Cyprinodon tularosa (White Sands pupfish): 119792267
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Entry
119792267 CDS
T07496
Symbol
smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119792267 (smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctul03021
]
119792267 (smarcd2)
03036 Chromosome and associated proteins [BR:
ctul03036
]
119792267 (smarcd2)
Transcription machinery [BR:
ctul03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119792267 (smarcd2)
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119792267 (smarcd2)
PBAF complex
119792267 (smarcd2)
GBAF(ncBAF) complex
119792267 (smarcd2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIFT
SWIB
SWIB_eIF2D
Motif
Other DBs
NCBI-GeneID:
119792267
NCBI-ProteinID:
XP_038154765
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MTSRGGFPAPQLNPTVSPMSVGHVGAMRMPGMPQLPAGYSRSMSSNPQYHQRSGMLPSRM
GGLLGSMGGQMPGPSYGSGSIPMRPGISHPSMDPSRKRFLHQQQQQETLGGMRRGAKRRK
MADKVLPQRIRDLVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPIMQKRKLRIYIS
NTYTPSKPEGEESEKVSSWELRVEGKLLEEPGKQKKKFSSFFKSLVIELDKELYGPDNHL
VEWHRMPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRANI
MQALWIYIKNNKLQDGHEKEYINCNRYFRQIFGCQRMKFSEIPMKLAGLLHHPDPIIINH
IISVDPTDQKKTACYDIDVEVDDPLKAQMNSFLSSTTNQQEIAALEMKIHETIEYINQLK
TERDFMLSFSNNPQEFIKDWLKSQCRDLKLMTDVTGNPEEERRTEFYQAPWVPEAVGRYV
YSKVQQRRQELEQVLGIRLT
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgacatccagagggggcttccctgctcctcagttgaatccgaccgtgagccccatgagt
gtcggtcacgtcggggccatgaggatgcccgggatgccgcagcttcccgcgggttactcc
cgcagcatgagcagcaacccccagtaccaccagcggtccgggatgctgcccagcagaatg
gggggtctcctagggtcgatggggggtcagatgccaggtccttcatacggtagtggcagt
attcctatgcggccaggcataagccatcccagcatggatccttccaggaagcgcttcctt
catcagcagcagcagcaggagacgcttggaggcatgagaagaggagcaaaacgacgcaaa
atggctgacaaggttcttccacagaggatacgagacctggtcccagagtctcaggcttac
atggatcttctggcctttgagaggaagctggatcagaccattgctcgaaaacggatggag
attcaggaggccatcaaaaagcccatcatgcaaaagcgtaaactccggatctacatttct
aacacttacactcccagcaagcctgagggtgaggaatctgagaaagtgtcctcctgggag
ctgagagtggaaggcaaactcttggaggaacctggtaagcagaagaagaagttctcctct
ttcttcaaaagtctcgtgattgagctcgataaggagctttatggacccgacaatcaccta
gtagagtggcacaggatgcccaccactcaggagacagatggtttccaggtcaaaaggcct
ggagatgtgaatgtcaaatgcactcttctgctcatgcttgaccatcagcctccgcagtat
aaactggaccctcgtttggctcgtctccttggcgtgcacacgcagactcgggccaacatc
atgcaagctctctggatctacatcaagaacaacaagttgcaggacggtcatgagaaggag
tacatcaactgcaatcgctacttcagacagatctttggctgtcaacgcatgaagttctct
gagattccaatgaagctggcgggcctgctgcatcaccccgaccccatcatcatcaatcac
atcatcagtgtggaccccacagaccagaagaagacggcttgttatgatattgatgtggaa
gtagacgaccctctgaaagcccagatgaacagctttctgtcctccaccaccaaccaacag
gaaattgccgctctagaaatgaagattcatgaaacaatagagtacattaaccagcttaaa
acagagagagactttatgctgagcttcagcaataatcctcaagagttcatcaaggactgg
ctcaagtctcagtgccgagatctgaagttgatgacagatgtaacgggaaacccagaggaa
gagcgcaggacagagttttatcaggcaccatgggttccagaagcagtgggtcgatatgtt
tattccaaagtgcagcagaggagacaagagttggagcaggtgttgggcatccgactaacc
taa
DBGET
integrated database retrieval system
