIISNAMKRVGRKGVITVKDGKTLQDELEIIEGMKFDRGYISPYFINTAKGQKCEFQ
DAYLLLSEKKISSVQSIVPALEIANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAVATGGTVFGDEALGLALEDIQAHDFGRVGEVQITKDDTLLLKG
GGSPADVEKRAAEIVEQLENTTSDYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRCIPALDALKTANSDQKIGVDIIRRSLRIPAMTIA
KNAGVEGSLVVEKILQGAPEMGYDAMQGEYVNMVEKGIIDPTKVVRTALMDAAGVASLLS
TAEAVVTEIPKEEKEMPGGMGGMGGMGGMGGGMGF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtttacctaccgtcatgaagcaggtgaggcccgtgtgccgggcgctggctcct
cacctcacccgggcgtacgccaaggacgtaaagtttggggcggacgctcgcgccctcatg
ctgcagggggtggacctgctggccgacgccgtggccgttaccatggggccaaagggtcgc
accgtcatcatcgagcagagctggggcagtccgaaggtgaccaaggacggcgtgacggtg
gctaaaagcatcgacctgaaggacagatacaagaacatcggagccaagctggtgcaggac
gtggccaacaacaccaacgaggaggccggcgacggcaccaccacggccacggtgctggcg
cgggccatcgccaaggagggcttcgacaacatcagcaaaggcgccaatcccgtggagatc
cgccgtggtgtcatgatggccgtggagacggtcatcaatgagctgaagaacctctctaag
cccgtcacgacccccgaggagatcgcacaggtcgctaccatctctgccaacggcgacgtg
gaaatcgggaacattatttccaacgccatgaagagagtcggccgcaaaggcgtcatcacc
gtgaaggacgggaagacgctgcaggacgagctggagatcatcgagggcatgaagttcgac
cgtggttacatctctccgtacttcatcaacacggctaaaggccagaagtgcgagttccag
gacgcctacctgctgctgagcgagaaaaagatttctagcgtccagagcatcgtgcccgcc
ctggagatcgccaaccagcatcgcaaacctctggtgattgtagccgaggatgtggacgga
gaagcgctgagcactctggttctgaacaggctgaaggttggactccaggtggtcgccgtc
aaagctccaggtttcggggacaacaggaagaaccagctgaaggacatggccgtcgccacc
ggcggcacggtgtttggcgatgaggctctcggtctggccctggaggacatccaagctcac
gacttcggcagagtgggcgaagtccagatcactaaagacgacaccctgctactgaagggc
ggcggcagccccgccgacgtcgagaagcgggcggctgagatcgtagagcagctggagaac
accaccagcgactacgagaaggagaagctcaacgagaggctggcgaagctgtctgacggc
gtggccgtcctcaaggtgggaggaaccagcgacgttgaggtgaacgagaagaaggaccga
gtgacagatgctctgaacgccacccgggccgctgtggaggagggcatcgttcccggcgga
ggatgcgctctgctgcgctgcatccccgccctggacgccctgaagaccgccaacagcgac
cagaagatcggtgtggacatcatcaggcggtcgctgcgtatccccgccatgaccatcgcc
aagaacgccggcgtggagggctccctggtggtggagaagatcctgcagggggcgccggag
atgggctatgacgccatgcagggggagtacgtcaacatggtggagaagggcatcatcgac
cccactaaggtggtacggaccgcgctgatggacgccgcaggagtcgcctctcttctttcc
accgccgaggccgtcgtcacagagatccctaaggaggaaaaagagatgccaggaggcatg
ggcggcatggggggtatgggaggaatgggaggcggcatgggcttctga
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